| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220666
Identifier: 183220666
GI number: 183220666
Start: 1321551
End: 1323026
Strand: Direct
Name: 183220666
Synonym: LEPBI_I1276
Alternate gene names: NA
Gene position: 1321551-1323026 (Clockwise)
Preceding gene: 183220665
Following gene: 183220667
Centisome position: 36.71
GC content: 39.23
Gene sequence:
>1476_bases ATGGCAGAAACTTCCAAAAAAGTATTAGAGAAAAAAGGACAGGGCGAATACGAATTCACCGCTTATGGGGAATTTTTGTC CTATTTCCATGCCCATATTGATATTTTCAAACGCCTTCTGAAGGCCAAAAAAATGGACCCGACCAAAGTGGAAGAGGTCG CAAAACAAATCAAATCCTACATGACGGGAAATATCAAAAAGACGGATCAGTTTTTTGAACACCTGCCTCAATTTGCGACT TTGTTAGGTGTTTCGAAAGAAGAAGTTTCATCGTATCTCAATTCCAATTTCATCGATGTTTTGACGAAAGTCCAAGACAA ACTCAAAACCCAAGAATTAGAAAAACTCACCAATGCGCCGGCCCCTACTTATTCCTCCATCACGGAAGAAATTGTAGAAG GACTCCAAGTCACTCATCCTAAGGATTATGTGTTTGCCCAAAAAGGAATTCTGATGGTTTTGGAAAATCCGATCACAGGG GAAATCATTGAACCACAGGGTCTCATGGCAGCTTCCGCCAAAGCCGCGTTAGCCATGCCCGCAGGAAGTGATTCCGAAAA AGAGCCAGTTTCCTTAACAGAAGCACTTGCGGTTGCCAATGCTCCTCCGACTCCCATTGTCAAAAAACAATCGATCATTC CTGAAAAAGAAAAGTCCATCTTACAAGAAATCACAGAGACCTTTGCTGATATTTTAACTGGAGAACAGTTAGAAATCAAA ATTGGTCCTGAAGTGACAGAAACATCCCACCAAGAACCAAGTGCCAATACGAGCACAACAAAATCAGACGATGAGTATGA AATAGAAGATTTAGAGTTTGATGATTCTTCCGATTCCAAAAACGGAAATAGTAATCCTTCTGAAACTGCGGACGAACATG ATGATTTTTCGGATGACTTGGGCATTGAATACGAAGAAGAGTCTCCTCCACCTCCACCACAAGTTAACCTCAACTTAATA AGACTCGGTAATTTTTCGATCAAAGAATTTATGGATTTGGTACAAACAATTACCACCTACCAAACGAAGGCGGACCAAGT AGGATACCAAAATTGGTTACGCACCTTGTCTGAATTTGACAAAGCAGTGGTCTCTTTGAGAACACAAGTTCTAAAAGAAC AAAAAAATGAAGTCGTGGATTGGAATGCACTTTTCCAAATGATGAGCACTAAGTCAGAATTAAAACCTGATGTTTTGAAA GGCATTGTCAAAAAAATCAAAAATTTTCAAATCGTCAAACTGACGTTAGATCGTATGATTCAAGAATTCAAAAAAGGAAG TCCTGAATTTATGCAAATCGTCAAAATGGCTTGGCCACACATCCAAAAATCATTTTATGAAGTACCCAATTATGGGCAGG TGCAAACCTTACTGAAAGGGATCTTGTCCCGAGTGAATGATGAATCTCACAAAAAAGAATTTATGAAGATTTTTACCATG GCACTCAATTTCATCCAATCCAAATTTTTGGTGTAA
Upstream 100 bases:
>100_bases TTTCATAACACTAAGACTGGTCTCTCCTAGCATTTCGTCAATCGGTTCGTAAAAATCTTGACCCTTGTGACTTTTCCTAT GCATTGGATGAGATTCCCGT
Downstream 100 bases:
>100_bases GTGATGGAGCGAGAGAACCGTTCTCTCACCGGTTACCAAAAGAAAGAGAATTCTTTCCGTTGGTCTATGCGTTTGGGAAT TGGGTTTGTTACGCTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MAETSKKVLEKKGQGEYEFTAYGEFLSYFHAHIDIFKRLLKAKKMDPTKVEEVAKQIKSYMTGNIKKTDQFFEHLPQFAT LLGVSKEEVSSYLNSNFIDVLTKVQDKLKTQELEKLTNAPAPTYSSITEEIVEGLQVTHPKDYVFAQKGILMVLENPITG EIIEPQGLMAASAKAALAMPAGSDSEKEPVSLTEALAVANAPPTPIVKKQSIIPEKEKSILQEITETFADILTGEQLEIK IGPEVTETSHQEPSANTSTTKSDDEYEIEDLEFDDSSDSKNGNSNPSETADEHDDFSDDLGIEYEEESPPPPPQVNLNLI RLGNFSIKEFMDLVQTITTYQTKADQVGYQNWLRTLSEFDKAVVSLRTQVLKEQKNEVVDWNALFQMMSTKSELKPDVLK GIVKKIKNFQIVKLTLDRMIQEFKKGSPEFMQIVKMAWPHIQKSFYEVPNYGQVQTLLKGILSRVNDESHKKEFMKIFTM ALNFIQSKFLV
Sequences:
>Translated_491_residues MAETSKKVLEKKGQGEYEFTAYGEFLSYFHAHIDIFKRLLKAKKMDPTKVEEVAKQIKSYMTGNIKKTDQFFEHLPQFAT LLGVSKEEVSSYLNSNFIDVLTKVQDKLKTQELEKLTNAPAPTYSSITEEIVEGLQVTHPKDYVFAQKGILMVLENPITG EIIEPQGLMAASAKAALAMPAGSDSEKEPVSLTEALAVANAPPTPIVKKQSIIPEKEKSILQEITETFADILTGEQLEIK IGPEVTETSHQEPSANTSTTKSDDEYEIEDLEFDDSSDSKNGNSNPSETADEHDDFSDDLGIEYEEESPPPPPQVNLNLI RLGNFSIKEFMDLVQTITTYQTKADQVGYQNWLRTLSEFDKAVVSLRTQVLKEQKNEVVDWNALFQMMSTKSELKPDVLK GIVKKIKNFQIVKLTLDRMIQEFKKGSPEFMQIVKMAWPHIQKSFYEVPNYGQVQTLLKGILSRVNDESHKKEFMKIFTM ALNFIQSKFLV >Mature_490_residues AETSKKVLEKKGQGEYEFTAYGEFLSYFHAHIDIFKRLLKAKKMDPTKVEEVAKQIKSYMTGNIKKTDQFFEHLPQFATL LGVSKEEVSSYLNSNFIDVLTKVQDKLKTQELEKLTNAPAPTYSSITEEIVEGLQVTHPKDYVFAQKGILMVLENPITGE IIEPQGLMAASAKAALAMPAGSDSEKEPVSLTEALAVANAPPTPIVKKQSIIPEKEKSILQEITETFADILTGEQLEIKI GPEVTETSHQEPSANTSTTKSDDEYEIEDLEFDDSSDSKNGNSNPSETADEHDDFSDDLGIEYEEESPPPPPQVNLNLIR LGNFSIKEFMDLVQTITTYQTKADQVGYQNWLRTLSEFDKAVVSLRTQVLKEQKNEVVDWNALFQMMSTKSELKPDVLKG IVKKIKNFQIVKLTLDRMIQEFKKGSPEFMQIVKMAWPHIQKSFYEVPNYGQVQTLLKGILSRVNDESHKKEFMKIFTMA LNFIQSKFLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55520; Mature: 55389
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETSKKVLEKKGQGEYEFTAYGEFLSYFHAHIDIFKRLLKAKKMDPTKVEEVAKQIKSY CCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH MTGNIKKTDQFFEHLPQFATLLGVSKEEVSSYLNSNFIDVLTKVQDKLKTQELEKLTNAP HCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC APTYSSITEEIVEGLQVTHPKDYVFAQKGILMVLENPITGEIIEPQGLMAASAKAALAMP CCCHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCCCCCCEECCCCCHHHHCHHHEECC AGSDSEKEPVSLTEALAVANAPPTPIVKKQSIIPEKEKSILQEITETFADILTGEQLEIK CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE IGPEVTETSHQEPSANTSTTKSDDEYEIEDLEFDDSSDSKNGNSNPSETADEHDDFSDDL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GIEYEEESPPPPPQVNLNLIRLGNFSIKEFMDLVQTITTYQTKADQVGYQNWLRTLSEFD CCEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAVVSLRTQVLKEQKNEVVDWNALFQMMSTKSELKPDVLKGIVKKIKNFQIVKLTLDRMI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEHHHHHHHHH QEFKKGSPEFMQIVKMAWPHIQKSFYEVPNYGQVQTLLKGILSRVNDESHKKEFMKIFTM HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH ALNFIQSKFLV HHHHHHHHHCC >Mature Secondary Structure AETSKKVLEKKGQGEYEFTAYGEFLSYFHAHIDIFKRLLKAKKMDPTKVEEVAKQIKSY CCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH MTGNIKKTDQFFEHLPQFATLLGVSKEEVSSYLNSNFIDVLTKVQDKLKTQELEKLTNAP HCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC APTYSSITEEIVEGLQVTHPKDYVFAQKGILMVLENPITGEIIEPQGLMAASAKAALAMP CCCHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEECCCCCCCEECCCCCHHHHCHHHEECC AGSDSEKEPVSLTEALAVANAPPTPIVKKQSIIPEKEKSILQEITETFADILTGEQLEIK CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEE IGPEVTETSHQEPSANTSTTKSDDEYEIEDLEFDDSSDSKNGNSNPSETADEHDDFSDDL ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GIEYEEESPPPPPQVNLNLIRLGNFSIKEFMDLVQTITTYQTKADQVGYQNWLRTLSEFD CCEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAVVSLRTQVLKEQKNEVVDWNALFQMMSTKSELKPDVLKGIVKKIKNFQIVKLTLDRMI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEHHHHHHHHH QEFKKGSPEFMQIVKMAWPHIQKSFYEVPNYGQVQTLLKGILSRVNDESHKKEFMKIFTM HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH ALNFIQSKFLV HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA