| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220683
Identifier: 183220683
GI number: 183220683
Start: 1349122
End: 1349721
Strand: Direct
Name: 183220683
Synonym: LEPBI_I1293
Alternate gene names: NA
Gene position: 1349122-1349721 (Clockwise)
Preceding gene: 183220682
Following gene: 183220684
Centisome position: 37.48
GC content: 42.33
Gene sequence:
>600_bases ATGGGGACGAAACCGATGACGAAAGAAAATGATCCATCGATCAATTTAAAACGTCTCATCCTCCAAACGGTAGGATCGAT AGTCTTAGTACTTGTGATTGTGTTTGGTCTCGCCTATTTTTTTCGGCAAGAGTTACTCGGGTTTAGTGAACACTTCGTAC GGATGTTTGGGTTTGTCGGACTATTTTTTGGTATGGTACTATCCGATAGTTTACCTGCTTTTGTCCCACCCGATGCCTTT CTTATGCTTGCGATCACAGGTGAGATGGATCCATTAAAAACCATCTTATTTATGTCAGTTGGTAGTATCATCGGTGGAAG TATCGCCTATTGGATTGGACTTTACCTCATCCCACGTTTCCATTTGGGAAGGCAGATGGTTTTACACTATGAAGACAAAC TCCTCCCATACATTCGCAAATACGGATTTGGTGCTGTCGTTCTCAGTGCCCTCACACCCATTCCTTATTCCTGGATGGCC TATACAGTGGGCACATTTAAGATGCCATTTCGATTGTTTTTTTTAGGTTCTCTCTTTCGGTTTGTGCGAATCTCTGTTTA TTTTTATGCGATGTACATTGGTTGGATTACGGGAGGGTAA
Upstream 100 bases:
>100_bases ATTGGATCCGAACAAACCGCACCCTCATCCAAAAGGAATCCCGGTCATAAATGAAATTTGTTATTTTGGTGCGATCGAAT GCTAACTTAGGATCATTCCA
Downstream 100 bases:
>100_bases AATGTCCGAGGATCGTTTGTTTCCTAGATCAGTGGATGAAGTGATTTTGGAAAAGGTGAGGTTTTTCTTTTTACCGGATC GGACTGCTGCCTTTGTGAAA
Product: putative cytoplasmic membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MGTKPMTKENDPSINLKRLILQTVGSIVLVLVIVFGLAYFFRQELLGFSEHFVRMFGFVGLFFGMVLSDSLPAFVPPDAF LMLAITGEMDPLKTILFMSVGSIIGGSIAYWIGLYLIPRFHLGRQMVLHYEDKLLPYIRKYGFGAVVLSALTPIPYSWMA YTVGTFKMPFRLFFLGSLFRFVRISVYFYAMYIGWITGG
Sequences:
>Translated_199_residues MGTKPMTKENDPSINLKRLILQTVGSIVLVLVIVFGLAYFFRQELLGFSEHFVRMFGFVGLFFGMVLSDSLPAFVPPDAF LMLAITGEMDPLKTILFMSVGSIIGGSIAYWIGLYLIPRFHLGRQMVLHYEDKLLPYIRKYGFGAVVLSALTPIPYSWMA YTVGTFKMPFRLFFLGSLFRFVRISVYFYAMYIGWITGG >Mature_198_residues GTKPMTKENDPSINLKRLILQTVGSIVLVLVIVFGLAYFFRQELLGFSEHFVRMFGFVGLFFGMVLSDSLPAFVPPDAFL MLAITGEMDPLKTILFMSVGSIIGGSIAYWIGLYLIPRFHLGRQMVLHYEDKLLPYIRKYGFGAVVLSALTPIPYSWMAY TVGTFKMPFRLFFLGSLFRFVRISVYFYAMYIGWITGG
Specific function: Unknown
COG id: COG1238
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22596; Mature: 22465
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTKPMTKENDPSINLKRLILQTVGSIVLVLVIVFGLAYFFRQELLGFSEHFVRMFGFVG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFFGMVLSDSLPAFVPPDAFLMLAITGEMDPLKTILFMSVGSIIGGSIAYWIGLYLIPRF HHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLGRQMVLHYEDKLLPYIRKYGFGAVVLSALTPIPYSWMAYTVGTFKMPFRLFFLGSLFR HHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FVRISVYFYAMYIGWITGG HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GTKPMTKENDPSINLKRLILQTVGSIVLVLVIVFGLAYFFRQELLGFSEHFVRMFGFVG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFFGMVLSDSLPAFVPPDAFLMLAITGEMDPLKTILFMSVGSIIGGSIAYWIGLYLIPRF HHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLGRQMVLHYEDKLLPYIRKYGFGAVVLSALTPIPYSWMAYTVGTFKMPFRLFFLGSLFR HHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FVRISVYFYAMYIGWITGG HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA