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The map label for this gene is yigC [C]

Identifier: 183221365

GI number: 183221365

Start: 2060775

End: 2062547

Strand: Reverse

Name: yigC [C]

Synonym: LEPBI_I1983

Alternate gene names: 183221365

Gene position: 2062547-2060775 (Counterclockwise)

Preceding gene: 183221367

Following gene: 183221364

Centisome position: 57.3

GC content: 45.74

Gene sequence:

>1773_bases
ATGGCATCACTACGATCTACGAATGATTTTGTACAACTTTTGCAAAAGGAGGGGGAACTCCATGTCATTTCTGACCTGGT
GGATCCGTATCTGGAACTTGCAGAAATCCAAAGGCGAGTGGTCGCCAAAAAAGGACCAGCACTGCTTTTCACAAATGTCA
AAGGCACAAAATTTCCCGTAGCAACCAACCTCTATGGATCTGAAAAACGAATCCATCTTGCCTTTGGCCCGAAACCAGTC
CAAACGATAGCAAGGCTTGCCAAACTTGCCAAAGAAATGTTTCCTCCTCGTCTTTCCAAACTCTGGAAAGAACGATCTCT
CGGCCTTTTGCCCTTCCAAGTGGGTTTAAAACAAGTCCGCCGTGCTCCCATACTCCAAGGTTCCGTTTCGCGTGTGGAAG
AGCTCCCACAGCTTGTCTCTTGGCCAAAAGATGGTGGTCCCTTTGTCACCCTGCCACTTGTGTATACGGAGCATCCCGAA
TCAGGCAATGGCAATTTGGGAATGTACCGTGTGCAGTTGTTTGGTGAAAAGACTGTCGGAATGCACATCCAAATCCATAG
AGGGGGTGGGTTCCATTACTATGAAGCGGAAAAACAAGGACAAGCGCTCCAAGCCCATGTGTATATCGGCGGTCCACCAG
CACTCACGATAGCCGCAGTGGCACCACTCCCAGAAGAGATCCCAGAACTTGTCTTTGCTTCTTTTTTGATGGGAGAAAAA
CTCCGGATGAAACGGGACAAATTGGTATCTCCGTATCCCATTGTTGCCGATGCAGATTTTGCTCTCATTGGGACCATCCC
TCCTAAATTACGAAGACCAGAAGGTCCCTTTGGTGACCATTATGGGTATTATTCATTATTACACGACTATCCATATTTGG
ATCTCAATCATATCCTGCATAGAAAGGATGCGATTTGGGCTGCCACAGTTGTGGGACGACCTCCCCAGGAAGACCATTAC
ATAGCAGAATTTTTGCAAGATTTGTTATCGCCAATGTTTCCCCTTGTGATGCCACAGGTGCTCGGAGTATGGGCGTATGA
AGAGTCAGGGGTTCATTCTCTGGCAGCTGCCATTGTGAAGGAACGGTATTTCCGGGAAGCTTTTATGGGGGCACTTCGCA
TTTTAGGAGAAGGGCAACTTTCGTTAACGAAGTGTTTGCTTGTGACCAATGAACGAGTGAACTTAAAAAATTTTTCAGAA
ACGTTTCGAGTGATTACAGAACGTTGTGACCCAAAGACTGATTTTTTTATCTTTAGCAATATCAGCCAAGACACACTTGA
TTATACCAGTGGGACCGTAAACAAGGGGAGTAAACTTTTGTGGATGGGGATCACAGACCCGAACAAACCAAGTCCGAATC
CAAACCTTCCCACACAATTCAATGGAAGGTTCAAAGACAAACGTTTCCAAAACCCTAAGGTATTTTTACCGGGGGTTCTC
GTCGTCAAAGGATCGGAATTCCAACCAAATGATCGTTTGGCGGAAGCCTTACTGTCTGAGGATTTGGGTCACTTCTCATA
TGTGTTTTTAGTGGATGACTCGGAAGATGCCGTAAAAACTGATTCGGATTTTATCTGGACCATGTTTACGCGAATGGAAC
CTGCCTCCGATGTGTATGCGAGAACAGAAACCATTCGAAATCATATCTCCTACCAAATCCCCATCGTATTTGATTGCCGA
ATGAAACCTTGGATTCCGGAAGTCCTCATCCCACTTCCTGAAACTGTCAAACTGGTAGAGGAACGATTTGGGAAATGGAT
TGATACCTTATAA

Upstream 100 bases:

>100_bases
TTGATATCGGTAATGATAGGTTGTGAAGTATTTGGTTCTTGGGACATAGAATTTATGCCCCTAAGCGTCTAAGAAAATAA
GGAGCCGTCTATTCCTTTTT

Downstream 100 bases:

>100_bases
GTTGGGAATTGGATTTCTTTTCCTAATTCCCAAAGAAAAGTTGATAGATGGATTCTCTTAGGAAAAAAGAATCATCAGAG
AGATGGCAAAAAAACTCACA

Product: putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein

Products: NA

Alternate protein names: 4-hydroxybenzoate DC; HBDC [H]

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MASLRSTNDFVQLLQKEGELHVISDLVDPYLELAEIQRRVVAKKGPALLFTNVKGTKFPVATNLYGSEKRIHLAFGPKPV
QTIARLAKLAKEMFPPRLSKLWKERSLGLLPFQVGLKQVRRAPILQGSVSRVEELPQLVSWPKDGGPFVTLPLVYTEHPE
SGNGNLGMYRVQLFGEKTVGMHIQIHRGGGFHYYEAEKQGQALQAHVYIGGPPALTIAAVAPLPEEIPELVFASFLMGEK
LRMKRDKLVSPYPIVADADFALIGTIPPKLRRPEGPFGDHYGYYSLLHDYPYLDLNHILHRKDAIWAATVVGRPPQEDHY
IAEFLQDLLSPMFPLVMPQVLGVWAYEESGVHSLAAAIVKERYFREAFMGALRILGEGQLSLTKCLLVTNERVNLKNFSE
TFRVITERCDPKTDFFIFSNISQDTLDYTSGTVNKGSKLLWMGITDPNKPSPNPNLPTQFNGRFKDKRFQNPKVFLPGVL
VVKGSEFQPNDRLAEALLSEDLGHFSYVFLVDDSEDAVKTDSDFIWTMFTRMEPASDVYARTETIRNHISYQIPIVFDCR
MKPWIPEVLIPLPETVKLVEERFGKWIDTL

Sequences:

>Translated_590_residues
MASLRSTNDFVQLLQKEGELHVISDLVDPYLELAEIQRRVVAKKGPALLFTNVKGTKFPVATNLYGSEKRIHLAFGPKPV
QTIARLAKLAKEMFPPRLSKLWKERSLGLLPFQVGLKQVRRAPILQGSVSRVEELPQLVSWPKDGGPFVTLPLVYTEHPE
SGNGNLGMYRVQLFGEKTVGMHIQIHRGGGFHYYEAEKQGQALQAHVYIGGPPALTIAAVAPLPEEIPELVFASFLMGEK
LRMKRDKLVSPYPIVADADFALIGTIPPKLRRPEGPFGDHYGYYSLLHDYPYLDLNHILHRKDAIWAATVVGRPPQEDHY
IAEFLQDLLSPMFPLVMPQVLGVWAYEESGVHSLAAAIVKERYFREAFMGALRILGEGQLSLTKCLLVTNERVNLKNFSE
TFRVITERCDPKTDFFIFSNISQDTLDYTSGTVNKGSKLLWMGITDPNKPSPNPNLPTQFNGRFKDKRFQNPKVFLPGVL
VVKGSEFQPNDRLAEALLSEDLGHFSYVFLVDDSEDAVKTDSDFIWTMFTRMEPASDVYARTETIRNHISYQIPIVFDCR
MKPWIPEVLIPLPETVKLVEERFGKWIDTL
>Mature_589_residues
ASLRSTNDFVQLLQKEGELHVISDLVDPYLELAEIQRRVVAKKGPALLFTNVKGTKFPVATNLYGSEKRIHLAFGPKPVQ
TIARLAKLAKEMFPPRLSKLWKERSLGLLPFQVGLKQVRRAPILQGSVSRVEELPQLVSWPKDGGPFVTLPLVYTEHPES
GNGNLGMYRVQLFGEKTVGMHIQIHRGGGFHYYEAEKQGQALQAHVYIGGPPALTIAAVAPLPEEIPELVFASFLMGEKL
RMKRDKLVSPYPIVADADFALIGTIPPKLRRPEGPFGDHYGYYSLLHDYPYLDLNHILHRKDAIWAATVVGRPPQEDHYI
AEFLQDLLSPMFPLVMPQVLGVWAYEESGVHSLAAAIVKERYFREAFMGALRILGEGQLSLTKCLLVTNERVNLKNFSET
FRVITERCDPKTDFFIFSNISQDTLDYTSGTVNKGSKLLWMGITDPNKPSPNPNLPTQFNGRFKDKRFQNPKVFLPGVLV
VKGSEFQPNDRLAEALLSEDLGHFSYVFLVDDSEDAVKTDSDFIWTMFTRMEPASDVYARTETIRNHISYQIPIVFDCRM
KPWIPEVLIPLPETVKLVEERFGKWIDTL

Specific function: Catalyzes the reversible decarboxylation of 4- hydroxybenzoate [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=454, Percent_Identity=33.4801762114537, Blast_Score=239, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: =4.1.1.61 [H]

Molecular weight: Translated: 66733; Mature: 66602

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLRSTNDFVQLLQKEGELHVISDLVDPYLELAEIQRRVVAKKGPALLFTNVKGTKFPV
CCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCE
ATNLYGSEKRIHLAFGPKPVQTIARLAKLAKEMFPPRLSKLWKERSLGLLPFQVGLKQVR
EECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHH
RAPILQGSVSRVEELPQLVSWPKDGGPFVTLPLVYTEHPESGNGNLGMYRVQLFGEKTVG
HCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEE
MHIQIHRGGGFHYYEAEKQGQALQAHVYIGGPPALTIAAVAPLPEEIPELVFASFLMGEK
EEEEEEECCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
LRMKRDKLVSPYPIVADADFALIGTIPPKLRRPEGPFGDHYGYYSLLHDYPYLDLNHILH
HHHHHHCCCCCCCEEECCCEEEEECCCHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHH
RKDAIWAATVVGRPPQEDHYIAEFLQDLLSPMFPLVMPQVLGVWAYEESGVHSLAAAIVK
HCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHH
ERYFREAFMGALRILGEGQLSLTKCLLVTNERVNLKNFSETFRVITERCDPKTDFFIFSN
HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC
ISQDTLDYTSGTVNKGSKLLWMGITDPNKPSPNPNLPTQFNGRFKDKRFQNPKVFLPGVL
CCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEE
VVKGSEFQPNDRLAEALLSEDLGHFSYVFLVDDSEDAVKTDSDFIWTMFTRMEPASDVYA
EEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEHHHHCCCHHHHHH
RTETIRNHISYQIPIVFDCRMKPWIPEVLIPLPETVKLVEERFGKWIDTL
HHHHHHHHCEEEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASLRSTNDFVQLLQKEGELHVISDLVDPYLELAEIQRRVVAKKGPALLFTNVKGTKFPV
CCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCE
ATNLYGSEKRIHLAFGPKPVQTIARLAKLAKEMFPPRLSKLWKERSLGLLPFQVGLKQVR
EECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHH
RAPILQGSVSRVEELPQLVSWPKDGGPFVTLPLVYTEHPESGNGNLGMYRVQLFGEKTVG
HCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEE
MHIQIHRGGGFHYYEAEKQGQALQAHVYIGGPPALTIAAVAPLPEEIPELVFASFLMGEK
EEEEEEECCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
LRMKRDKLVSPYPIVADADFALIGTIPPKLRRPEGPFGDHYGYYSLLHDYPYLDLNHILH
HHHHHHCCCCCCCEEECCCEEEEECCCHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHH
RKDAIWAATVVGRPPQEDHYIAEFLQDLLSPMFPLVMPQVLGVWAYEESGVHSLAAAIVK
HCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHH
ERYFREAFMGALRILGEGQLSLTKCLLVTNERVNLKNFSETFRVITERCDPKTDFFIFSN
HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEC
ISQDTLDYTSGTVNKGSKLLWMGITDPNKPSPNPNLPTQFNGRFKDKRFQNPKVFLPGVL
CCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEE
VVKGSEFQPNDRLAEALLSEDLGHFSYVFLVDDSEDAVKTDSDFIWTMFTRMEPASDVYA
EEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEHHHHCCCHHHHHH
RTETIRNHISYQIPIVFDCRMKPWIPEVLIPLPETVKLVEERFGKWIDTL
HHHHHHHHCEEEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]