| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is fusA [H]
Identifier: 183221350
GI number: 183221350
Start: 2043288
End: 2045219
Strand: Reverse
Name: fusA [H]
Synonym: LEPBI_I1967
Alternate gene names: 183221350
Gene position: 2045219-2043288 (Counterclockwise)
Preceding gene: 183221351
Following gene: 183221349
Centisome position: 56.82
GC content: 44.57
Gene sequence:
>1932_bases ATGAAATATTACCGAACAGTAGGAATTTTTGCACACATTGATTCGGGAAAAACTACCCTCACCGAACGGATATTATATGA GTCTGGAAAAATTTCGGCGGTGGGTTCCATTGAAGATGGAAATACGGAATCGGATTCTTTACAAGAGGAGATTGAACGTG GGATTTCCATTCGAACCACTTTCCATTCCTTACCTTGGCAAACCGACTTCGGGACATTCCAAATCCAATTAGTAGACACG CCCGGTCATATTGACTTTCGAAACCAAGTCACGGATCTTCTCCCTGCGATGGAAACAGCGGTTGTGGTTTTGGAAGCAGG TACAGTGGTACAATCGCAGGCACGACTCGTGATAGAAGAACTGCGAAAGGCAAGTGTGCCCATTGTCTTTTTTATTAACA AACTGGACCGATTTGGTGATGAATACTTGGACACGCTGGTGTCCCTCGAGGAAATTTTAGGTGTGGCACCTGTTTGCCTA TTTCAAAAAACAGAGTCAGGAGCATTAGAATACTATCTAAACCATTCTCATTCTTTTGCGAAGAAGGTGGATGAGGAACT TCTCTCTTGGAATGATGAACTTTTGATTTCTTCTTGGAGCCAATCTTCGTCTTCGGCAGATTTTGCGAGGATCGGTTTGA AGGATGGTCCCAAATCCGGAAAACTTTTTCCTGTGTATGGAGGTTCTGCTAAAACAGGGGAAGGGGTTCGGGAACTTTTA GACCTCCTCCTTTGGACAAATCCCAAAGTTCCAACTGACATAATCCCATTGGCCTATCCTCTACTTGTTTTATCCCGAAG GATGGCGGAGGGAATTGGTCCTTATGCCGTTGTGTATCCACTAAAGGATTTGAGCGAATTAGACCTTCTTTCCATGACGG AAACCTTTCTCCAATCCGTTCCTTTGCCTCCGAACGCTTCGAACGCTGGTCTTTTCCAATTCATCGACCCGGAGACGGAA GAAACAACCCAAGAGATCCATAAGGGAAAACTTGTCCTCTTGAAACACAATGAACGTTTTCTTCTGTATCCAGGTGAGCC CGTTGCCTTACGGAATGTTCAGGGAATAGGAAACGAGAACCAAAAAGACCAACGTTCCCCAAGTCCCTTTTCTCTTGTGA TTGAACCGGAAGAATCCTCGGACAAAGAGTTTTGGTTATGTCGCCTAGAGGAACTCGTGTGGGAAGACCCGGGGTATCAG ACGGCAATCAAGGAAGATACAGGACAAATTGTCCTCTTTGGGCGAGGGGAACTCCATTTGGAAATTGGGATCAAACGAAT TTCCGGGAAAACAGAAAAAAAACTCACTTTTAGTTCGATAAACATTGCCAAATTAGAGCTTTTTAAAAAAATGTCTCATA AGGTTGCCCTAGAGCATCGTGCCTTTGAAGACCAAAAGTCAAGCGGCACGCTCATCGCAGTCCTGGAAGATACTGCCGAT TTTTCGAAGCAAATTGCCTTCGAGGTAAGTCTTCCGGAAGAAGTAAAAAATTCGATAGAAATGTCCTTTAAGGAAGCCTG CTTACACGGGTTTTACGGTGAGGAAGTTTGTGGTCTTAGGCTTCGTATTCTCTCTTATGAGATGCCGAAGGGAGACTTAC AAACCACTCTCACTCTTCTCAAAGTAGCAATACTTGCGGGAGTGAAGGAATGTTTTCCGTCAAACACATATTTGGTTGGT CCCCTCACTGAAATTGAAGTGATGGTAGACTCAGACCACTTAGGTGTAGTTCTTTCTGATCTAAGTCGCAGGGACGCAAA GGTGGTTTCCATCATTGAGGCTGTGGCAGGGAAGAGTCACTTAAAAGCCAATGCACCGGCCCAAAACCTGCTTGGCTTTT CAGGGGCTCTTAGAAACATGACCAAAGGGATTGGCATTTCTTGGGAAAGGACTGCTTTTACCTCTGAATTTTATGCAGTT CTAAAGGAGTAA
Upstream 100 bases:
>100_bases AACAAGGCATTCTCTCACTACCGCTGGTAGTAGTATCCAATCGATTCCAAACATTGATGAGCCAGGTGGAAACCTGGCTT TTTTGTTTTAACACACCAAT
Downstream 100 bases:
>100_bases AGAACCGAATATCGGGTCTTGCACCACGATTGAGGAGTAGATTCTAACAATGGCTAAAGAAAAATTTGACCGTTCAAAAC CACACTTAAACATCGGAACA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 643; Mature: 643
Protein sequence:
>643_residues MKYYRTVGIFAHIDSGKTTLTERILYESGKISAVGSIEDGNTESDSLQEEIERGISIRTTFHSLPWQTDFGTFQIQLVDT PGHIDFRNQVTDLLPAMETAVVVLEAGTVVQSQARLVIEELRKASVPIVFFINKLDRFGDEYLDTLVSLEEILGVAPVCL FQKTESGALEYYLNHSHSFAKKVDEELLSWNDELLISSWSQSSSSADFARIGLKDGPKSGKLFPVYGGSAKTGEGVRELL DLLLWTNPKVPTDIIPLAYPLLVLSRRMAEGIGPYAVVYPLKDLSELDLLSMTETFLQSVPLPPNASNAGLFQFIDPETE ETTQEIHKGKLVLLKHNERFLLYPGEPVALRNVQGIGNENQKDQRSPSPFSLVIEPEESSDKEFWLCRLEELVWEDPGYQ TAIKEDTGQIVLFGRGELHLEIGIKRISGKTEKKLTFSSINIAKLELFKKMSHKVALEHRAFEDQKSSGTLIAVLEDTAD FSKQIAFEVSLPEEVKNSIEMSFKEACLHGFYGEEVCGLRLRILSYEMPKGDLQTTLTLLKVAILAGVKECFPSNTYLVG PLTEIEVMVDSDHLGVVLSDLSRRDAKVVSIIEAVAGKSHLKANAPAQNLLGFSGALRNMTKGIGISWERTAFTSEFYAV LKE
Sequences:
>Translated_643_residues MKYYRTVGIFAHIDSGKTTLTERILYESGKISAVGSIEDGNTESDSLQEEIERGISIRTTFHSLPWQTDFGTFQIQLVDT PGHIDFRNQVTDLLPAMETAVVVLEAGTVVQSQARLVIEELRKASVPIVFFINKLDRFGDEYLDTLVSLEEILGVAPVCL FQKTESGALEYYLNHSHSFAKKVDEELLSWNDELLISSWSQSSSSADFARIGLKDGPKSGKLFPVYGGSAKTGEGVRELL DLLLWTNPKVPTDIIPLAYPLLVLSRRMAEGIGPYAVVYPLKDLSELDLLSMTETFLQSVPLPPNASNAGLFQFIDPETE ETTQEIHKGKLVLLKHNERFLLYPGEPVALRNVQGIGNENQKDQRSPSPFSLVIEPEESSDKEFWLCRLEELVWEDPGYQ TAIKEDTGQIVLFGRGELHLEIGIKRISGKTEKKLTFSSINIAKLELFKKMSHKVALEHRAFEDQKSSGTLIAVLEDTAD FSKQIAFEVSLPEEVKNSIEMSFKEACLHGFYGEEVCGLRLRILSYEMPKGDLQTTLTLLKVAILAGVKECFPSNTYLVG PLTEIEVMVDSDHLGVVLSDLSRRDAKVVSIIEAVAGKSHLKANAPAQNLLGFSGALRNMTKGIGISWERTAFTSEFYAV LKE >Mature_643_residues MKYYRTVGIFAHIDSGKTTLTERILYESGKISAVGSIEDGNTESDSLQEEIERGISIRTTFHSLPWQTDFGTFQIQLVDT PGHIDFRNQVTDLLPAMETAVVVLEAGTVVQSQARLVIEELRKASVPIVFFINKLDRFGDEYLDTLVSLEEILGVAPVCL FQKTESGALEYYLNHSHSFAKKVDEELLSWNDELLISSWSQSSSSADFARIGLKDGPKSGKLFPVYGGSAKTGEGVRELL DLLLWTNPKVPTDIIPLAYPLLVLSRRMAEGIGPYAVVYPLKDLSELDLLSMTETFLQSVPLPPNASNAGLFQFIDPETE ETTQEIHKGKLVLLKHNERFLLYPGEPVALRNVQGIGNENQKDQRSPSPFSLVIEPEESSDKEFWLCRLEELVWEDPGYQ TAIKEDTGQIVLFGRGELHLEIGIKRISGKTEKKLTFSSINIAKLELFKKMSHKVALEHRAFEDQKSSGTLIAVLEDTAD FSKQIAFEVSLPEEVKNSIEMSFKEACLHGFYGEEVCGLRLRILSYEMPKGDLQTTLTLLKVAILAGVKECFPSNTYLVG PLTEIEVMVDSDHLGVVLSDLSRRDAKVVSIIEAVAGKSHLKANAPAQNLLGFSGALRNMTKGIGISWERTAFTSEFYAV LKE
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=138, Percent_Identity=42.7536231884058, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI25306283, Length=209, Percent_Identity=33.9712918660287, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI19923640, Length=209, Percent_Identity=33.9712918660287, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI25306287, Length=280, Percent_Identity=30.7142857142857, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI4503483, Length=146, Percent_Identity=32.1917808219178, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI157426893, Length=132, Percent_Identity=32.5757575757576, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI94966754, Length=136, Percent_Identity=30.8823529411765, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1789738, Length=192, Percent_Identity=35.4166666666667, Blast_Score=119, Evalue=7e-28, Organism=Escherichia coli, GI1790835, Length=163, Percent_Identity=33.1288343558282, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1788922, Length=159, Percent_Identity=33.9622641509434, Blast_Score=86, Evalue=9e-18, Organism=Escherichia coli, GI48994988, Length=153, Percent_Identity=30.0653594771242, Blast_Score=79, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17556745, Length=156, Percent_Identity=39.7435897435897, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17533571, Length=152, Percent_Identity=40.7894736842105, Blast_Score=104, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17506493, Length=157, Percent_Identity=29.2993630573248, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17557151, Length=165, Percent_Identity=29.6969696969697, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6322359, Length=145, Percent_Identity=42.7586206896552, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6323098, Length=154, Percent_Identity=38.961038961039, Blast_Score=113, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6324707, Length=145, Percent_Identity=35.1724137931034, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6320593, Length=145, Percent_Identity=35.1724137931034, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323320, Length=170, Percent_Identity=28.8235294117647, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24582462, Length=684, Percent_Identity=24.2690058479532, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI221458488, Length=271, Percent_Identity=32.4723247232472, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI78706572, Length=132, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24585711, Length=149, Percent_Identity=30.8724832214765, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24585713, Length=149, Percent_Identity=30.8724832214765, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24585709, Length=149, Percent_Identity=30.8724832214765, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI28574573, Length=141, Percent_Identity=31.9148936170213, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 71519; Mature: 71519
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYYRTVGIFAHIDSGKTTLTERILYESGKISAVGSIEDGNTESDSLQEEIERGISIRTT CCCEEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEE FHSLPWQTDFGTFQIQLVDTPGHIDFRNQVTDLLPAMETAVVVLEAGTVVQSQARLVIEE ECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHH LRKASVPIVFFINKLDRFGDEYLDTLVSLEEILGVAPVCLFQKTESGALEYYLNHSHSFA HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCHHHH KKVDEELLSWNDELLISSWSQSSSSADFARIGLKDGPKSGKLFPVYGGSAKTGEGVRELL HHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHH DLLLWTNPKVPTDIIPLAYPLLVLSRRMAEGIGPYAVVYPLKDLSELDLLSMTETFLQSV HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHC PLPPNASNAGLFQFIDPETEETTQEIHKGKLVLLKHNERFLLYPGEPVALRNVQGIGNEN CCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCEEEEECCCCEEEECCCCCCCCC QKDQRSPSPFSLVIEPEESSDKEFWLCRLEELVWEDPGYQTAIKEDTGQIVLFGRGELHL CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCEEEE EIGIKRISGKTEKKLTFSSINIAKLELFKKMSHKVALEHRAFEDQKSSGTLIAVLEDTAD EEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC FSKQIAFEVSLPEEVKNSIEMSFKEACLHGFYGEEVCGLRLRILSYEMPKGDLQTTLTLL CCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHCEEEEEEEECCCCCHHHHHHHHH KVAILAGVKECFPSNTYLVGPLTEIEVMVDSDHLGVVLSDLSRRDAKVVSIIEAVAGKSH HHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC LKANAPAQNLLGFSGALRNMTKGIGISWERTAFTSEFYAVLKE CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKYYRTVGIFAHIDSGKTTLTERILYESGKISAVGSIEDGNTESDSLQEEIERGISIRTT CCCEEEEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEE FHSLPWQTDFGTFQIQLVDTPGHIDFRNQVTDLLPAMETAVVVLEAGTVVQSQARLVIEE ECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHH LRKASVPIVFFINKLDRFGDEYLDTLVSLEEILGVAPVCLFQKTESGALEYYLNHSHSFA HHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCHHHH KKVDEELLSWNDELLISSWSQSSSSADFARIGLKDGPKSGKLFPVYGGSAKTGEGVRELL HHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHH DLLLWTNPKVPTDIIPLAYPLLVLSRRMAEGIGPYAVVYPLKDLSELDLLSMTETFLQSV HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHC PLPPNASNAGLFQFIDPETEETTQEIHKGKLVLLKHNERFLLYPGEPVALRNVQGIGNEN CCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEEECCEEEEECCCCEEEECCCCCCCCC QKDQRSPSPFSLVIEPEESSDKEFWLCRLEELVWEDPGYQTAIKEDTGQIVLFGRGELHL CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCEEEE EIGIKRISGKTEKKLTFSSINIAKLELFKKMSHKVALEHRAFEDQKSSGTLIAVLEDTAD EEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCC FSKQIAFEVSLPEEVKNSIEMSFKEACLHGFYGEEVCGLRLRILSYEMPKGDLQTTLTLL CCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHCEEEEEEEECCCCCHHHHHHHHH KVAILAGVKECFPSNTYLVGPLTEIEVMVDSDHLGVVLSDLSRRDAKVVSIIEAVAGKSH HHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC LKANAPAQNLLGFSGALRNMTKGIGISWERTAFTSEFYAVLKE CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]