| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220652
Identifier: 183220652
GI number: 183220652
Start: 1306269
End: 1307036
Strand: Direct
Name: 183220652
Synonym: LEPBI_I1260
Alternate gene names: NA
Gene position: 1306269-1307036 (Clockwise)
Preceding gene: 183220651
Following gene: 183220653
Centisome position: 36.29
GC content: 40.49
Gene sequence:
>768_bases ATGAAGTTGATTTGGCGTTGGTTTGACAATGTGAACTGGGCCATTGGATATCGGTTGCCAGAAATGGAACGAGTGAAACG TCTGCACCATAATGGAATCAAAAACTTTACCACTCTCAATTATGCACACAAAAAGAATATGGCAAAGTCGCTCAATGATT GGACGTATGCCAATTTCCGAAACTGGGAAGGGGCCATACCGTTTGGAACCTTTTATCCCGAAGAGGGAGTGTTAAACTAT GTGAAACAGGCAGTCGAGGAATATGGATTTTTAGGATTCAAACTCCACTGTGAAGTATCCAAACTCAATTTAAATGATCC AGAACTCAGAGATTGTTTTTTGTATTTGGAAACAAAACAAATCCCCATTGTGGTTCATACAGGAACAGCTCCACTTCCTG GTGAATTTACAGGGATTCATTTTTTTAAACCCTTCATTCAAACCTATCCCAAGTTACACGTTATTGTTGCTCATATGGGT GCCCATGAAATTTCCGCCTATGCCTCGTTACTTGGTGATTATCCTCAATTGGCACTTGATACAACCATGGTGTTTGTGGA CTTTCTTGCGACAGGAAACGCTTCTGATGTGGATTCTGCCATCCCATTGCTTGAAACATTCCAAGACCAAATTTACTTTG GATCCGACTTTCCGAATCTCCCTTACAATCTAAACCACCCCATTTCGAAAATTCTCGACTTACCGATCTCAGACAAAGCC AAACAAAAAATCCTCTACCAAAACGCAAAAAACCGATTTTTCAAATGA
Upstream 100 bases:
>100_bases CATTCTAGACAAAGAAATCCCTGACCACTTAGAACGAATTTCAGAGTTAGGAATCCCTTATGTTTTTGATATCCACACAC ATTTTTTTCCAGAAACCATC
Downstream 100 bases:
>100_bases AACGTGGTTGCATTTGCAACAGCGTTGCAAATGATAGGCAAACAGAGGTAGTGATGAAATTCTTACAACCAATCATAATT TTTTCGATTCTTTTGACTCT
Product: putative metal-dependent hydrolase
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase; Amidase; TIM-Barrel Fold Metal-Dependent Hydrolase; Amidohydrolase Family 2 Protein
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKLIWRWFDNVNWAIGYRLPEMERVKRLHHNGIKNFTTLNYAHKKNMAKSLNDWTYANFRNWEGAIPFGTFYPEEGVLNY VKQAVEEYGFLGFKLHCEVSKLNLNDPELRDCFLYLETKQIPIVVHTGTAPLPGEFTGIHFFKPFIQTYPKLHVIVAHMG AHEISAYASLLGDYPQLALDTTMVFVDFLATGNASDVDSAIPLLETFQDQIYFGSDFPNLPYNLNHPISKILDLPISDKA KQKILYQNAKNRFFK
Sequences:
>Translated_255_residues MKLIWRWFDNVNWAIGYRLPEMERVKRLHHNGIKNFTTLNYAHKKNMAKSLNDWTYANFRNWEGAIPFGTFYPEEGVLNY VKQAVEEYGFLGFKLHCEVSKLNLNDPELRDCFLYLETKQIPIVVHTGTAPLPGEFTGIHFFKPFIQTYPKLHVIVAHMG AHEISAYASLLGDYPQLALDTTMVFVDFLATGNASDVDSAIPLLETFQDQIYFGSDFPNLPYNLNHPISKILDLPISDKA KQKILYQNAKNRFFK >Mature_255_residues MKLIWRWFDNVNWAIGYRLPEMERVKRLHHNGIKNFTTLNYAHKKNMAKSLNDWTYANFRNWEGAIPFGTFYPEEGVLNY VKQAVEEYGFLGFKLHCEVSKLNLNDPELRDCFLYLETKQIPIVVHTGTAPLPGEFTGIHFFKPFIQTYPKLHVIVAHMG AHEISAYASLLGDYPQLALDTTMVFVDFLATGNASDVDSAIPLLETFQDQIYFGSDFPNLPYNLNHPISKILDLPISDKA KQKILYQNAKNRFFK
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29471; Mature: 29471
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIWRWFDNVNWAIGYRLPEMERVKRLHHNGIKNFTTLNYAHKKNMAKSLNDWTYANFR CCEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCCCCC NWEGAIPFGTFYPEEGVLNYVKQAVEEYGFLGFKLHCEVSKLNLNDPELRDCFLYLETKQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHEEEEEECCC IPIVVHTGTAPLPGEFTGIHFFKPFIQTYPKLHVIVAHMGAHEISAYASLLGDYPQLALD EEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHH TTMVFVDFLATGNASDVDSAIPLLETFQDQIYFGSDFPNLPYNLNHPISKILDLPISDKA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHCCCCCCHH KQKILYQNAKNRFFK HHHHHHHHHHHCCCC >Mature Secondary Structure MKLIWRWFDNVNWAIGYRLPEMERVKRLHHNGIKNFTTLNYAHKKNMAKSLNDWTYANFR CCEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCCCCC NWEGAIPFGTFYPEEGVLNYVKQAVEEYGFLGFKLHCEVSKLNLNDPELRDCFLYLETKQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHEEEEEECCC IPIVVHTGTAPLPGEFTGIHFFKPFIQTYPKLHVIVAHMGAHEISAYASLLGDYPQLALD EEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHH TTMVFVDFLATGNASDVDSAIPLLETFQDQIYFGSDFPNLPYNLNHPISKILDLPISDKA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHCCCCCCHH KQKILYQNAKNRFFK HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA