| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220609
Identifier: 183220609
GI number: 183220609
Start: 1266752
End: 1267837
Strand: Reverse
Name: 183220609
Synonym: LEPBI_I1215
Alternate gene names: NA
Gene position: 1267837-1266752 (Counterclockwise)
Preceding gene: 183220612
Following gene: 183220607
Centisome position: 35.22
GC content: 38.31
Gene sequence:
>1086_bases GTGATCCAAACTGAAAATTCACAACAATTTCTGCATGAATTAAATTTTCAATCTCAACAAGGATCCTCAGCAAATCCAAC TTATGATTCTACATCGATTTCTGTACCCGCAGCCTCTTTTAGGTGGTCAGGTTCTGTTCTTGCACCGAATGGAAAAATTT ATTCCATACCCTATCAAGCAACATCAGTTCTTATCATCGATCCAGTTACCAATTCGGCTGATATTACTTCTATTGTTGGT CTTACTGGATCTAATAAATGGAATGGTGGTGTATTGGCACCGAATGGCAAGATCTATGGTATGCCCTTTTCTAGTACGAG TGTGCTAATTATAGATCCAAAAACAAATACTGCTGATACAACTTCAATTACGGGCTTAGGAACTGGCAGTAAATGGAATG GTGGAGTATTAGCACCGAATGGGAAAATTTATGGGATTCCTTCGGAAAGCGATAGTGTTCTCATCATTGATCCAGTTACG AATACAGCTAATACGACAACAATTACTGGTTTAGGAGCGGGAGGGAATAAATGGTCATCTGGTGTATTGGCACCGAATGG AAAAATCTATGGGATACCTTATAATGTTACTGACAGTGTACTCATCATTGACCCGGTTACAAATACCGCCAACACTAATA CAATTACAGGACTTAGTGGGTCTTACCGTTGGTCATCTGGTGTATTAGCTCCCAATGGAAAAATATACGGAATCCCTAAT GATACAACAAATGTCCTTATCATTGATCCATTAAAAAATACTGCTGAGACAACGTCTATTGCGACTATCTCTGGTACCAC AAAATGGATTGGCGGAGTTTTAGCTCCCAATGGGAAAATTTATGGGATTCCAGCATCGAGTGATGTAGTCCTTATTATTG ATCCATCGAATAATTCGGTAGACACCACAACAATAACCGGATTAGTCGGAGTTAATAAATGGAATGGTGGAACTCTTGCA CCGAATGGAAAAATCTATGGAATTCCATTTTCTACGACAACAAATTCGGTTTTGATACTTGATCCAAAATCTAATGGTTC ATTTTGCCCTTCGATTTTAGAATCTTCATATTTGAATAAGTTTTAA
Upstream 100 bases:
>100_bases GTTTTTACAATCGTTAGTAGTTAAAACTATGAGAGGTGATATTTCTCCGCACTGTGGAATAAAAATCACAACTAATATTT GCGATCTAGATTTTCCTTCC
Downstream 100 bases:
>100_bases TTCAGATATTTAAAAAGTCTGAATTATTTGCTAAAAGAATTGTATGACTTTTTATAAAGAATGAATATATTATTACTGTA ACTTTGTCAGATGGTTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MIQTENSQQFLHELNFQSQQGSSANPTYDSTSISVPAASFRWSGSVLAPNGKIYSIPYQATSVLIIDPVTNSADITSIVG LTGSNKWNGGVLAPNGKIYGMPFSSTSVLIIDPKTNTADTTSITGLGTGSKWNGGVLAPNGKIYGIPSESDSVLIIDPVT NTANTTTITGLGAGGNKWSSGVLAPNGKIYGIPYNVTDSVLIIDPVTNTANTNTITGLSGSYRWSSGVLAPNGKIYGIPN DTTNVLIIDPLKNTAETTSIATISGTTKWIGGVLAPNGKIYGIPASSDVVLIIDPSNNSVDTTTITGLVGVNKWNGGTLA PNGKIYGIPFSTTTNSVLILDPKSNGSFCPSILESSYLNKF
Sequences:
>Translated_361_residues MIQTENSQQFLHELNFQSQQGSSANPTYDSTSISVPAASFRWSGSVLAPNGKIYSIPYQATSVLIIDPVTNSADITSIVG LTGSNKWNGGVLAPNGKIYGMPFSSTSVLIIDPKTNTADTTSITGLGTGSKWNGGVLAPNGKIYGIPSESDSVLIIDPVT NTANTTTITGLGAGGNKWSSGVLAPNGKIYGIPYNVTDSVLIIDPVTNTANTNTITGLSGSYRWSSGVLAPNGKIYGIPN DTTNVLIIDPLKNTAETTSIATISGTTKWIGGVLAPNGKIYGIPASSDVVLIIDPSNNSVDTTTITGLVGVNKWNGGTLA PNGKIYGIPFSTTTNSVLILDPKSNGSFCPSILESSYLNKF >Mature_361_residues MIQTENSQQFLHELNFQSQQGSSANPTYDSTSISVPAASFRWSGSVLAPNGKIYSIPYQATSVLIIDPVTNSADITSIVG LTGSNKWNGGVLAPNGKIYGMPFSSTSVLIIDPKTNTADTTSITGLGTGSKWNGGVLAPNGKIYGIPSESDSVLIIDPVT NTANTTTITGLGAGGNKWSSGVLAPNGKIYGIPYNVTDSVLIIDPVTNTANTNTITGLSGSYRWSSGVLAPNGKIYGIPN DTTNVLIIDPLKNTAETTSIATISGTTKWIGGVLAPNGKIYGIPASSDVVLIIDPSNNSVDTTTITGLVGVNKWNGGTLA PNGKIYGIPFSTTTNSVLILDPKSNGSFCPSILESSYLNKF
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37459; Mature: 37459
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQTENSQQFLHELNFQSQQGSSANPTYDSTSISVPAASFRWSGSVLAPNGKIYSIPYQA CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEECCCEECCCCEEEEECCCC TSVLIIDPVTNSADITSIVGLTGSNKWNGGVLAPNGKIYGMPFSSTSVLIIDPKTNTADT EEEEEEECCCCCCCEEEEEEECCCCCCCCCEECCCCEEEEECCCCCEEEEECCCCCCCCC TSITGLGTGSKWNGGVLAPNGKIYGIPSESDSVLIIDPVTNTANTTTITGLGAGGNKWSS EEEEECCCCCCCCCCEECCCCEEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCC GVLAPNGKIYGIPYNVTDSVLIIDPVTNTANTNTITGLSGSYRWSSGVLAPNGKIYGIPN CEECCCCEEEEEECCCCCCEEEEECCCCCCCCCEEECCCCCCEECCCEECCCCEEEECCC DTTNVLIIDPLKNTAETTSIATISGTTKWIGGVLAPNGKIYGIPASSDVVLIIDPSNNSV CCCCEEEECCCCCCCCCEEEEEECCCHHHHCEEECCCCEEEEECCCCCEEEEEECCCCCC DTTTITGLVGVNKWNGGTLAPNGKIYGIPFSTTTNSVLILDPKSNGSFCPSILESSYLNK CEEEEEEEEEEEECCCCEECCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHCC F C >Mature Secondary Structure MIQTENSQQFLHELNFQSQQGSSANPTYDSTSISVPAASFRWSGSVLAPNGKIYSIPYQA CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEECCCEECCCCEEEEECCCC TSVLIIDPVTNSADITSIVGLTGSNKWNGGVLAPNGKIYGMPFSSTSVLIIDPKTNTADT EEEEEEECCCCCCCEEEEEEECCCCCCCCCEECCCCEEEEECCCCCEEEEECCCCCCCCC TSITGLGTGSKWNGGVLAPNGKIYGIPSESDSVLIIDPVTNTANTTTITGLGAGGNKWSS EEEEECCCCCCCCCCEECCCCEEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCC GVLAPNGKIYGIPYNVTDSVLIIDPVTNTANTNTITGLSGSYRWSSGVLAPNGKIYGIPN CEECCCCEEEEEECCCCCCEEEEECCCCCCCCCEEECCCCCCEECCCEECCCCEEEECCC DTTNVLIIDPLKNTAETTSIATISGTTKWIGGVLAPNGKIYGIPASSDVVLIIDPSNNSV CCCCEEEECCCCCCCCCEEEEEECCCHHHHCEEECCCCEEEEECCCCCEEEEEECCCCCC DTTTITGLVGVNKWNGGTLAPNGKIYGIPFSTTTNSVLILDPKSNGSFCPSILESSYLNK CEEEEEEEEEEEECCCCEECCCCEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHCC F C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA