Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is yahD [C]

Identifier: 183220876

GI number: 183220876

Start: 1551070

End: 1551705

Strand: Reverse

Name: yahD [C]

Synonym: LEPBI_I1489

Alternate gene names: 183220876

Gene position: 1551705-1551070 (Counterclockwise)

Preceding gene: 183220877

Following gene: 183220874

Centisome position: 43.11

GC content: 35.53

Gene sequence:

>636_bases
ATGATTCGTATTCTCCAACCTATCATCATTGTTGTTTTGGGAGTTTTATCTTTCTATTGCACTGAATCCAAATCCTTACT
CAAAACAAGTGAAAAAGGACAAATCCTTGCTCTCAAACAATTGTTACTGGAAAAAACTGATCCCAATGTTCAAAACCAAA
ACGGAGAAACTCCGCTTATCCTTGCTACAAAATTTGGATATGCAGAAATTGTAGAAATTTTGATCCAAAACCAGGCCAAT
GTGAATTTAGTAGATCAAACGGGAAAAACTGCTTTCCATTGGTCTGTTAAAAAACGTTTTTTGAACATCGCTGAAATATT
GTTAGAAGCAAAAACAAAGGTAGATGCAGTCGACTCAAACAAAAAAACAGCATTGGTATACGTGACCAAAATAGGACACG
CGGATATGGTGAAACTTCTCATCACAAAACAACCAAATCCAAATTTGCAAGATCGTTTTGAGAATACAGCTTTTATGTTG
TCCGTTCGGAACCAACAAATGGACGTTGCAGAATTTCTCATCCAAGCCAATGCAAATGTCCTTCATCGAAATTTTTTAGG
ATACTCTGCCTTAGATGATGCCAACAAACCATCCATGGAAAAAATTAAAAAACTGATCGAGGAAAAAATCAAATAA

Upstream 100 bases:

>100_bases
TTCGCTGAAGAAAACCCCATGGATATCGACCCAGTCTTAACTCAAGCCATCGAATATTACAAAACCTATTTGAGTATCAT
GAAGGAAACCAAGTGAACGC

Downstream 100 bases:

>100_bases
AATCAATTTAAACTGATAGGCAATTTCTTTCATGTCAATTGCAGTTTGGTTTAATTCAGAAGAACTATCGGCCGTTTGCA
TTGAGACCTCACTCATCTGA

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MIRILQPIIIVVLGVLSFYCTESKSLLKTSEKGQILALKQLLLEKTDPNVQNQNGETPLILATKFGYAEIVEILIQNQAN
VNLVDQTGKTAFHWSVKKRFLNIAEILLEAKTKVDAVDSNKKTALVYVTKIGHADMVKLLITKQPNPNLQDRFENTAFML
SVRNQQMDVAEFLIQANANVLHRNFLGYSALDDANKPSMEKIKKLIEEKIK

Sequences:

>Translated_211_residues
MIRILQPIIIVVLGVLSFYCTESKSLLKTSEKGQILALKQLLLEKTDPNVQNQNGETPLILATKFGYAEIVEILIQNQAN
VNLVDQTGKTAFHWSVKKRFLNIAEILLEAKTKVDAVDSNKKTALVYVTKIGHADMVKLLITKQPNPNLQDRFENTAFML
SVRNQQMDVAEFLIQANANVLHRNFLGYSALDDANKPSMEKIKKLIEEKIK
>Mature_211_residues
MIRILQPIIIVVLGVLSFYCTESKSLLKTSEKGQILALKQLLLEKTDPNVQNQNGETPLILATKFGYAEIVEILIQNQAN
VNLVDQTGKTAFHWSVKKRFLNIAEILLEAKTKVDAVDSNKKTALVYVTKIGHADMVKLLITKQPNPNLQDRFENTAFML
SVRNQQMDVAEFLIQANANVLHRNFLGYSALDDANKPSMEKIKKLIEEKIK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI89363047, Length=187, Percent_Identity=27.807486631016, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI55741641, Length=156, Percent_Identity=32.0512820512821, Blast_Score=85, Evalue=4e-17,
Organism=Homo sapiens, GI148596917, Length=189, Percent_Identity=28.042328042328, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI46519151, Length=189, Percent_Identity=26.4550264550265, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI224809476, Length=167, Percent_Identity=30.5389221556886, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI224809478, Length=167, Percent_Identity=30.5389221556886, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI224809472, Length=167, Percent_Identity=30.5389221556886, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI224809470, Length=167, Percent_Identity=30.5389221556886, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI224809468, Length=167, Percent_Identity=30.5389221556886, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI46519154, Length=189, Percent_Identity=26.4550264550265, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI224809474, Length=167, Percent_Identity=30.5389221556886, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI7705748, Length=186, Percent_Identity=26.8817204301075, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI163914396, Length=186, Percent_Identity=26.8817204301075, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI34304381, Length=164, Percent_Identity=28.0487804878049, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI62988328, Length=175, Percent_Identity=29.7142857142857, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI70780359, Length=179, Percent_Identity=26.8156424581006, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI70780353, Length=179, Percent_Identity=26.8156424581006, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI32967601, Length=177, Percent_Identity=28.2485875706215, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI70780357, Length=179, Percent_Identity=26.8156424581006, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI70780355, Length=179, Percent_Identity=26.8156424581006, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI38683816, Length=221, Percent_Identity=21.7194570135747, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI34304379, Length=164, Percent_Identity=28.0487804878049, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI215598574, Length=179, Percent_Identity=26.8156424581006, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI268607595, Length=175, Percent_Identity=29.7142857142857, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI37620163, Length=189, Percent_Identity=26.4550264550265, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI46519147, Length=189, Percent_Identity=26.4550264550265, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI156142199, Length=160, Percent_Identity=29.375, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI156142197, Length=160, Percent_Identity=29.375, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI38683807, Length=221, Percent_Identity=21.7194570135747, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI30348954, Length=164, Percent_Identity=29.8780487804878, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI4506217, Length=132, Percent_Identity=31.0606060606061, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI32483404, Length=162, Percent_Identity=29.6296296296296, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI8051599, Length=162, Percent_Identity=29.6296296296296, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI18252778, Length=175, Percent_Identity=28, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI8051597, Length=162, Percent_Identity=29.6296296296296, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI8051595, Length=162, Percent_Identity=29.6296296296296, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI8051593, Length=162, Percent_Identity=29.6296296296296, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI156104901, Length=174, Percent_Identity=28.1609195402299, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI149363679, Length=174, Percent_Identity=28.1609195402299, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI121582655, Length=162, Percent_Identity=27.1604938271605, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI224465233, Length=209, Percent_Identity=24.4019138755981, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI60460920, Length=174, Percent_Identity=27.5862068965517, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI60115723, Length=174, Percent_Identity=27.5862068965517, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI38327522, Length=168, Percent_Identity=26.7857142857143, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI24233530, Length=157, Percent_Identity=28.6624203821656, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI239751514, Length=184, Percent_Identity=27.1739130434783, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI239756999, Length=184, Percent_Identity=27.1739130434783, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI239746016, Length=184, Percent_Identity=27.1739130434783, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI68131557, Length=218, Percent_Identity=24.3119266055046, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI267844887, Length=144, Percent_Identity=28.4722222222222, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI154091032, Length=150, Percent_Identity=27.3333333333333, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI217416350, Length=189, Percent_Identity=26.984126984127, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI217416347, Length=189, Percent_Identity=26.984126984127, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI310128938, Length=162, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI310120310, Length=162, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI18079216, Length=189, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI52426737, Length=154, Percent_Identity=27.9220779220779, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI188595682, Length=154, Percent_Identity=27.9220779220779, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI310133385, Length=163, Percent_Identity=26.9938650306748, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI52426735, Length=170, Percent_Identity=27.6470588235294, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI256222430, Length=163, Percent_Identity=28.2208588957055, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI157739945, Length=160, Percent_Identity=26.875, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI56550047, Length=159, Percent_Identity=27.0440251572327, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI59850762, Length=159, Percent_Identity=27.0440251572327, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI283549153, Length=174, Percent_Identity=25.2873563218391, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI212646035, Length=185, Percent_Identity=28.6486486486486, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI212646031, Length=185, Percent_Identity=28.6486486486486, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI212646033, Length=185, Percent_Identity=28.6486486486486, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI115533596, Length=165, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17555340, Length=173, Percent_Identity=28.9017341040462, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71981411, Length=174, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71981389, Length=174, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17542700, Length=174, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25145251, Length=174, Percent_Identity=27.5862068965517, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221330480, Length=156, Percent_Identity=32.0512820512821, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI45551135, Length=156, Percent_Identity=32.0512820512821, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI221330478, Length=156, Percent_Identity=32.0512820512821, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI281363919, Length=156, Percent_Identity=32.0512820512821, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI221330482, Length=156, Percent_Identity=32.0512820512821, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI221330474, Length=156, Percent_Identity=32.0512820512821, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28573593, Length=156, Percent_Identity=32.0512820512821, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45550479, Length=156, Percent_Identity=32.0512820512821, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI221330476, Length=156, Percent_Identity=32.0512820512821, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28571867, Length=188, Percent_Identity=25.531914893617, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28571865, Length=188, Percent_Identity=25.531914893617, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI161082092, Length=178, Percent_Identity=26.4044943820225, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281362676, Length=151, Percent_Identity=30.4635761589404, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581842, Length=172, Percent_Identity=29.0697674418605, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI281364453, Length=172, Percent_Identity=29.0697674418605, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI17998549, Length=160, Percent_Identity=28.125, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221472807, Length=160, Percent_Identity=28.125, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI45552223, Length=160, Percent_Identity=28.125, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI281359521, Length=148, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281359519, Length=148, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28558752, Length=148, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28558750, Length=148, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28558756, Length=148, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28558754, Length=148, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45550629, Length=151, Percent_Identity=27.1523178807947, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24650843, Length=160, Percent_Identity=27.5, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI161082089, Length=163, Percent_Identity=27.6073619631902, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI161082110, Length=167, Percent_Identity=27.5449101796407, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI161082085, Length=163, Percent_Identity=27.6073619631902, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 23806; Mature: 23806

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MIRILQPIIIVVLGVLSFYCTESKSLLKTSEKGQILALKQLLLEKTDPNVQNQNGETPLI
CCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEE
LATKFGYAEIVEILIQNQANVNLVDQTGKTAFHWSVKKRFLNIAEILLEAKTKVDAVDSN
EEECCCHHHHHHHHHCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC
KKTALVYVTKIGHADMVKLLITKQPNPNLQDRFENTAFMLSVRNQQMDVAEFLIQANANV
CCEEEEEEEECCCHHHHHHEEECCCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHCCCHH
LHRNFLGYSALDDANKPSMEKIKKLIEEKIK
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIRILQPIIIVVLGVLSFYCTESKSLLKTSEKGQILALKQLLLEKTDPNVQNQNGETPLI
CCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEE
LATKFGYAEIVEILIQNQANVNLVDQTGKTAFHWSVKKRFLNIAEILLEAKTKVDAVDSN
EEECCCHHHHHHHHHCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC
KKTALVYVTKIGHADMVKLLITKQPNPNLQDRFENTAFMLSVRNQQMDVAEFLIQANANV
CCEEEEEEEECCCHHHHHHEEECCCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHCCCHH
LHRNFLGYSALDDANKPSMEKIKKLIEEKIK
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]