| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220874
Identifier: 183220874
GI number: 183220874
Start: 1547341
End: 1548915
Strand: Reverse
Name: 183220874
Synonym: LEPBI_I1487
Alternate gene names: NA
Gene position: 1548915-1547341 (Counterclockwise)
Preceding gene: 183220876
Following gene: 183220870
Centisome position: 43.03
GC content: 40.32
Gene sequence:
>1575_bases ATGAAGCACCTCTTTTTTGGTTTTTTTTCTTTGGCCCTCTACTTAGTAATCTTGAACCCATTGATCGGTGAATCAATCGA AAGTCAAGAATCCACTCCCAAAGATGGCACTACACTTTATCCATCCAAAACAATCGAAAAGGACTCAAACCAACAAACAA CCCCAGGTGAAGTAAAGTTTCGCCTAACAGGAATGTTAAAAACAGACTTCGCTTATGCAAACGAATCGGTATTGTCCTTT GGATTTGATAATTTAGTCGGACCAACTGTTGCCAAAAGACAAGTCCAAGCCAGAGATTCAGAACCAAGGTCTGGAATTTA TCCCACCAGTTCCTTACTCGGAGCAGAAATCCTTTATGGAACGAAAGCAAAGGCAATCTTTGAAGCTGACTTTGTGGATG TCACAAAAAGTAGTGTGGGAGCAGAAACAAAACCGAGAGTCAGGCAAATGTATTTCCAATACAACCCATCTACTAAAATC GAAATTTTTTTAGGTAGGACATGGGATCTCTTTGCGGGTGTGTATCCTCAATCCTATAATGCAAGTGCCTTTATGTCTGG ATCAGGAAATATTGGATGGCAAAGGGAACAAATTGGTCTGTGGTATCAATTGGGCGATGTAAAACTTGGGTCGGCAATTG GAACGACAGGGTTTCATAATGATCCCAATGTCAAAACCAATATCGAACGAAATTCCATGCCAACGATTGCAGTCAGAATG GATTGGAAACCCTCCTCACAATTTTTTTTCACAACATCAGCCATTGGTACAAAACTCAAAGTCAGTGACCCATCGACTGA TTCCGCAAGAGATGGATTGGCATTACGTGCCAATCAATTCAATGATCCTAATCAATCTGTGTTAAATGCTTTCACACAAA AAGAAACAAACCAAAGGAGCACTCTGGATTCAGGCGGAGTTTCGATTGGATTTGTTTGGAAACAAGGAAACTTTGAATCA CGTGGCGAAATTTCATACGGAACAAACCTAACTTCGATTACTTCTTCTGGAATCGCCCCCTTCCAAACAACTACCTATGG TGAAGAATTTACAAATAGTAGGCTAGGATTTCTGAGTGGAGAGTTTTCTAATGATGCGAAGTCCAATACAAAAAAAAAGT TTGAATCTCCGAGGGAACTAACAGGTTTTTTAAGTTTGAATTATGATGTCTCCAAACAATTTGGTTTCGGAATCCATACA GGAGTTTCCAAAATTACAAACCCTGAAGTACTCGTTGGTGCCGATTTTAATGCACTTTCCACAAGCAGACCAGATAGTTT TCAATGGACATCCAATCCTAGAATTATGGGAGCCATGCGTGAAAATCTCAATTATGGATTCCGTATGAATTATGATCCCG AAGAGAAAATTCGATTTTTTTTACAAACAGATGTGTTTCGCACCTATTACAAAGATGTGGAACGATACCAAGGAGTTTCG GCGCATATCGGTAGTTATGATCCAATGCAACAAACGGGCGAGTGGAGAGATCCAGGCAACAAATCTGAACGCTCCAGTGC TGTCGCGGAGTCATTGATGATACGATTAGGTGGATTATTTCGATTTGATGCTTAG
Upstream 100 bases:
>100_bases TTCTTTTCGATATTTAGAATGTTTTCTTGCTAAATGTAAGATGAATGTATAAAGTGTTCTCACATTTTTGGTTTCAACCA TGATAAGGATCAAATGAAAT
Downstream 100 bases:
>100_bases ATATTCAAATTCTAACCACTTAAAGAGTAATTGTTTTAAATTATCTTTTTGCACTGGTTTACTCAAATAATCATTCATAC CCACTTCAAAACATTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MKHLFFGFFSLALYLVILNPLIGESIESQESTPKDGTTLYPSKTIEKDSNQQTTPGEVKFRLTGMLKTDFAYANESVLSF GFDNLVGPTVAKRQVQARDSEPRSGIYPTSSLLGAEILYGTKAKAIFEADFVDVTKSSVGAETKPRVRQMYFQYNPSTKI EIFLGRTWDLFAGVYPQSYNASAFMSGSGNIGWQREQIGLWYQLGDVKLGSAIGTTGFHNDPNVKTNIERNSMPTIAVRM DWKPSSQFFFTTSAIGTKLKVSDPSTDSARDGLALRANQFNDPNQSVLNAFTQKETNQRSTLDSGGVSIGFVWKQGNFES RGEISYGTNLTSITSSGIAPFQTTTYGEEFTNSRLGFLSGEFSNDAKSNTKKKFESPRELTGFLSLNYDVSKQFGFGIHT GVSKITNPEVLVGADFNALSTSRPDSFQWTSNPRIMGAMRENLNYGFRMNYDPEEKIRFFLQTDVFRTYYKDVERYQGVS AHIGSYDPMQQTGEWRDPGNKSERSSAVAESLMIRLGGLFRFDA
Sequences:
>Translated_524_residues MKHLFFGFFSLALYLVILNPLIGESIESQESTPKDGTTLYPSKTIEKDSNQQTTPGEVKFRLTGMLKTDFAYANESVLSF GFDNLVGPTVAKRQVQARDSEPRSGIYPTSSLLGAEILYGTKAKAIFEADFVDVTKSSVGAETKPRVRQMYFQYNPSTKI EIFLGRTWDLFAGVYPQSYNASAFMSGSGNIGWQREQIGLWYQLGDVKLGSAIGTTGFHNDPNVKTNIERNSMPTIAVRM DWKPSSQFFFTTSAIGTKLKVSDPSTDSARDGLALRANQFNDPNQSVLNAFTQKETNQRSTLDSGGVSIGFVWKQGNFES RGEISYGTNLTSITSSGIAPFQTTTYGEEFTNSRLGFLSGEFSNDAKSNTKKKFESPRELTGFLSLNYDVSKQFGFGIHT GVSKITNPEVLVGADFNALSTSRPDSFQWTSNPRIMGAMRENLNYGFRMNYDPEEKIRFFLQTDVFRTYYKDVERYQGVS AHIGSYDPMQQTGEWRDPGNKSERSSAVAESLMIRLGGLFRFDA >Mature_524_residues MKHLFFGFFSLALYLVILNPLIGESIESQESTPKDGTTLYPSKTIEKDSNQQTTPGEVKFRLTGMLKTDFAYANESVLSF GFDNLVGPTVAKRQVQARDSEPRSGIYPTSSLLGAEILYGTKAKAIFEADFVDVTKSSVGAETKPRVRQMYFQYNPSTKI EIFLGRTWDLFAGVYPQSYNASAFMSGSGNIGWQREQIGLWYQLGDVKLGSAIGTTGFHNDPNVKTNIERNSMPTIAVRM DWKPSSQFFFTTSAIGTKLKVSDPSTDSARDGLALRANQFNDPNQSVLNAFTQKETNQRSTLDSGGVSIGFVWKQGNFES RGEISYGTNLTSITSSGIAPFQTTTYGEEFTNSRLGFLSGEFSNDAKSNTKKKFESPRELTGFLSLNYDVSKQFGFGIHT GVSKITNPEVLVGADFNALSTSRPDSFQWTSNPRIMGAMRENLNYGFRMNYDPEEKIRFFLQTDVFRTYYKDVERYQGVS AHIGSYDPMQQTGEWRDPGNKSERSSAVAESLMIRLGGLFRFDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58395; Mature: 58395
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLFFGFFSLALYLVILNPLIGESIESQESTPKDGTTLYPSKTIEKDSNQQTTPGEVKF CCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEE RLTGMLKTDFAYANESVLSFGFDNLVGPTVAKRQVQARDSEPRSGIYPTSSLLGAEILYG EEEEEEEECHHHCCCHHHHHCCHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEC TKAKAIFEADFVDVTKSSVGAETKPRVRQMYFQYNPSTKIEIFLGRTWDLFAGVYPQSYN CCCCEEEECHHHHHHHHHCCCCCCCHHHEEEEEECCCCEEEEEECCCHHHHHCCCCCCCC ASAFMSGSGNIGWQREQIGLWYQLGDVKLGSAIGTTGFHNDPNVKTNIERNSMPTIAVRM CCEEECCCCCCCEEHHHEEEEEEECCEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEE DWKPSSQFFFTTSAIGTKLKVSDPSTDSARDGLALRANQFNDPNQSVLNAFTQKETNQRS CCCCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHH TLDSGGVSIGFVWKQGNFESRGEISYGTNLTSITSSGIAPFQTTTYGEEFTNSRLGFLSG CCCCCCEEEEEEEECCCCCCCCCEEECCCHHHHHCCCCCCCEECCCCHHHCCCCCEEEEC EFSNDAKSNTKKKFESPRELTGFLSLNYDVSKQFGFGIHTGVSKITNPEVLVGADFNALS CCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHCCCCHHHCHHHCCCCCEEEECCCCCCC TSRPDSFQWTSNPRIMGAMRENLNYGFRMNYDPEEKIRFFLQTDVFRTYYKDVERYQGVS CCCCCCEEECCCCEEEHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH AHIGSYDPMQQTGEWRDPGNKSERSSAVAESLMIRLGGLFRFDA HCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure MKHLFFGFFSLALYLVILNPLIGESIESQESTPKDGTTLYPSKTIEKDSNQQTTPGEVKF CCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEE RLTGMLKTDFAYANESVLSFGFDNLVGPTVAKRQVQARDSEPRSGIYPTSSLLGAEILYG EEEEEEEECHHHCCCHHHHHCCHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEC TKAKAIFEADFVDVTKSSVGAETKPRVRQMYFQYNPSTKIEIFLGRTWDLFAGVYPQSYN CCCCEEEECHHHHHHHHHCCCCCCCHHHEEEEEECCCCEEEEEECCCHHHHHCCCCCCCC ASAFMSGSGNIGWQREQIGLWYQLGDVKLGSAIGTTGFHNDPNVKTNIERNSMPTIAVRM CCEEECCCCCCCEEHHHEEEEEEECCEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEE DWKPSSQFFFTTSAIGTKLKVSDPSTDSARDGLALRANQFNDPNQSVLNAFTQKETNQRS CCCCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHH TLDSGGVSIGFVWKQGNFESRGEISYGTNLTSITSSGIAPFQTTTYGEEFTNSRLGFLSG CCCCCCEEEEEEEECCCCCCCCCEEECCCHHHHHCCCCCCCEECCCCHHHCCCCCEEEEC EFSNDAKSNTKKKFESPRELTGFLSLNYDVSKQFGFGIHTGVSKITNPEVLVGADFNALS CCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHCCCCHHHCHHHCCCCCEEEECCCCCCC TSRPDSFQWTSNPRIMGAMRENLNYGFRMNYDPEEKIRFFLQTDVFRTYYKDVERYQGVS CCCCCCEEECCCCEEEHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH AHIGSYDPMQQTGEWRDPGNKSERSSAVAESLMIRLGGLFRFDA HCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA