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The map label for this gene is recO

Identifier: 183221473

GI number: 183221473

Start: 2185296

End: 2186045

Strand: Reverse

Name: recO

Synonym: LEPBI_I2091

Alternate gene names: 183221473

Gene position: 2186045-2185296 (Counterclockwise)

Preceding gene: 183221474

Following gene: 183221472

Centisome position: 60.73

GC content: 39.2

Gene sequence:

>750_bases
ATGGCGATTCGAAAAGAAATTGGAATCATCATCCAAAGTAAAGATATAGGGGAAAGCGACAGGCTGATTAGTTTGGCTGG
AGAGACCCAAGTTCGGATGAATTTTATCAGCAAAGGGATACGTAAATCCAAACGGAGAGCCATCATATCCACAGAACTCG
GTTGTCTTGTGGAGGTGGATTATTACGACCAGGTAGAAAAGGATTGGAAATCAACCAAGGAAATCCACCTCATCAAACGA
TACGATGAACTGAAAAAAGACTATGTGGGAACCTTATTTGTTTTGTATCTAACGGAACTCACTTCCCAGTTATACCCCGA
CGGAGAAAACCATCCATTTTTATACCAATTACTTTCTGGCAGTTTGGAGGTAAGTAATGAGAATGGATTCCGCAAAGAAA
TATTACCTTTTTTTAAACTCCGAGCACTCACTCATATGGGCCATTTCCCGACAGAATTTTACTGTCATACCTGCGGGGAG
GAAGTTCTCACGAAAGCAAAGGCTTATTTTTCTGTGGATTCACGTGAATTTTTATGCTCTGATTGCCATCCCATCACCAA
AGATCATTTGCCTGTTTTAAAACTTTTTCATACAATGTTATCTAAGAAATTTTCGAATGTCTTGGTCATCTTCCCAAAAG
AAGCAGAATACCGAGAAGGGGATATGATCCTCAATCAGTTTTTGCGGTCTCTATTGGGAAGGGAGTTAAAGTCTTATTTT
GAATTTTATAAAACGATTGGGGATTTATGA

Upstream 100 bases:

>100_bases
TTTACATAACTTTGGATATGACCATGAGACAAATGAGGAAGATGCTTTGCTCATGAGAAAAATGGAAGATGAATGTTTGG
ATTTGGTTTTTGCAACATAA

Downstream 100 bases:

>100_bases
ATTTTATCATCAAAACCATTCTGCTTGTGATGACCTTTTCGGTATTCCTTGCTCTTTTCCAATTGTTACTCAAATCGGAA
AACCTCAAACAAACATCTTT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAIRKEIGIIIQSKDIGESDRLISLAGETQVRMNFISKGIRKSKRRAIISTELGCLVEVDYYDQVEKDWKSTKEIHLIKR
YDELKKDYVGTLFVLYLTELTSQLYPDGENHPFLYQLLSGSLEVSNENGFRKEILPFFKLRALTHMGHFPTEFYCHTCGE
EVLTKAKAYFSVDSREFLCSDCHPITKDHLPVLKLFHTMLSKKFSNVLVIFPKEAEYREGDMILNQFLRSLLGRELKSYF
EFYKTIGDL

Sequences:

>Translated_249_residues
MAIRKEIGIIIQSKDIGESDRLISLAGETQVRMNFISKGIRKSKRRAIISTELGCLVEVDYYDQVEKDWKSTKEIHLIKR
YDELKKDYVGTLFVLYLTELTSQLYPDGENHPFLYQLLSGSLEVSNENGFRKEILPFFKLRALTHMGHFPTEFYCHTCGE
EVLTKAKAYFSVDSREFLCSDCHPITKDHLPVLKLFHTMLSKKFSNVLVIFPKEAEYREGDMILNQFLRSLLGRELKSYF
EFYKTIGDL
>Mature_248_residues
AIRKEIGIIIQSKDIGESDRLISLAGETQVRMNFISKGIRKSKRRAIISTELGCLVEVDYYDQVEKDWKSTKEIHLIKRY
DELKKDYVGTLFVLYLTELTSQLYPDGENHPFLYQLLSGSLEVSNENGFRKEILPFFKLRALTHMGHFPTEFYCHTCGEE
VLTKAKAYFSVDSREFLCSDCHPITKDHLPVLKLFHTMLSKKFSNVLVIFPKEAEYREGDMILNQFLRSLLGRELKSYFE
FYKTIGDL

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_LEPBA (B0SB31)

Other databases:

- EMBL:   CP000777
- RefSeq:   YP_001963115.1
- ProteinModelPortal:   B0SB31
- GeneID:   6388382
- GenomeReviews:   CP000777_GR
- KEGG:   lbf:LBF_2037
- HOGENOM:   HBG529516
- OMA:   YACELAY
- ProtClustDB:   CLSK574016
- BioCyc:   LBIF355278:LBF_2037-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 29019; Mature: 28888

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRKEIGIIIQSKDIGESDRLISLAGETQVRMNFISKGIRKSKRRAIISTELGCLVEVD
CCCHHHHCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEC
YYDQVEKDWKSTKEIHLIKRYDELKKDYVGTLFVLYLTELTSQLYPDGENHPFLYQLLSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
SLEVSNENGFRKEILPFFKLRALTHMGHFPTEFYCHTCGEEVLTKAKAYFSVDSREFLCS
CEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
DCHPITKDHLPVLKLFHTMLSKKFSNVLVIFPKEAEYREGDMILNQFLRSLLGRELKSYF
CCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EFYKTIGDL
HHHHHHCCC
>Mature Secondary Structure 
AIRKEIGIIIQSKDIGESDRLISLAGETQVRMNFISKGIRKSKRRAIISTELGCLVEVD
CCHHHHCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEC
YYDQVEKDWKSTKEIHLIKRYDELKKDYVGTLFVLYLTELTSQLYPDGENHPFLYQLLSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
SLEVSNENGFRKEILPFFKLRALTHMGHFPTEFYCHTCGEEVLTKAKAYFSVDSREFLCS
CEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
DCHPITKDHLPVLKLFHTMLSKKFSNVLVIFPKEAEYREGDMILNQFLRSLLGRELKSYF
CCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EFYKTIGDL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA