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The map label for this gene is yggJ [C]

Identifier: 183220665

GI number: 183220665

Start: 1320499

End: 1321179

Strand: Direct

Name: yggJ [C]

Synonym: LEPBI_I1274

Alternate gene names: 183220665

Gene position: 1320499-1321179 (Clockwise)

Preceding gene: 183220664

Following gene: 183220666

Centisome position: 36.68

GC content: 40.09

Gene sequence:

>681_bases
TTGACGGAACCAGGTCTGATACTTTTCCGAAAACCTTTTTTTAAAAAAGAGTCCATTCAACTCACCAAAGAAGAGTTAAA
CCACCTAAGGGCTCTTCGCTTACAATCCGAAAACAATATCATACAAATTCGAGATGGGGAAGGTGGTCTATATAATTACC
TATACACTCCCAATTCTAAAGATCTTGTCTTCCAAAATGAAGAGTTTGTTCCAAGAAAAACAAACCGAAAAAAGATTGCG
ATCGCATTACCCAAAGGGAATCGTCTCGACTTTTTTTTACAAAAAGTAACAGAGATTGGTTTAGATGAAGTGATCTTTTT
GGTGTTTCGCCATTCCATTCGTAAGGAATTTAATTTGGAACGAGCGGAAAAAATCGTAAAGGAAGCAGCAGCCCAATCCA
AACAAACGGAAATTTTAAATCTATCGATAGAACCAGCCAAAGATTGGATGGAAACACATAAAGAAAGTTTGGTGGTGTTC
CATCCTTTTGGAAAGGACATATTTCAAATCCAAAGTTTAGCCGGGAAAATTCCGGTGATTGGACCAGAAGGTGGTTACCA
TGCAGACGAAGAGGAATGGATGGAAAAAAATCAAATCCCAAAACTCACACTGCCGGGTGGGGTGCTTCGGACAGAAACCT
GCGGCATCGTCGCCGCGAGTTTTTTGGTGTACGGAACTTAA

Upstream 100 bases:

>100_bases
TAGCATTACGGTTTGGGAAATCCAAGAAGTGGACAAAACAGTGAACCCAGACACATCTTTGTTTAACGTGGACAACTTAA
GCAGATAAAGTAGATCCACC

Downstream 100 bases:

>100_bases
AAAAAGATTACTGGTTTGTTAAAAGTAAAAGAGTTCCAGATAGGTTGCAGTTGGTGGAACAATTGCTGAAACAAGTAGAT
GCTGCCGTGTAATTTTCCCC

Product: 16S ribosomal RNA methyltransferase RsmE

Products: NA

Alternate protein names: 16S Ribosomal RNA Methyltransferase RsmE; Cytoplasmic Protein

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTEPGLILFRKPFFKKESIQLTKEELNHLRALRLQSENNIIQIRDGEGGLYNYLYTPNSKDLVFQNEEFVPRKTNRKKIA
IALPKGNRLDFFLQKVTEIGLDEVIFLVFRHSIRKEFNLERAEKIVKEAAAQSKQTEILNLSIEPAKDWMETHKESLVVF
HPFGKDIFQIQSLAGKIPVIGPEGGYHADEEEWMEKNQIPKLTLPGGVLRTETCGIVAASFLVYGT

Sequences:

>Translated_226_residues
MTEPGLILFRKPFFKKESIQLTKEELNHLRALRLQSENNIIQIRDGEGGLYNYLYTPNSKDLVFQNEEFVPRKTNRKKIA
IALPKGNRLDFFLQKVTEIGLDEVIFLVFRHSIRKEFNLERAEKIVKEAAAQSKQTEILNLSIEPAKDWMETHKESLVVF
HPFGKDIFQIQSLAGKIPVIGPEGGYHADEEEWMEKNQIPKLTLPGGVLRTETCGIVAASFLVYGT
>Mature_225_residues
TEPGLILFRKPFFKKESIQLTKEELNHLRALRLQSENNIIQIRDGEGGLYNYLYTPNSKDLVFQNEEFVPRKTNRKKIAI
ALPKGNRLDFFLQKVTEIGLDEVIFLVFRHSIRKEFNLERAEKIVKEAAAQSKQTEILNLSIEPAKDWMETHKESLVVFH
PFGKDIFQIQSLAGKIPVIGPEGGYHADEEEWMEKNQIPKLTLPGGVLRTETCGIVAASFLVYGT

Specific function: Unknown

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25900; Mature: 25769

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPGLILFRKPFFKKESIQLTKEELNHLRALRLQSENNIIQIRDGEGGLYNYLYTPNSK
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEEEECCCCC
DLVFQNEEFVPRKTNRKKIAIALPKGNRLDFFLQKVTEIGLDEVIFLVFRHSIRKEFNLE
CEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHH
RAEKIVKEAAAQSKQTEILNLSIEPAKDWMETHKESLVVFHPFGKDIFQIQSLAGKIPVI
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCEE
GPEGGYHADEEEWMEKNQIPKLTLPGGVLRTETCGIVAASFLVYGT
CCCCCCCCCHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHEECC
>Mature Secondary Structure 
TEPGLILFRKPFFKKESIQLTKEELNHLRALRLQSENNIIQIRDGEGGLYNYLYTPNSK
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEEEECCCCC
DLVFQNEEFVPRKTNRKKIAIALPKGNRLDFFLQKVTEIGLDEVIFLVFRHSIRKEFNLE
CEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHH
RAEKIVKEAAAQSKQTEILNLSIEPAKDWMETHKESLVVFHPFGKDIFQIQSLAGKIPVI
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCEE
GPEGGYHADEEEWMEKNQIPKLTLPGGVLRTETCGIVAASFLVYGT
CCCCCCCCCHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA