| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221824
Identifier: 183221824
GI number: 183221824
Start: 2536393
End: 2537742
Strand: Direct
Name: 183221824
Synonym: LEPBI_I2455
Alternate gene names: NA
Gene position: 2536393-2537742 (Clockwise)
Preceding gene: 183221819
Following gene: 183221830
Centisome position: 70.46
GC content: 35.93
Gene sequence:
>1350_bases ATGTGCGATACCTCTCTTGCCACTGAAAAATTTACAAAAACACAAAAAAGAATCTTTGCCAAAAACTCCGACAGGGAACC AAACGAAGCCCAATCGATTCTCCATGTGCCGCGGATGGAACACCCCAAAGATTCTATTTTAAAAACCACATACATTGAAA TTCCGCAAACTTCCACTACGTTTGAAATCTTCCTATCAAAACCATTTCATATGTGGGGTGCTGAAATGGGTATAAATGAA TTTGGAGTGTGCATTGGAAACGAAGCTGTCTTCACCAATCTAAAGATATCTAAAATGAACAATGGGTTAACGGGTATGGA TTTAATTCGTTTGGCATTGGAACGATCTAAAACAGCGAAGGACGCCTTATTTTTAATTACCGAATTGTTGGAAAAATATG GGCAAGATGCCTGCGGAGGGTATCAAAATAAAACTTTTTTCTATCACAATAGTTTTATCATAGCGGATCGTACAGATGGT TATGTATTAGAAACTGCTGACCGATACTGGGTAGCAAAAAAGATCGATTCATTTTATGCAATTTCGAATGGATTAACAAT CGAATCTGATTTTGAGTATTCATCTACTAACTTAATTGAAAAATTAAAATATAAATCGAAAAAGGATTTTTCATTTAAGG ATTGTTTTAGCGATACATTTTATACGTATATGAGCCATTGTAAAGATAGGAGGCATCTACATAAAGCTACAGCTGAACAA TACTTAAATACGCATACATCCTATAACTCAAAACAGGCGATCGAAACATTGAAGACACATCCCATTGATTCTGATGAATT TGAACCAAATCATTCTTCAATGAAATCACTTTGTTTACATGCAACTGGCCCAACCACTCCAAACCAAACCAACGGGAGTT TAGTTGTCGAATGGGACACTTCCGAAACAAACCAAGATCCTTTGCGAGTTTATTATACTGGGACTTCCACTCCTTGTTTG AGTTTGTTTAAACCATTTTTCTTTGGAACAAAAAACTTGATCAATGCATCCAGTTTGGATTCGAGTGGGACATATTCTGA TACTTTGTGGTGGTTACATGAATCAATTGCAAGAAAATCAAATTTTGATTACCAAGGAGTAAGATCAATTCTTGTACCTT CTCTTGTTGGTTTACAAGAATCAGTGTTTTCCTTAACAAACGAATCACTCCCAATGCAAAAAAAAGAAGACTTACAATGG CATTTTCTCAAAGACCATGTAAACGTCCTAAAACAAATCGACGATGAGTTATTAGCGTCAAAAATTGGAAGTAGTAGATG GCAAAATCCGTTGTTCCAAATCTATTGGAGTGGGCAGAATTCAAATCTAGGATTCCGAACCTTCAACTAA
Upstream 100 bases:
>100_bases TAATCCCAATTCAATGTATTCAAAGATTTGTTTAGGTATTGATTGCATTTTGTTTTTAATTTTGGATTGAATTATTTAGA TTTCAGATTAACATTCTAGA
Downstream 100 bases:
>100_bases CAAGATTAATATGTCATTGACATTCGTACCAGTGGGTCCTGTCATAACGAGTGCATTTACATCTTTTAGAATTGGATAAG AATTTGAATCTTCCAATTGA
Product: putative peptidase
Products: NA
Alternate protein names: Dipeptidase-Like Protein; Peptidase Family C
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MCDTSLATEKFTKTQKRIFAKNSDREPNEAQSILHVPRMEHPKDSILKTTYIEIPQTSTTFEIFLSKPFHMWGAEMGINE FGVCIGNEAVFTNLKISKMNNGLTGMDLIRLALERSKTAKDALFLITELLEKYGQDACGGYQNKTFFYHNSFIIADRTDG YVLETADRYWVAKKIDSFYAISNGLTIESDFEYSSTNLIEKLKYKSKKDFSFKDCFSDTFYTYMSHCKDRRHLHKATAEQ YLNTHTSYNSKQAIETLKTHPIDSDEFEPNHSSMKSLCLHATGPTTPNQTNGSLVVEWDTSETNQDPLRVYYTGTSTPCL SLFKPFFFGTKNLINASSLDSSGTYSDTLWWLHESIARKSNFDYQGVRSILVPSLVGLQESVFSLTNESLPMQKKEDLQW HFLKDHVNVLKQIDDELLASKIGSSRWQNPLFQIYWSGQNSNLGFRTFN
Sequences:
>Translated_449_residues MCDTSLATEKFTKTQKRIFAKNSDREPNEAQSILHVPRMEHPKDSILKTTYIEIPQTSTTFEIFLSKPFHMWGAEMGINE FGVCIGNEAVFTNLKISKMNNGLTGMDLIRLALERSKTAKDALFLITELLEKYGQDACGGYQNKTFFYHNSFIIADRTDG YVLETADRYWVAKKIDSFYAISNGLTIESDFEYSSTNLIEKLKYKSKKDFSFKDCFSDTFYTYMSHCKDRRHLHKATAEQ YLNTHTSYNSKQAIETLKTHPIDSDEFEPNHSSMKSLCLHATGPTTPNQTNGSLVVEWDTSETNQDPLRVYYTGTSTPCL SLFKPFFFGTKNLINASSLDSSGTYSDTLWWLHESIARKSNFDYQGVRSILVPSLVGLQESVFSLTNESLPMQKKEDLQW HFLKDHVNVLKQIDDELLASKIGSSRWQNPLFQIYWSGQNSNLGFRTFN >Mature_449_residues MCDTSLATEKFTKTQKRIFAKNSDREPNEAQSILHVPRMEHPKDSILKTTYIEIPQTSTTFEIFLSKPFHMWGAEMGINE FGVCIGNEAVFTNLKISKMNNGLTGMDLIRLALERSKTAKDALFLITELLEKYGQDACGGYQNKTFFYHNSFIIADRTDG YVLETADRYWVAKKIDSFYAISNGLTIESDFEYSSTNLIEKLKYKSKKDFSFKDCFSDTFYTYMSHCKDRRHLHKATAEQ YLNTHTSYNSKQAIETLKTHPIDSDEFEPNHSSMKSLCLHATGPTTPNQTNGSLVVEWDTSETNQDPLRVYYTGTSTPCL SLFKPFFFGTKNLINASSLDSSGTYSDTLWWLHESIARKSNFDYQGVRSILVPSLVGLQESVFSLTNESLPMQKKEDLQW HFLKDHVNVLKQIDDELLASKIGSSRWQNPLFQIYWSGQNSNLGFRTFN
Specific function: Unknown
COG id: COG4690
COG function: function code E; Dipeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI222537732, Length=321, Percent_Identity=38.006230529595, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI222537730, Length=321, Percent_Identity=38.006230529595, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI38504671, Length=333, Percent_Identity=35.7357357357357, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI302058287, Length=331, Percent_Identity=34.7432024169184, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI224465194, Length=319, Percent_Identity=31.0344827586207, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI224465187, Length=319, Percent_Identity=31.0344827586207, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI224465190, Length=319, Percent_Identity=31.0344827586207, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI224465192, Length=273, Percent_Identity=30.4029304029304, Blast_Score=117, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51464; Mature: 51464
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDTSLATEKFTKTQKRIFAKNSDREPNEAQSILHVPRMEHPKDSILKTTYIEIPQTSTT CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHEEEEEEECCCCCCE FEIFLSKPFHMWGAEMGINEFGVCIGNEAVFTNLKISKMNNGLTGMDLIRLALERSKTAK EEEEECCCHHHHHHHCCCCCCCEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCHHH DALFLITELLEKYGQDACGGYQNKTFFYHNSFIIADRTDGYVLETADRYWVAKKIDSFYA HHHHHHHHHHHHHCCHHCCCCCCCEEEEECEEEEEECCCCEEEECCCHHHHHHHHHHHHE ISNGLTIESDFEYSSTNLIEKLKYKSKKDFSFKDCFSDTFYTYMSHCKDRRHLHKATAEQ ECCCCEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLNTHTSYNSKQAIETLKTHPIDSDEFEPNHSSMKSLCLHATGPTTPNQTNGSLVVEWDT HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEECCCCCCCCCCCCEEEEEECC SETNQDPLRVYYTGTSTPCLSLFKPFFFGTKNLINASSLDSSGTYSDTLWWLHESIARKS CCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC NFDYQGVRSILVPSLVGLQESVFSLTNESLPMQKKEDLQWHFLKDHVNVLKQIDDELLAS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KIGSSRWQNPLFQIYWSGQNSNLGFRTFN HHCHHHHCCCEEEEEECCCCCCCCCEECC >Mature Secondary Structure MCDTSLATEKFTKTQKRIFAKNSDREPNEAQSILHVPRMEHPKDSILKTTYIEIPQTSTT CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHEEEEEEECCCCCCE FEIFLSKPFHMWGAEMGINEFGVCIGNEAVFTNLKISKMNNGLTGMDLIRLALERSKTAK EEEEECCCHHHHHHHCCCCCCCEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCHHH DALFLITELLEKYGQDACGGYQNKTFFYHNSFIIADRTDGYVLETADRYWVAKKIDSFYA HHHHHHHHHHHHHCCHHCCCCCCCEEEEECEEEEEECCCCEEEECCCHHHHHHHHHHHHE ISNGLTIESDFEYSSTNLIEKLKYKSKKDFSFKDCFSDTFYTYMSHCKDRRHLHKATAEQ ECCCCEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLNTHTSYNSKQAIETLKTHPIDSDEFEPNHSSMKSLCLHATGPTTPNQTNGSLVVEWDT HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEECCCCCCCCCCCCEEEEEECC SETNQDPLRVYYTGTSTPCLSLFKPFFFGTKNLINASSLDSSGTYSDTLWWLHESIARKS CCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC NFDYQGVRSILVPSLVGLQESVFSLTNESLPMQKKEDLQWHFLKDHVNVLKQIDDELLAS CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KIGSSRWQNPLFQIYWSGQNSNLGFRTFN HHCHHHHCCCEEEEEECCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA