Click here to switch to the map view.

The map label for this gene is yggW [C]

Identifier: 183220661

GI number: 183220661

Start: 1314979

End: 1316910

Strand: Direct

Name: yggW [C]

Synonym: LEPBI_I1270

Alternate gene names: 183220661

Gene position: 1314979-1316910 (Clockwise)

Preceding gene: 183220660

Following gene: 183220663

Centisome position: 36.53

GC content: 42.39

Gene sequence:

>1932_bases
TTGGTAAGAGATATGGCAAAAATCCAGTTTTTGCAATTACCCGTGCCACCCCCAAGTTATTTTGCGGCCACTGGCAATGT
TCCCCTAGCAGCTGCTAGTTTAGCAAGTTGTTTAGAATCCAAGCAAGATCCTATCCTTGGGATTTCACCGATTGTCATTC
CACCGGAAGATACTGATTCCCTTGGGGATTTAGATTTAATCGATCGGATTTGTAAAGAAGGTCCCGATTTTTTGGGTTTG
TCTTTGTACTTATGGAATACGGAACGAAGTTTATACATCGCAAAAGAAGTCAAAAAAAGAAATCCAGACATTCAAATCCT
CATTGGAGGACCCGAGGTCAATGAAGACAATCCCTATGTTTTAGGCGAAACTGGTTTTGATATCGCCGTTTCTGGGGAAG
CGGAACATAGCTTTCGAAGTCTCATGAAGGGATTATTAAACAAGGAATCGCTTGAAAATTTTGAAAATGTAGCTCACCGA
AAATCAGATGGGACTTTGAGTCCATTTGGAGTCTCCGTCCCTGCTAACTTTCCTTTGACGGATTTCCCGTCGCCTTATAC
AACAGGGCACTTACAAGTGAATCCAAAACGTTCTACCTATTTGGAAACTGTGAGAGGTTGTAAGTCACAGTGTACGTATT
GTTTTTATCCAAAATCATCACAAAGTTTACGAACATTGGATATCAAAGAAACCATCCATTTGATTTCCAACTTAAAAGGA
AAAGGGGCAAAGGAACTTGTATTTTTAGACCCAACCTTTAACCATCGCCCTGGTTTTGAATCCTTTTTAGATGCCATTGC
AGAAGTGAATGCTGATGGCCAAATGACGATGTTTGCAGAACTTCGGTCAGAAGGTGTCACTCCTAAACTTGCCACCAAAC
TTCGAAAAGCTGGATTCAATCGGATCGAACTTGGACTACAATCGGTCAATGAAGAAACATTAAAACGTGTCAAACGTTAT
GGCAGTCCCCATAAGGTGGCAGAAGTAGCAAAGATGCTTGCGGGTGAAGGGATTGATTTACTCCTTGATCTCATCATTGG
ACTTCCTGGGGACACACCGGATGATGTCGAACGAGGGATTCATTTTTTCTTAGAACATGGGCTTGGGGAATGGGTGCAGG
CCTTTCCCCTTTCTGTACTACCTGGCACGAGTATGCGTAAAGATGCTAAAAAAGAAGGCCTGATTTTTATGCCAACGCCA
CCGTACCGTATTTTAGAAACTCCAACCTTTAGCCAAGAGGCCTTACGTGATTCGGTGTACTTTGCTGAGGACCTCCTTGA
ACGCAGGTTAGACGAATTTCCGAGACCATTTTTATGTGAATGGAATCCGAAGGTTTCAGACCGGTTTGATTGGTATCCAG
AGAATTCGACTGAAAAGAGAAAACTGGCATCCTTTCAATCGATGGAACGCGGGACAAGGCACCAAAGTATTTGGTTCCAT
CCAGAAACTCTTTCAAAAAACTTGGCTCAAATCCTAAACTCCATGGGAGAAAAAATTGAAAAGGAACCTTTTTGTACCAT
TGATTTTGTGATCGAACTAGTTGAAGTTCCAAATACAAAGGACATCCAATCGATCGAAACCTTTCTTGATTCCAAACGGA
AATCCTATCTTTCCCGAACACTTGCCTATCGGGGGGAAAACTTACAACACCGTTTGGTATTTGTGATTCCAAGAGAAATG
GAACCACTCAGGAATTGGCGTAACTCTTTGGATGGCAGTGAATCATTTCTTGTATACGAAACCATACCAGCTGAAAGCAT
CCAATCCTTAGACCCAGAAGAATCCCATTTTTATCTGGTAGAAGGGGAGAGGATCACACCAAAGGACTGGGCGCATTTGA
AAGATACGATGGATCCCGAGACCATTAACTTTGTGTCCCGAAAATGGGAAGAACGATGGTCGATCGAAGTATTAGGATAC
GGGGAAATTTAA

Upstream 100 bases:

>100_bases
GTACATTTGCGAGAAACCTTTCCGAAAATTTGATATTATTTATCGATGTGGTCGTGTCTCGTAGCTGAAAGTTTTTGCAG
TCTGGTTCGAACCATGAATC

Downstream 100 bases:

>100_bases
AGCGAAACGGCCGTTTAATTTTTTTGAAGCTGTTTTCGAAAGAATTCTACGTTTTCGAGAAATCTTTTTTTCTCACCAGA
ACGGGAAGAGTGGCCCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 643; Mature: 643

Protein sequence:

>643_residues
MVRDMAKIQFLQLPVPPPSYFAATGNVPLAAASLASCLESKQDPILGISPIVIPPEDTDSLGDLDLIDRICKEGPDFLGL
SLYLWNTERSLYIAKEVKKRNPDIQILIGGPEVNEDNPYVLGETGFDIAVSGEAEHSFRSLMKGLLNKESLENFENVAHR
KSDGTLSPFGVSVPANFPLTDFPSPYTTGHLQVNPKRSTYLETVRGCKSQCTYCFYPKSSQSLRTLDIKETIHLISNLKG
KGAKELVFLDPTFNHRPGFESFLDAIAEVNADGQMTMFAELRSEGVTPKLATKLRKAGFNRIELGLQSVNEETLKRVKRY
GSPHKVAEVAKMLAGEGIDLLLDLIIGLPGDTPDDVERGIHFFLEHGLGEWVQAFPLSVLPGTSMRKDAKKEGLIFMPTP
PYRILETPTFSQEALRDSVYFAEDLLERRLDEFPRPFLCEWNPKVSDRFDWYPENSTEKRKLASFQSMERGTRHQSIWFH
PETLSKNLAQILNSMGEKIEKEPFCTIDFVIELVEVPNTKDIQSIETFLDSKRKSYLSRTLAYRGENLQHRLVFVIPREM
EPLRNWRNSLDGSESFLVYETIPAESIQSLDPEESHFYLVEGERITPKDWAHLKDTMDPETINFVSRKWEERWSIEVLGY
GEI

Sequences:

>Translated_643_residues
MVRDMAKIQFLQLPVPPPSYFAATGNVPLAAASLASCLESKQDPILGISPIVIPPEDTDSLGDLDLIDRICKEGPDFLGL
SLYLWNTERSLYIAKEVKKRNPDIQILIGGPEVNEDNPYVLGETGFDIAVSGEAEHSFRSLMKGLLNKESLENFENVAHR
KSDGTLSPFGVSVPANFPLTDFPSPYTTGHLQVNPKRSTYLETVRGCKSQCTYCFYPKSSQSLRTLDIKETIHLISNLKG
KGAKELVFLDPTFNHRPGFESFLDAIAEVNADGQMTMFAELRSEGVTPKLATKLRKAGFNRIELGLQSVNEETLKRVKRY
GSPHKVAEVAKMLAGEGIDLLLDLIIGLPGDTPDDVERGIHFFLEHGLGEWVQAFPLSVLPGTSMRKDAKKEGLIFMPTP
PYRILETPTFSQEALRDSVYFAEDLLERRLDEFPRPFLCEWNPKVSDRFDWYPENSTEKRKLASFQSMERGTRHQSIWFH
PETLSKNLAQILNSMGEKIEKEPFCTIDFVIELVEVPNTKDIQSIETFLDSKRKSYLSRTLAYRGENLQHRLVFVIPREM
EPLRNWRNSLDGSESFLVYETIPAESIQSLDPEESHFYLVEGERITPKDWAHLKDTMDPETINFVSRKWEERWSIEVLGY
GEI
>Mature_643_residues
MVRDMAKIQFLQLPVPPPSYFAATGNVPLAAASLASCLESKQDPILGISPIVIPPEDTDSLGDLDLIDRICKEGPDFLGL
SLYLWNTERSLYIAKEVKKRNPDIQILIGGPEVNEDNPYVLGETGFDIAVSGEAEHSFRSLMKGLLNKESLENFENVAHR
KSDGTLSPFGVSVPANFPLTDFPSPYTTGHLQVNPKRSTYLETVRGCKSQCTYCFYPKSSQSLRTLDIKETIHLISNLKG
KGAKELVFLDPTFNHRPGFESFLDAIAEVNADGQMTMFAELRSEGVTPKLATKLRKAGFNRIELGLQSVNEETLKRVKRY
GSPHKVAEVAKMLAGEGIDLLLDLIIGLPGDTPDDVERGIHFFLEHGLGEWVQAFPLSVLPGTSMRKDAKKEGLIFMPTP
PYRILETPTFSQEALRDSVYFAEDLLERRLDEFPRPFLCEWNPKVSDRFDWYPENSTEKRKLASFQSMERGTRHQSIWFH
PETLSKNLAQILNSMGEKIEKEPFCTIDFVIELVEVPNTKDIQSIETFLDSKRKSYLSRTLAYRGENLQHRLVFVIPREM
EPLRNWRNSLDGSESFLVYETIPAESIQSLDPEESHFYLVEGERITPKDWAHLKDTMDPETINFVSRKWEERWSIEVLGY
GEI

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 72947; Mature: 72947

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRDMAKIQFLQLPVPPPSYFAATGNVPLAAASLASCLESKQDPILGISPIVIPPEDTDS
CCCCCCCEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCC
LGDLDLIDRICKEGPDFLGLSLYLWNTERSLYIAKEVKKRNPDIQILIGGPEVNEDNPYV
CCCHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEHHHHHCCCCEEEEECCCCCCCCCCEE
LGETGFDIAVSGEAEHSFRSLMKGLLNKESLENFENVAHRKSDGTLSPFGVSVPANFPLT
EECCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCC
DFPSPYTTGHLQVNPKRSTYLETVRGCKSQCTYCFYPKSSQSLRTLDIKETIHLISNLKG
CCCCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEECCCCCCCEEEEHHHHHHHHHHCCCC
KGAKELVFLDPTFNHRPGFESFLDAIAEVNADGQMTMFAELRSEGVTPKLATKLRKAGFN
CCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHCCCCHHHHHHHHHCCCC
RIELGLQSVNEETLKRVKRYGSPHKVAEVAKMLAGEGIDLLLDLIIGLPGDTPDDVERGI
HHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHH
HFFLEHGLGEWVQAFPLSVLPGTSMRKDAKKEGLIFMPTPPYRILETPTFSQEALRDSVY
HHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHCCEEEECCCCCCEECCCCCCHHHHHHHHH
FAEDLLERRLDEFPRPFLCEWNPKVSDRFDWYPENSTEKRKLASFQSMERGTRHQSIWFH
HHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEC
PETLSKNLAQILNSMGEKIEKEPFCTIDFVIELVEVPNTKDIQSIETFLDSKRKSYLSRT
HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LAYRGENLQHRLVFVIPREMEPLRNWRNSLDGSESFLVYETIPAESIQSLDPEESHFYLV
HHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCEEEEE
EGERITPKDWAHLKDTMDPETINFVSRKWEERWSIEVLGYGEI
ECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCC
>Mature Secondary Structure
MVRDMAKIQFLQLPVPPPSYFAATGNVPLAAASLASCLESKQDPILGISPIVIPPEDTDS
CCCCCCCEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCC
LGDLDLIDRICKEGPDFLGLSLYLWNTERSLYIAKEVKKRNPDIQILIGGPEVNEDNPYV
CCCHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEHHHHHCCCCEEEEECCCCCCCCCCEE
LGETGFDIAVSGEAEHSFRSLMKGLLNKESLENFENVAHRKSDGTLSPFGVSVPANFPLT
EECCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCC
DFPSPYTTGHLQVNPKRSTYLETVRGCKSQCTYCFYPKSSQSLRTLDIKETIHLISNLKG
CCCCCCCCCEEEECCCHHHHHHHHHHHHHCCEEEECCCCCCCEEEEHHHHHHHHHHCCCC
KGAKELVFLDPTFNHRPGFESFLDAIAEVNADGQMTMFAELRSEGVTPKLATKLRKAGFN
CCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHCCCCHHHHHHHHHCCCC
RIELGLQSVNEETLKRVKRYGSPHKVAEVAKMLAGEGIDLLLDLIIGLPGDTPDDVERGI
HHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHH
HFFLEHGLGEWVQAFPLSVLPGTSMRKDAKKEGLIFMPTPPYRILETPTFSQEALRDSVY
HHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHCCEEEECCCCCCEECCCCCCHHHHHHHHH
FAEDLLERRLDEFPRPFLCEWNPKVSDRFDWYPENSTEKRKLASFQSMERGTRHQSIWFH
HHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEC
PETLSKNLAQILNSMGEKIEKEPFCTIDFVIELVEVPNTKDIQSIETFLDSKRKSYLSRT
HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LAYRGENLQHRLVFVIPREMEPLRNWRNSLDGSESFLVYETIPAESIQSLDPEESHFYLV
HHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCEEEEE
EGERITPKDWAHLKDTMDPETINFVSRKWEERWSIEVLGYGEI
ECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]