| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221185
Identifier: 183221185
GI number: 183221185
Start: 1876373
End: 1877188
Strand: Direct
Name: 183221185
Synonym: LEPBI_I1799
Alternate gene names: NA
Gene position: 1876373-1877188 (Clockwise)
Preceding gene: 183221184
Following gene: 183221186
Centisome position: 52.13
GC content: 41.18
Gene sequence:
>816_bases GTGGCGGTACTTCCCCAAATCCAAGAAGACAAATGGAAATCCTTACGCTATTTCCTTGGCGGGATCTTTTTTGTACTCGT CTTAATTGAAAAATCTATGGGGTTTGATCTAAAAACCACGGGAAATTTTTTTCCAAAACAAGGTTTCAAAAACATTGGGA AATTGACCGAAAAACCAAAATTCGCCGAACCTACAGACCCTTTCCAAAGTGAAAATTTTGAAGATGAATTGAATTGGGAA GAAGAAGTGTTCAATCATACTTATCCTTCAACTTCGAGCAAATCCAAACCAAACAAAATCGTTGATGATACCATTCCAGA GATCACCTTACCAGAAGACAGGTTCCCAGGAGCCGGAAAACGAATCCAAGCAGAACCAGGTTACCTTCCTGTTTACTTTT TAAAATTTTACGGTACGGGCAAAAATAGCCAGTCGCAACTTGTCAAACTCACACGGGAATTCCCAGGTGGGGACCCCATC GTTTTCCTATTCCAAGAATTGACAAAAGGCCCAAACGGTGAGGAAAAAACGAAGGGAGTTTTATCTGCCCTGACTAAAAA GATCCGAATTGATCCCAATTATCGTTTGGAAAATGGAATCCTCCACCTCTCCGTTTCCGAGGACTTCAATTATGGTGGGA GTATGGAAATCCTAAAAGACCGCTTGGACCAAATCACCTTCACTTATGTGGGCCATTTTGGAATCCAAGGAGTTGTACTA TATACAAATGGGGAAAGAATCCGAAGCCTTGGCAGTGATGGTTTGTCTTTACCTGATGTCCTTGCCAAATCCCAACGAAA AGTGATTTTATTCTAA
Upstream 100 bases:
>100_bases CCTGGAGAAATCCCAGACTTTGATTGGAAATTTGAAGATTTAACAACTCTCAAAGAAATTTTTTAAATTCTAAATTCGAA CCTACTCCGACATTGATAGT
Downstream 100 bases:
>100_bases TCCACTAAATGGTTTACAGAGAATCCACAAATTGTATCCTAAAGTCTGGTTTTCACCATGCGTAGGTATACCTTCAAACG ATACGAATTTGTTTTGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MAVLPQIQEDKWKSLRYFLGGIFFVLVLIEKSMGFDLKTTGNFFPKQGFKNIGKLTEKPKFAEPTDPFQSENFEDELNWE EEVFNHTYPSTSSKSKPNKIVDDTIPEITLPEDRFPGAGKRIQAEPGYLPVYFLKFYGTGKNSQSQLVKLTREFPGGDPI VFLFQELTKGPNGEEKTKGVLSALTKKIRIDPNYRLENGILHLSVSEDFNYGGSMEILKDRLDQITFTYVGHFGIQGVVL YTNGERIRSLGSDGLSLPDVLAKSQRKVILF
Sequences:
>Translated_271_residues MAVLPQIQEDKWKSLRYFLGGIFFVLVLIEKSMGFDLKTTGNFFPKQGFKNIGKLTEKPKFAEPTDPFQSENFEDELNWE EEVFNHTYPSTSSKSKPNKIVDDTIPEITLPEDRFPGAGKRIQAEPGYLPVYFLKFYGTGKNSQSQLVKLTREFPGGDPI VFLFQELTKGPNGEEKTKGVLSALTKKIRIDPNYRLENGILHLSVSEDFNYGGSMEILKDRLDQITFTYVGHFGIQGVVL YTNGERIRSLGSDGLSLPDVLAKSQRKVILF >Mature_270_residues AVLPQIQEDKWKSLRYFLGGIFFVLVLIEKSMGFDLKTTGNFFPKQGFKNIGKLTEKPKFAEPTDPFQSENFEDELNWEE EVFNHTYPSTSSKSKPNKIVDDTIPEITLPEDRFPGAGKRIQAEPGYLPVYFLKFYGTGKNSQSQLVKLTREFPGGDPIV FLFQELTKGPNGEEKTKGVLSALTKKIRIDPNYRLENGILHLSVSEDFNYGGSMEILKDRLDQITFTYVGHFGIQGVVLY TNGERIRSLGSDGLSLPDVLAKSQRKVILF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30675; Mature: 30544
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLPQIQEDKWKSLRYFLGGIFFVLVLIEKSMGFDLKTTGNFFPKQGFKNIGKLTEKPK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC FAEPTDPFQSENFEDELNWEEEVFNHTYPSTSSKSKPNKIVDDTIPEITLPEDRFPGAGK CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC RIQAEPGYLPVYFLKFYGTGKNSQSQLVKLTREFPGGDPIVFLFQELTKGPNGEEKTKGV EEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCHHHHHHH LSALTKKIRIDPNYRLENGILHLSVSEDFNYGGSMEILKDRLDQITFTYVGHFGIQGVVL HHHHHHHEECCCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHHEEHEEEECCCCCEEEE YTNGERIRSLGSDGLSLPDVLAKSQRKVILF EECCHHHHHCCCCCCCCHHHHHHCCCCEEEC >Mature Secondary Structure AVLPQIQEDKWKSLRYFLGGIFFVLVLIEKSMGFDLKTTGNFFPKQGFKNIGKLTEKPK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC FAEPTDPFQSENFEDELNWEEEVFNHTYPSTSSKSKPNKIVDDTIPEITLPEDRFPGAGK CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC RIQAEPGYLPVYFLKFYGTGKNSQSQLVKLTREFPGGDPIVFLFQELTKGPNGEEKTKGV EEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCHHHHHHH LSALTKKIRIDPNYRLENGILHLSVSEDFNYGGSMEILKDRLDQITFTYVGHFGIQGVVL HHHHHHHEECCCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHHEEHEEEECCCCCEEEE YTNGERIRSLGSDGLSLPDVLAKSQRKVILF EECCHHHHHCCCCCCCCHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA