| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is mtnD [H]
Identifier: 183220698
GI number: 183220698
Start: 1362970
End: 1363509
Strand: Direct
Name: mtnD [H]
Synonym: LEPBI_I1308
Alternate gene names: 183220698
Gene position: 1362970-1363509 (Clockwise)
Preceding gene: 183220697
Following gene: 183220701
Centisome position: 37.86
GC content: 41.67
Gene sequence:
>540_bases ATGGAAATGGCAACGATAGTCAAAAAACAAGAAACGATCCAGGACAAAGACCAAGTGAAAGCATACCTGACCCAAAAAGG GCTTGTGTATGAATCTTACAAAACTCCTGAATCTTTGGATTTGATCCTCGGCCAAAAAGGTTTATCCGATGCGGAAAAAG AAGAAGTCCTTTCTGGTCTGGAATACCGATTTGACCAATTGAAAAAACAACATGGCTACAAAGCAAACGACCTTGTGGTC CTTCATGACGAAGTGCCAGGGATCAGTGACATGTTAGCTAAATTTGACAAACTTCACATCCATACAGATGAAGAAGTTCG TTACATCATTGATGGGAGTGGGATTTTTGGCTTCATCATTGACGGAGAACGATTTGAAGTCCATGTTGGGAAAGGTGATT TTATCTCCATCCCTGCCAATACAAACCACTGGTTCACATTGGACCAAACAATGCGGATCAAAGCCGTTCGATACTTTAAG GACAACTCAGGTTGGACACCCGTTTATGTGGATGAATCGAAAGTCCTCATCAATGCATAA
Upstream 100 bases:
>100_bases GGATCCCTTTTGTAATTCTGTTATAGCAGAATTACATCCAGGATAGCGAAAAACAAGTTGCTTCCCAATCCCAGGGGAAA AGGCTTGCCTAAGTAGGTAA
Downstream 100 bases:
>100_bases TTGTATTTGAACACTTCTTTTCTTGTATAAGAACCAAATCCTTCATTCGCCTGTTAGGCGGGTGATGGATTTTAGGATTC TGCTTTTCCAAACCATTCCA
Product: putative acireductone dioxygenase, ARD
Products: NA
Alternate protein names: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; DHK-MTPene dioxygenase; Acireductone dioxygenase (Fe(2+)-requiring); ARD'; Fe-ARD; Acireductone dioxygenase (Ni(2+)-requiring); ARD; Ni-ARD [H]
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MEMATIVKKQETIQDKDQVKAYLTQKGLVYESYKTPESLDLILGQKGLSDAEKEEVLSGLEYRFDQLKKQHGYKANDLVV LHDEVPGISDMLAKFDKLHIHTDEEVRYIIDGSGIFGFIIDGERFEVHVGKGDFISIPANTNHWFTLDQTMRIKAVRYFK DNSGWTPVYVDESKVLINA
Sequences:
>Translated_179_residues MEMATIVKKQETIQDKDQVKAYLTQKGLVYESYKTPESLDLILGQKGLSDAEKEEVLSGLEYRFDQLKKQHGYKANDLVV LHDEVPGISDMLAKFDKLHIHTDEEVRYIIDGSGIFGFIIDGERFEVHVGKGDFISIPANTNHWFTLDQTMRIKAVRYFK DNSGWTPVYVDESKVLINA >Mature_179_residues MEMATIVKKQETIQDKDQVKAYLTQKGLVYESYKTPESLDLILGQKGLSDAEKEEVLSGLEYRFDQLKKQHGYKANDLVV LHDEVPGISDMLAKFDKLHIHTDEEVRYIIDGSGIFGFIIDGERFEVHVGKGDFISIPANTNHWFTLDQTMRIKAVRYFK DNSGWTPVYVDESKVLINA
Specific function: Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- me
COG id: COG1791
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acireductone dioxygenase (ARD) family [H]
Homologues:
Organism=Homo sapiens, GI171460928, Length=120, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI161082987, Length=105, Percent_Identity=38.0952380952381, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004313 - InterPro: IPR011051 - InterPro: IPR014710 [H]
Pfam domain/function: PF03079 ARD [H]
EC number: =1.13.11.54; =1.13.11.53 [H]
Molecular weight: Translated: 20488; Mature: 20488
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMATIVKKQETIQDKDQVKAYLTQKGLVYESYKTPESLDLILGQKGLSDAEKEEVLSGL CCHHHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHH EYRFDQLKKQHGYKANDLVVLHDEVPGISDMLAKFDKLHIHTDEEVRYIIDGSGIFGFII HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHEEEECCCCEEEEEECCCEEEEEE DGERFEVHVGKGDFISIPANTNHWFTLDQTMRIKAVRYFKDNSGWTPVYVDESKVLINA ECCEEEEEECCCCEEEECCCCCCEEEECCCEEEEEEEEEECCCCCCEEEECCCEEEEEC >Mature Secondary Structure MEMATIVKKQETIQDKDQVKAYLTQKGLVYESYKTPESLDLILGQKGLSDAEKEEVLSGL CCHHHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHH EYRFDQLKKQHGYKANDLVVLHDEVPGISDMLAKFDKLHIHTDEEVRYIIDGSGIFGFII HHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHEEEECCCCEEEEEECCCEEEEEE DGERFEVHVGKGDFISIPANTNHWFTLDQTMRIKAVRYFKDNSGWTPVYVDESKVLINA ECCEEEEEECCCCEEEECCCCCCEEEECCCEEEEEEEEEECCCCCCEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA