| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221784
Identifier: 183221784
GI number: 183221784
Start: 2487129
End: 2488256
Strand: Direct
Name: 183221784
Synonym: LEPBI_I2414
Alternate gene names: NA
Gene position: 2487129-2488256 (Clockwise)
Preceding gene: 183221783
Following gene: 183221785
Centisome position: 69.09
GC content: 39.45
Gene sequence:
>1128_bases ATGAAACAACGGACATCGATTTTATTTTTCTGCATCGTCATTTTAGGACAAATCGGTTGTGCGAGTGTAATGGTATCAAA CTGGGCACCTGATGAAACCAATTTCAAATCAAGACCAGTGCGTGTGCTCTTGGGTTTTGCAAGTGAAGAAGAAATTTTCA AAACTTCCGGTGAGATCATTGTAAAAGATGCCAATGACTTAACTATCAAAAAAGCCTATGACTTTTTATCCTTAAATCCT ACAGCCATCAAAGCTCCAATTTCCATTCAAAGTAATGCAGAATGGATTGAATACAAAGGTGTGAGCTATCGTGGCACGGT TTTACTAAAACCCTTTGATGGAAAAGTTTATATCATTAATTTAGTTCCAGTCGAATTATACCTACTCTCTGTTGTCCCTT CGGAAGTCAGTGCATCATGGCCGAAAGAGGCGCTGAAGGCCCAAGCCATTTGTGCAAGGACCTATGTAGTCAAAGAAATG TTAAACCGAAAAAAGCAAGAATATGATGTAGACACTTCTACCAATACACAAGTTTATAAAGGCAAAAACAAAGAACATAA AAACACAACAGAAGCAGTATTTGAAACCGAAGGATTAATTTTGATCCATAAAGGACAACCCATTCAAAGTTTTTTCCATT CCAACGCGGGTGGGTATACCGAGGACCCGGCGAATGTTTGGGGGAACTCCGTAGAATACTTAAAACCCGTTCCATCAGAA TATGATAAAGATGGTGATCAGTATTCTTGGGAAGAAAAATGGAAAACTGATTATGTAAATAACAGCTTACGTGACTTAGG TGTAGGTGAAATCCAAGATATCATTGTCGCAAGTCGGTTCCCAACATCTCGAGTGAATGAATTGGAAATCATTGGAACGT CAGGCAGTAAACGAATCAAAGCCACCGAATTTCGAAAAAAAATTGGGGCCACAAAACTGAAATCCACTCGATTTGGAATT CGAAAAGAAGAGTCGGGCGATTTTTATGTGAAAGGGTTGGGTTCAGGGCATGGAGTGGGAATGTCCCAATGGGGAAGTTT CGCGATGGCAAAAAGCCAATTCAATCACAAAGAAATATTACAACATTACTTCAAAGGAATCGAATTCGCGAGAATCGTCG CCAGATAA
Upstream 100 bases:
>100_bases ATACACCGCATACGGAATCGGTGCTTTTCTTTCGCAGAAAACATAGATAAAATCCCTTTACCGATTTTCTGATTCTTCCG AATAGAATAAGGAGGGAACT
Downstream 100 bases:
>100_bases AGCGTAGTTTTTGGTTTCCATCGTCAGAAGATTTTAAATTCTGGCGTTAGGTTCAAAAAACGTATGGCAACACTGGAAGA ATACCTATCCCAAATCAAAG
Product: putative signal peptide
Products: NA
Alternate protein names: H-34 [H]
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKQRTSILFFCIVILGQIGCASVMVSNWAPDETNFKSRPVRVLLGFASEEEIFKTSGEIIVKDANDLTIKKAYDFLSLNP TAIKAPISIQSNAEWIEYKGVSYRGTVLLKPFDGKVYIINLVPVELYLLSVVPSEVSASWPKEALKAQAICARTYVVKEM LNRKKQEYDVDTSTNTQVYKGKNKEHKNTTEAVFETEGLILIHKGQPIQSFFHSNAGGYTEDPANVWGNSVEYLKPVPSE YDKDGDQYSWEEKWKTDYVNNSLRDLGVGEIQDIIVASRFPTSRVNELEIIGTSGSKRIKATEFRKKIGATKLKSTRFGI RKEESGDFYVKGLGSGHGVGMSQWGSFAMAKSQFNHKEILQHYFKGIEFARIVAR
Sequences:
>Translated_375_residues MKQRTSILFFCIVILGQIGCASVMVSNWAPDETNFKSRPVRVLLGFASEEEIFKTSGEIIVKDANDLTIKKAYDFLSLNP TAIKAPISIQSNAEWIEYKGVSYRGTVLLKPFDGKVYIINLVPVELYLLSVVPSEVSASWPKEALKAQAICARTYVVKEM LNRKKQEYDVDTSTNTQVYKGKNKEHKNTTEAVFETEGLILIHKGQPIQSFFHSNAGGYTEDPANVWGNSVEYLKPVPSE YDKDGDQYSWEEKWKTDYVNNSLRDLGVGEIQDIIVASRFPTSRVNELEIIGTSGSKRIKATEFRKKIGATKLKSTRFGI RKEESGDFYVKGLGSGHGVGMSQWGSFAMAKSQFNHKEILQHYFKGIEFARIVAR >Mature_375_residues MKQRTSILFFCIVILGQIGCASVMVSNWAPDETNFKSRPVRVLLGFASEEEIFKTSGEIIVKDANDLTIKKAYDFLSLNP TAIKAPISIQSNAEWIEYKGVSYRGTVLLKPFDGKVYIINLVPVELYLLSVVPSEVSASWPKEALKAQAICARTYVVKEM LNRKKQEYDVDTSTNTQVYKGKNKEHKNTTEAVFETEGLILIHKGQPIQSFFHSNAGGYTEDPANVWGNSVEYLKPVPSE YDKDGDQYSWEEKWKTDYVNNSLRDLGVGEIQDIIVASRFPTSRVNELEIIGTSGSKRIKATEFRKKIGATKLKSTRFGI RKEESGDFYVKGLGSGHGVGMSQWGSFAMAKSQFNHKEILQHYFKGIEFARIVAR
Specific function: Might be involved in sporulation [H]
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013486 - InterPro: IPR013693 [H]
Pfam domain/function: PF08486 SpoIID [H]
EC number: NA
Molecular weight: Translated: 42201; Mature: 42201
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRTSILFFCIVILGQIGCASVMVSNWAPDETNFKSRPVRVLLGFASEEEIFKTSGEII CCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCEE VKDANDLTIKKAYDFLSLNPTAIKAPISIQSNAEWIEYKGVSYRGTVLLKPFDGKVYIIN EECCCCEEEEHHHHHEECCCCEEEECEEECCCCCEEEECCCEEECEEEEEECCCCEEEEE LVPVELYLLSVVPSEVSASWPKEALKAQAICARTYVVKEMLNRKKQEYDVDTSTNTQVYK ECHHHHHEEHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE GKNKEHKNTTEAVFETEGLILIHKGQPIQSFFHSNAGGYTEDPANVWGNSVEYLKPVPSE CCCCCCCCHHHHHEECCCEEEEECCCHHHHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCH YDKDGDQYSWEEKWKTDYVNNSLRDLGVGEIQDIIVASRFPTSRVNELEIIGTSGSKRIK HCCCCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCH ATEFRKKIGATKLKSTRFGIRKEESGDFYVKGLGSGHGVGMSQWGSFAMAKSQFNHKEIL HHHHHHHHCCHHHHHHHCCCEECCCCCEEEEECCCCCCCCHHHHCCHHHHHHCCCHHHHH QHYFKGIEFARIVAR HHHHCCCHHHHHHCC >Mature Secondary Structure MKQRTSILFFCIVILGQIGCASVMVSNWAPDETNFKSRPVRVLLGFASEEEIFKTSGEII CCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCEE VKDANDLTIKKAYDFLSLNPTAIKAPISIQSNAEWIEYKGVSYRGTVLLKPFDGKVYIIN EECCCCEEEEHHHHHEECCCCEEEECEEECCCCCEEEECCCEEECEEEEEECCCCEEEEE LVPVELYLLSVVPSEVSASWPKEALKAQAICARTYVVKEMLNRKKQEYDVDTSTNTQVYK ECHHHHHEEHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE GKNKEHKNTTEAVFETEGLILIHKGQPIQSFFHSNAGGYTEDPANVWGNSVEYLKPVPSE CCCCCCCCHHHHHEECCCEEEEECCCHHHHHHHCCCCCCCCCHHHHCCCCCHHHCCCCCH YDKDGDQYSWEEKWKTDYVNNSLRDLGVGEIQDIIVASRFPTSRVNELEIIGTSGSKRIK HCCCCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCH ATEFRKKIGATKLKSTRFGIRKEESGDFYVKGLGSGHGVGMSQWGSFAMAKSQFNHKEIL HHHHHHHHCCHHHHHHHCCCEECCCCCEEEEECCCCCCCCHHHHCCHHHHHHCCCHHHHH QHYFKGIEFARIVAR HHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA