| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220720
Identifier: 183220720
GI number: 183220720
Start: 1384396
End: 1385091
Strand: Direct
Name: 183220720
Synonym: LEPBI_I1330
Alternate gene names: NA
Gene position: 1384396-1385091 (Clockwise)
Preceding gene: 183220713
Following gene: 183220724
Centisome position: 38.46
GC content: 45.83
Gene sequence:
>696_bases ATGGGAATCCAAAAAAAATTACTCTTTGTCTCCATTTCGCTAATTGGTCTTTTTTTTCTCATCTTGCTTATGCTCGGAGG GGACGACGAAGACGAAGCCCGTCGTAAAAAAGAAAAAGGGGCCGTTGCACTTTCTTTTTTAGGGGGAGGGCCAAGTAACC CGAAAGGCACCAATCGACTTGGTGTGCGTGGGGAAGATGCAGGTTCCATCTTTGATTCGGACTATTACAATGCGGGGGGG ATGAAATATGAAGACGATCCGAATATTGCTTCTGGCGAATCGGGCGAAATCCCCATCAACCCACAAACAGGGAAACCATA CCCACCTGAGGCCATGCAAGCCTTTGAGGATTTGCGGGAACAATTTCCAGACAATGATCTCATCCCCAAACGGATGACGG CCGAGGATAAAAAGAAACAATCTGAGTTCAACCAAAAGCTCACACGGGCCACAAACTCCGTATTTGGTGGAAGTCCAAAC GCAACGGACCTTACAACATATTATGGTCATGTGCGAAAACAAGGAAAGGACAGGCTTGAGATCATCAATTACCTCATTGA ATCCCAAGGCGGGGATGATCCTGAGATGGATAAAAAATTCCAGGAAATCTTAAAGAACATCCAATTCCAAAACGAACAAA TCGAAAAGGAAGCTGCCAATGCCTTTACAAAGGCAGGACTCCAACCACCTCCTTAG
Upstream 100 bases:
>100_bases AAAAAGAGAGAAAAGATATGCAGAGATAGGAAATTGGGTGTATAGAAGGAAAACGCATTCTGTTTCTCGTTTCCCTTCCA AGTTTTCAGGAATTCAATCT
Downstream 100 bases:
>100_bases GTTTCGTTGGAAAGGATGGGAAAACGGTAACTCGATTTTGGATCGAGTCCGTATTCGTCCAAATGGAACGAGGGAGGAAG CCTCTCTCGTTTCCATTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MGIQKKLLFVSISLIGLFFLILLMLGGDDEDEARRKKEKGAVALSFLGGGPSNPKGTNRLGVRGEDAGSIFDSDYYNAGG MKYEDDPNIASGESGEIPINPQTGKPYPPEAMQAFEDLREQFPDNDLIPKRMTAEDKKKQSEFNQKLTRATNSVFGGSPN ATDLTTYYGHVRKQGKDRLEIINYLIESQGGDDPEMDKKFQEILKNIQFQNEQIEKEAANAFTKAGLQPPP
Sequences:
>Translated_231_residues MGIQKKLLFVSISLIGLFFLILLMLGGDDEDEARRKKEKGAVALSFLGGGPSNPKGTNRLGVRGEDAGSIFDSDYYNAGG MKYEDDPNIASGESGEIPINPQTGKPYPPEAMQAFEDLREQFPDNDLIPKRMTAEDKKKQSEFNQKLTRATNSVFGGSPN ATDLTTYYGHVRKQGKDRLEIINYLIESQGGDDPEMDKKFQEILKNIQFQNEQIEKEAANAFTKAGLQPPP >Mature_230_residues GIQKKLLFVSISLIGLFFLILLMLGGDDEDEARRKKEKGAVALSFLGGGPSNPKGTNRLGVRGEDAGSIFDSDYYNAGGM KYEDDPNIASGESGEIPINPQTGKPYPPEAMQAFEDLREQFPDNDLIPKRMTAEDKKKQSEFNQKLTRATNSVFGGSPNA TDLTTYYGHVRKQGKDRLEIINYLIESQGGDDPEMDKKFQEILKNIQFQNEQIEKEAANAFTKAGLQPPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25569; Mature: 25438
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIQKKLLFVSISLIGLFFLILLMLGGDDEDEARRKKEKGAVALSFLGGGPSNPKGTNRL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC GVRGEDAGSIFDSDYYNAGGMKYEDDPNIASGESGEIPINPQTGKPYPPEAMQAFEDLRE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QFPDNDLIPKRMTAEDKKKQSEFNQKLTRATNSVFGGSPNATDLTTYYGHVRKQGKDRLE HCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHH IINYLIESQGGDDPEMDKKFQEILKNIQFQNEQIEKEAANAFTKAGLQPPP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GIQKKLLFVSISLIGLFFLILLMLGGDDEDEARRKKEKGAVALSFLGGGPSNPKGTNRL CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC GVRGEDAGSIFDSDYYNAGGMKYEDDPNIASGESGEIPINPQTGKPYPPEAMQAFEDLRE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QFPDNDLIPKRMTAEDKKKQSEFNQKLTRATNSVFGGSPNATDLTTYYGHVRKQGKDRLE HCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHH IINYLIESQGGDDPEMDKKFQEILKNIQFQNEQIEKEAANAFTKAGLQPPP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA