| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220607
Identifier: 183220607
GI number: 183220607
Start: 1264804
End: 1265751
Strand: Reverse
Name: 183220607
Synonym: LEPBI_I1213
Alternate gene names: NA
Gene position: 1265751-1264804 (Counterclockwise)
Preceding gene: 183220609
Following gene: 183220606
Centisome position: 35.16
GC content: 37.34
Gene sequence:
>948_bases ATGAACGCAAAGAAACAACGGATTTTTATTTTTGTCTCAGTATTTTGTTTATTGATCTTAATATTAATAGATTGCCAAAA ATTAGAAATTAATAATATATGCGATCCACGTTCAGATGCCTTTAAAGAAGTTCAGGTTTCTAAGATCATTGCAAAAGATA TTTCTCCTGTTTGTAGTAAAGATTATATATCAACGATTATCCTTTATTCAATCTCTGGTTCTGTCACCGGTTTAATCAGT TCAGGATTGAAACTTTCTCTCAATGGAATTGTTCTGTTATCTGTTGAAAGTGGCAGTAAAAATTTTTACTTTATGAACAT ATTAACGAGTGGATCTTCGTATTCCGTAAAAGTTTTCAATCAACCTGCGGGTTTTTTCTGTTCTGTCACTAATGGTGATG GTTTCGTAAAAAATTCTGATGTGGATGCAGTTTCCGTTATTTGTTCTCCCACATGTAATCCATGTAATCTTTTTCTTACA AATTCTGGATACCCTCCGAACCCAGGAAGTGCGAAAAATTTTGATACTTCCTGCATGGCTGATGGGAATTATCCTGGAAC AGGAAACTATAAAGCAATGGTTGTGGACGGTGTAACGAGAAGCGCATCTACTAGTGCCAATCTCGGTGACGGACAAATTG ATTGGGTTTTCGCGCCGAATCGTACATATCGCCAATTTGAAGGAGTGATTGGAACGACAAATTCGACCGGATTATTCACT TCTGCACTATCATTGAGATTTTCTGCCAATTCAAAGTATTGGACTGGATTGAATGGCAATTGGACAACCAATACGAGCAA TACCTGTGATTTATGGAGGAGTAATTCTGGATCCTTTACGGGAGGTATGGGCCAAGGTAATTCAACTCTGATTGCCGACA TTACAGCAGGTTGGACTCCTGATGCATGCAATTTGTATAATCAACAGTTGATCTGCGTTGAGCAATAA
Upstream 100 bases:
>100_bases ATAAATTCAACACAAATCCATATCAATTACACTATTTAGTAAGCAATAAATTGTTGCTTACTAAATAGGAATTCAAAAAT CTTCTAAAAGAGGCTTCGAA
Downstream 100 bases:
>100_bases TACCTTATCTTGGATTTTATTTCTTCCATCTTTATTTATCATTTGATCGGAGAATGATTTATTGTTTATTCCACCTTCAA TCTAATTATTTAGCACAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MNAKKQRIFIFVSVFCLLILILIDCQKLEINNICDPRSDAFKEVQVSKIIAKDISPVCSKDYISTIILYSISGSVTGLIS SGLKLSLNGIVLLSVESGSKNFYFMNILTSGSSYSVKVFNQPAGFFCSVTNGDGFVKNSDVDAVSVICSPTCNPCNLFLT NSGYPPNPGSAKNFDTSCMADGNYPGTGNYKAMVVDGVTRSASTSANLGDGQIDWVFAPNRTYRQFEGVIGTTNSTGLFT SALSLRFSANSKYWTGLNGNWTTNTSNTCDLWRSNSGSFTGGMGQGNSTLIADITAGWTPDACNLYNQQLICVEQ
Sequences:
>Translated_315_residues MNAKKQRIFIFVSVFCLLILILIDCQKLEINNICDPRSDAFKEVQVSKIIAKDISPVCSKDYISTIILYSISGSVTGLIS SGLKLSLNGIVLLSVESGSKNFYFMNILTSGSSYSVKVFNQPAGFFCSVTNGDGFVKNSDVDAVSVICSPTCNPCNLFLT NSGYPPNPGSAKNFDTSCMADGNYPGTGNYKAMVVDGVTRSASTSANLGDGQIDWVFAPNRTYRQFEGVIGTTNSTGLFT SALSLRFSANSKYWTGLNGNWTTNTSNTCDLWRSNSGSFTGGMGQGNSTLIADITAGWTPDACNLYNQQLICVEQ >Mature_315_residues MNAKKQRIFIFVSVFCLLILILIDCQKLEINNICDPRSDAFKEVQVSKIIAKDISPVCSKDYISTIILYSISGSVTGLIS SGLKLSLNGIVLLSVESGSKNFYFMNILTSGSSYSVKVFNQPAGFFCSVTNGDGFVKNSDVDAVSVICSPTCNPCNLFLT NSGYPPNPGSAKNFDTSCMADGNYPGTGNYKAMVVDGVTRSASTSANLGDGQIDWVFAPNRTYRQFEGVIGTTNSTGLFT SALSLRFSANSKYWTGLNGNWTTNTSNTCDLWRSNSGSFTGGMGQGNSTLIADITAGWTPDACNLYNQQLICVEQ
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33853; Mature: 33853
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKKQRIFIFVSVFCLLILILIDCQKLEINNICDPRSDAFKEVQVSKIIAKDISPVCSK CCCCCEEEEEEHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHCH DYISTIILYSISGSVTGLISSGLKLSLNGIVLLSVESGSKNFYFMNILTSGSSYSVKVFN HHHEEEEEEEECCCEEEHECCCEEEEECCEEEEEEECCCCCEEEEEEEECCCCEEEEEEE QPAGFFCSVTNGDGFVKNSDVDAVSVICSPTCNPCNLFLTNSGYPPNPGSAKNFDTSCMA CCCCEEEEEECCCCEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE DGNYPGTGNYKAMVVDGVTRSASTSANLGDGQIDWVFAPNRTYRQFEGVIGTTNSTGLFT CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCEEECCCCCCEEE SALSLRFSANSKYWTGLNGNWTTNTSNTCDLWRSNSGSFTGGMGQGNSTLIADITAGWTP EEEEEEEECCCCEEECCCCCEECCCCCCEEEEECCCCCEECCCCCCCCEEEEEEECCCCC DACNLYNQQLICVEQ CHHHHCCCEEEEEEC >Mature Secondary Structure MNAKKQRIFIFVSVFCLLILILIDCQKLEINNICDPRSDAFKEVQVSKIIAKDISPVCSK CCCCCEEEEEEHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHCH DYISTIILYSISGSVTGLISSGLKLSLNGIVLLSVESGSKNFYFMNILTSGSSYSVKVFN HHHEEEEEEEECCCEEEHECCCEEEEECCEEEEEEECCCCCEEEEEEEECCCCEEEEEEE QPAGFFCSVTNGDGFVKNSDVDAVSVICSPTCNPCNLFLTNSGYPPNPGSAKNFDTSCMA CCCCEEEEEECCCCEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE DGNYPGTGNYKAMVVDGVTRSASTSANLGDGQIDWVFAPNRTYRQFEGVIGTTNSTGLFT CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCEEECCCCCCEEE SALSLRFSANSKYWTGLNGNWTTNTSNTCDLWRSNSGSFTGGMGQGNSTLIADITAGWTP EEEEEEEECCCCEEECCCCCEECCCCCCEEEEECCCCCEECCCCCCCCEEEEEEECCCCC DACNLYNQQLICVEQ CHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA