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The map label for this gene is sufB [C]

Identifier: 183220749

GI number: 183220749

Start: 1415281

End: 1416675

Strand: Direct

Name: sufB [C]

Synonym: LEPBI_I1359

Alternate gene names: 183220749

Gene position: 1415281-1416675 (Clockwise)

Preceding gene: 183220748

Following gene: 183220751

Centisome position: 39.32

GC content: 43.08

Gene sequence:

>1395_bases
ATGGAATCTACAACAAACACGGACAAGACGAATGTTCAATTTTACCAAGCGGACAATTTTCCAAAAGGTTTGACGCGTAA
GGTTGTAGAGTCCATCTCCCATATCAAAAATGAACCTAGTTGGCTCGCTGAATTCCGTCTCAAAGCATTTGAGGTGTATG
AACAAAAGCCAATGCCAACCTGGGGTTTTATCCCGCAGTTTCATATCAATATTGATGACTATGTCCATTATGTTGGATCC
AACCAAAAGAAAAAAAAATCTTGGGATGAAGTAGATCCTGAAATCCTTCGTAGTTTTGAAAAACTAGGAATCCCCGAACA
CGAAAGAAAGTATTTGGCTGGGATCGAAACCATGAACGATTCCGAAACAATTTATGCCAATGTCAAAAAGGAACTCACTG
ATTTAGGAATCATTTTCTGTGATATCGACACTGCCATCCGCGAATACCCGGAACTTGTCCGTGAGTATTTGGGAACAGTT
GTCACGATTGGTGATAATAAATTCTCTGCTCTCAATTCATGTGTTTTCAGTGGAGGCTCTTTTGCCTACATCCCGAAAGG
GATAAAGACTCCTATGCCACTCCAAGCCTATTTTAAAGTAACTGCTGCTAGTTCCGGACAATATGAACGTACGCTTCTCA
TCGCCGATGAAGGGGCACACTTGGAATACAGCGAAGGTTGTACCTCTGTCCAAGACAAAGGCACTAATTTCCACACAGCC
GTTGTGGAACTTGTCGCCAAAAAGAATTCGAAAATTTTTTATACCACCATCCAAAACTGGAAAAAGAATATGTATAATTG
GACCGTCAAACGCGGTATCTGCGAAGAAGCGGCCCACATCACTTGGACGGATTGTAATATTGGTGCCAATACCATCAAAT
ACCCTGGGATCATTCTACAAGGGGACCACTCGACTGGGGATGTATTGTCCCTTGCCTTTGCGGGCAGTGGACAGGTGCAA
GATACAGGAGCGCGGATCATCCACGTTGGTAAAAACACACGTTCTAATATCTTAGCAAAAGGTGTAGCACTTGATGGTGG
GATCAATTCCTACCGAGGCCTAGTCAAGTTTGAACCTTCCAGCAAAGGATCTTATAGCCATATCAAATGTGATGGTCTGA
TGATGGACAACCGTTCCCAGTCACACGCCTATCCGTATAACGATGTATCAGGCGAAGAGGGAACTCTCAATTACGAAGCC
ACTGTTTCCAAAATTGACGATGACCAATTGTTTTACTTACAATCACGGGGTATGTCGGAAGACGATGCGAAACTACTCAT
CATCAATGGATTCTGTGAAGGTGTCACCAAACATCTCGATGTGGAGTATTCTGTGGAGATGACAAAACTCATTCGTATGA
TCTTAGAAGACGGAAAAGTCATCGCCGAAACGTAA

Upstream 100 bases:

>100_bases
AGGGAAAAAAACGATGAAAGCAGATCCTACAGGGTCCAAAGCTTACTTCGCTTCTGTAAATTAATTTCAATTTCTCTATC
AGTAGAGAATGGGAGAAACA

Downstream 100 bases:

>100_bases
AATCAAATTTTTGGTTTTTATTTTTTAAACACGAATACCCAAACAGCGCCTGCGGCGATGAGAAGTCCCAATGACTCTCG
CACTTCTTCCACCTCCATTC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MESTTNTDKTNVQFYQADNFPKGLTRKVVESISHIKNEPSWLAEFRLKAFEVYEQKPMPTWGFIPQFHINIDDYVHYVGS
NQKKKKSWDEVDPEILRSFEKLGIPEHERKYLAGIETMNDSETIYANVKKELTDLGIIFCDIDTAIREYPELVREYLGTV
VTIGDNKFSALNSCVFSGGSFAYIPKGIKTPMPLQAYFKVTAASSGQYERTLLIADEGAHLEYSEGCTSVQDKGTNFHTA
VVELVAKKNSKIFYTTIQNWKKNMYNWTVKRGICEEAAHITWTDCNIGANTIKYPGIILQGDHSTGDVLSLAFAGSGQVQ
DTGARIIHVGKNTRSNILAKGVALDGGINSYRGLVKFEPSSKGSYSHIKCDGLMMDNRSQSHAYPYNDVSGEEGTLNYEA
TVSKIDDDQLFYLQSRGMSEDDAKLLIINGFCEGVTKHLDVEYSVEMTKLIRMILEDGKVIAET

Sequences:

>Translated_464_residues
MESTTNTDKTNVQFYQADNFPKGLTRKVVESISHIKNEPSWLAEFRLKAFEVYEQKPMPTWGFIPQFHINIDDYVHYVGS
NQKKKKSWDEVDPEILRSFEKLGIPEHERKYLAGIETMNDSETIYANVKKELTDLGIIFCDIDTAIREYPELVREYLGTV
VTIGDNKFSALNSCVFSGGSFAYIPKGIKTPMPLQAYFKVTAASSGQYERTLLIADEGAHLEYSEGCTSVQDKGTNFHTA
VVELVAKKNSKIFYTTIQNWKKNMYNWTVKRGICEEAAHITWTDCNIGANTIKYPGIILQGDHSTGDVLSLAFAGSGQVQ
DTGARIIHVGKNTRSNILAKGVALDGGINSYRGLVKFEPSSKGSYSHIKCDGLMMDNRSQSHAYPYNDVSGEEGTLNYEA
TVSKIDDDQLFYLQSRGMSEDDAKLLIINGFCEGVTKHLDVEYSVEMTKLIRMILEDGKVIAET
>Mature_464_residues
MESTTNTDKTNVQFYQADNFPKGLTRKVVESISHIKNEPSWLAEFRLKAFEVYEQKPMPTWGFIPQFHINIDDYVHYVGS
NQKKKKSWDEVDPEILRSFEKLGIPEHERKYLAGIETMNDSETIYANVKKELTDLGIIFCDIDTAIREYPELVREYLGTV
VTIGDNKFSALNSCVFSGGSFAYIPKGIKTPMPLQAYFKVTAASSGQYERTLLIADEGAHLEYSEGCTSVQDKGTNFHTA
VVELVAKKNSKIFYTTIQNWKKNMYNWTVKRGICEEAAHITWTDCNIGANTIKYPGIILQGDHSTGDVLSLAFAGSGQVQ
DTGARIIHVGKNTRSNILAKGVALDGGINSYRGLVKFEPSSKGSYSHIKCDGLMMDNRSQSHAYPYNDVSGEEGTLNYEA
TVSKIDDDQLFYLQSRGMSEDDAKLLIINGFCEGVTKHLDVEYSVEMTKLIRMILEDGKVIAET

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=461, Percent_Identity=38.8286334056399, Blast_Score=353, Evalue=2e-98,
Organism=Escherichia coli, GI1787971, Length=144, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52026; Mature: 52026

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESTTNTDKTNVQFYQADNFPKGLTRKVVESISHIKNEPSWLAEFRLKAFEVYEQKPMPT
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
WGFIPQFHINIDDYVHYVGSNQKKKKSWDEVDPEILRSFEKLGIPEHERKYLAGIETMND
CCCCCEEEECHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCC
SETIYANVKKELTDLGIIFCDIDTAIREYPELVREYLGTVVTIGDNKFSALNSCVFSGGS
CCEEEEHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHCCCC
FAYIPKGIKTPMPLQAYFKVTAASSGQYERTLLIADEGAHLEYSEGCTSVQDKGTNFHTA
EEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEECCCCCCCHHHCCCCHHHH
VVELVAKKNSKIFYTTIQNWKKNMYNWTVKRGICEEAAHITWTDCNIGANTIKYPGIILQ
HHHHHHCCCCEEEEEEHHHHHHHHHEEHHHHHHHHHCCEEEEEECCCCCCCEECCCEEEE
GDHSTGDVLSLAFAGSGQVQDTGARIIHVGKNTRSNILAKGVALDGGINSYRGLVKFEPS
CCCCCCCEEEEEECCCCCEECCCCEEEEECCCCCHHHEEECEEECCCCHHCCCEEEECCC
SKGSYSHIKCDGLMMDNRSQSHAYPYNDVSGEEGTLNYEATVSKIDDDQLFYLQSRGMSE
CCCCCCEEEECEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCC
DDAKLLIINGFCEGVTKHLDVEYSVEMTKLIRMILEDGKVIAET
CCCEEEEEECHHHHHHHHCCCEEEHHHHHHHHHHHHCCEEEECC
>Mature Secondary Structure
MESTTNTDKTNVQFYQADNFPKGLTRKVVESISHIKNEPSWLAEFRLKAFEVYEQKPMPT
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
WGFIPQFHINIDDYVHYVGSNQKKKKSWDEVDPEILRSFEKLGIPEHERKYLAGIETMND
CCCCCEEEECHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCC
SETIYANVKKELTDLGIIFCDIDTAIREYPELVREYLGTVVTIGDNKFSALNSCVFSGGS
CCEEEEHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHCCCC
FAYIPKGIKTPMPLQAYFKVTAASSGQYERTLLIADEGAHLEYSEGCTSVQDKGTNFHTA
EEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCEECCCCCCCHHHCCCCHHHH
VVELVAKKNSKIFYTTIQNWKKNMYNWTVKRGICEEAAHITWTDCNIGANTIKYPGIILQ
HHHHHHCCCCEEEEEEHHHHHHHHHEEHHHHHHHHHCCEEEEEECCCCCCCEECCCEEEE
GDHSTGDVLSLAFAGSGQVQDTGARIIHVGKNTRSNILAKGVALDGGINSYRGLVKFEPS
CCCCCCCEEEEEECCCCCEECCCCEEEEECCCCCHHHEEECEEECCCCHHCCCEEEECCC
SKGSYSHIKCDGLMMDNRSQSHAYPYNDVSGEEGTLNYEATVSKIDDDQLFYLQSRGMSE
CCCCCCEEEECEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCC
DDAKLLIINGFCEGVTKHLDVEYSVEMTKLIRMILEDGKVIAET
CCCEEEEEECHHHHHHHHCCCEEEHHHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA