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The map label for this gene is cinA [C]

Identifier: 183221470

GI number: 183221470

Start: 2182008

End: 2183261

Strand: Reverse

Name: cinA [C]

Synonym: LEPBI_I2088

Alternate gene names: 183221470

Gene position: 2183261-2182008 (Counterclockwise)

Preceding gene: 183221471

Following gene: 183221469

Centisome position: 60.65

GC content: 37.16

Gene sequence:

>1254_bases
ATGACTCCTTACATTGTCATTCTATCTACAGGCTCTGAACTCACTGCAGGTAGGAGTGTGGATACAAATTCTGGATGGAT
TGCCAACCAATTGTTTGAACTGGGTTGGAAGGTAAAAAAAATCATCACTTTACCTGATGATCCAAATCTAATTTTCAAAG
AATTAGAAGCCTTACAAAGTCTCGCAAAAGAAATTCCTGTCCTTGCGATAATGACGGGAGGACTAGGTCCGACAGAAGAT
GATTATACATTGGAAACGGTTCTCAAATTAACTGGCAAAACTTCTTATGCAGTTGAAAAAGCAAAAATTCGACTCACTAA
GATTTATGAAGCAAGAGGAAAAGATTACAAAGATATATTACCAACTGTATTCCGCCAAACCAATGTTCCAGAGGGATGTA
AAACACTTGATAATTCAGTAGGCATAGCCGTTGGATTTATCGAAAGTTTAGGAGAAAATTCATACTTGGTTTGTATGCCT
GGTGTTCCATCGGAGATGACCGAAATGTTCAAACGCCGGTTAGTCCCTGAATTAAAAAAAATGTATCCACGTGAGAACTT
AATCCAAAAAACAAAGTGGTTATGGAATATCGGAGAATCTTTATTTCAAAACGAATTCATTGAGCCTAACAGAGAAGTAT
ACTTTAAAGAAACAGAATGGGGAGTTACGGCAAATCGAGGATATATTAAGTGTATTTTTCAGTCAACAAATGATGTTATG
CTTGATACAATCTTAAAAAGTTTAGAAAAACAATATCCAGATTTAATTTCTGATGATGTATTTCAATATGTACATGAACA
ATTGTTATATGAAAAGTGGACCATCTCAGTAGTTGAAAGTTGTACGGGTGGACTTCTCGGGAAAAAACTTACAGAGCGAG
CAGGCTCTAGTGCTTATTTTATGGGTGGTTTTTTAACGTATTCCAATGAAATGAAATCCAACCTACTTGGGATTCCTAAG
GAAACAATCGAAACTTTCGGTGCTGTGAGTGATGAGGTGGCGTTTGCGATGGTGGATGGCCTTTGTTTGAAAACGGGAAC
AGACTTTGGTGTTTCGATTACAGGCATTGCTGGACCAGAAGGTGGAAGTGAAGAAAAACCTGTGGGGACAGTTTGTATTG
GATTAAAAGAGCCAAATGGGAAAATCAAAGTACATAGGTATTTATTTCCTGGAAATCGAGAATCCATTCGTGAGAATGCG
AGTAACACTGCTTTATTTTTAATTTACCAATCATTGAAGGGTAAGGTCGTATAA

Upstream 100 bases:

>100_bases
TCTTTCTCATTTTATTCACCAAACGAGCCATCGCTTCGGGTTTGGAACTTTTGGGAATTTCAAGTCCTGAAAAAATGTCA
AAAGAAGACGAATCCAATAC

Downstream 100 bases:

>100_bases
TTATGTTTCAAAATATCCTATATTCACTTGGTTTTTTTGTTTTGTTTTATTTGAGTTGGGATGTGGATCTCACATTTCTT
CCTAGTATACGAGAAACTTG

Product: competence-damage inducible protein CinA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MTPYIVILSTGSELTAGRSVDTNSGWIANQLFELGWKVKKIITLPDDPNLIFKELEALQSLAKEIPVLAIMTGGLGPTED
DYTLETVLKLTGKTSYAVEKAKIRLTKIYEARGKDYKDILPTVFRQTNVPEGCKTLDNSVGIAVGFIESLGENSYLVCMP
GVPSEMTEMFKRRLVPELKKMYPRENLIQKTKWLWNIGESLFQNEFIEPNREVYFKETEWGVTANRGYIKCIFQSTNDVM
LDTILKSLEKQYPDLISDDVFQYVHEQLLYEKWTISVVESCTGGLLGKKLTERAGSSAYFMGGFLTYSNEMKSNLLGIPK
ETIETFGAVSDEVAFAMVDGLCLKTGTDFGVSITGIAGPEGGSEEKPVGTVCIGLKEPNGKIKVHRYLFPGNRESIRENA
SNTALFLIYQSLKGKVV

Sequences:

>Translated_417_residues
MTPYIVILSTGSELTAGRSVDTNSGWIANQLFELGWKVKKIITLPDDPNLIFKELEALQSLAKEIPVLAIMTGGLGPTED
DYTLETVLKLTGKTSYAVEKAKIRLTKIYEARGKDYKDILPTVFRQTNVPEGCKTLDNSVGIAVGFIESLGENSYLVCMP
GVPSEMTEMFKRRLVPELKKMYPRENLIQKTKWLWNIGESLFQNEFIEPNREVYFKETEWGVTANRGYIKCIFQSTNDVM
LDTILKSLEKQYPDLISDDVFQYVHEQLLYEKWTISVVESCTGGLLGKKLTERAGSSAYFMGGFLTYSNEMKSNLLGIPK
ETIETFGAVSDEVAFAMVDGLCLKTGTDFGVSITGIAGPEGGSEEKPVGTVCIGLKEPNGKIKVHRYLFPGNRESIRENA
SNTALFLIYQSLKGKVV
>Mature_416_residues
TPYIVILSTGSELTAGRSVDTNSGWIANQLFELGWKVKKIITLPDDPNLIFKELEALQSLAKEIPVLAIMTGGLGPTEDD
YTLETVLKLTGKTSYAVEKAKIRLTKIYEARGKDYKDILPTVFRQTNVPEGCKTLDNSVGIAVGFIESLGENSYLVCMPG
VPSEMTEMFKRRLVPELKKMYPRENLIQKTKWLWNIGESLFQNEFIEPNREVYFKETEWGVTANRGYIKCIFQSTNDVML
DTILKSLEKQYPDLISDDVFQYVHEQLLYEKWTISVVESCTGGLLGKKLTERAGSSAYFMGGFLTYSNEMKSNLLGIPKE
TIETFGAVSDEVAFAMVDGLCLKTGTDFGVSITGIAGPEGGSEEKPVGTVCIGLKEPNGKIKVHRYLFPGNRESIRENAS
NTALFLIYQSLKGKVV

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family

Homologues:

Organism=Escherichia coli, GI1789052, Length=139, Percent_Identity=45.3237410071942, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1787818, Length=135, Percent_Identity=30.3703703703704, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788583, Length=178, Percent_Identity=28.6516853932584, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6323832, Length=181, Percent_Identity=30.3867403314917, Blast_Score=70, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CINAL_LEPBA (B0SB28)

Other databases:

- EMBL:   CP000777
- RefSeq:   YP_001963112.1
- ProteinModelPortal:   B0SB28
- SMR:   B0SB28
- GeneID:   6388408
- GenomeReviews:   CP000777_GR
- KEGG:   lbf:LBF_2034
- HOGENOM:   HBG449871
- OMA:   NPTVAPY
- ProtClustDB:   CLSK574018
- BioCyc:   LBIF355278:LBF_2034-MONOMER
- HAMAP:   MF_00226_B
- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453
- Gene3D:   G3DSA:3.40.980.10
- PIRSF:   PIRSF006728
- SMART:   SM00852
- TIGRFAMs:   TIGR00199

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth

EC number: NA

Molecular weight: Translated: 46456; Mature: 46325

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPYIVILSTGSELTAGRSVDTNSGWIANQLFELGWKVKKIITLPDDPNLIFKELEALQS
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHH
LAKEIPVLAIMTGGLGPTEDDYTLETVLKLTGKTSYAVEKAKIRLTKIYEARGKDYKDIL
HHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHEEHHHHHHHCCCCHHHHH
PTVFRQTNVPEGCKTLDNSVGIAVGFIESLGENSYLVCMPGVPSEMTEMFKRRLVPELKK
HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
MYPRENLIQKTKWLWNIGESLFQNEFIEPNREVYFKETEWGVTANRGYIKCIFQSTNDVM
HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEECCCCEEEEEEECCCHHH
LDTILKSLEKQYPDLISDDVFQYVHEQLLYEKWTISVVESCTGGLLGKKLTERAGSSAYF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEE
MGGFLTYSNEMKSNLLGIPKETIETFGAVSDEVAFAMVDGLCLKTGTDFGVSITGIAGPE
EEEEEEECHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCEECCCCCCEEEEEECCCC
GGSEEKPVGTVCIGLKEPNGKIKVHRYLFPGNRESIRENASNTALFLIYQSLKGKVV
CCCCCCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
TPYIVILSTGSELTAGRSVDTNSGWIANQLFELGWKVKKIITLPDDPNLIFKELEALQS
CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHH
LAKEIPVLAIMTGGLGPTEDDYTLETVLKLTGKTSYAVEKAKIRLTKIYEARGKDYKDIL
HHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHEEHHHHHHHCCCCHHHHH
PTVFRQTNVPEGCKTLDNSVGIAVGFIESLGENSYLVCMPGVPSEMTEMFKRRLVPELKK
HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
MYPRENLIQKTKWLWNIGESLFQNEFIEPNREVYFKETEWGVTANRGYIKCIFQSTNDVM
HCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEECCCCEEEEEEECCCHHH
LDTILKSLEKQYPDLISDDVFQYVHEQLLYEKWTISVVESCTGGLLGKKLTERAGSSAYF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEE
MGGFLTYSNEMKSNLLGIPKETIETFGAVSDEVAFAMVDGLCLKTGTDFGVSITGIAGPE
EEEEEEECHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCEECCCCCCEEEEEECCCC
GGSEEKPVGTVCIGLKEPNGKIKVHRYLFPGNRESIRENASNTALFLIYQSLKGKVV
CCCCCCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA