| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is cysT [H]
Identifier: 183220583
GI number: 183220583
Start: 1235136
End: 1235966
Strand: Reverse
Name: cysT [H]
Synonym: LEPBI_I1187
Alternate gene names: 183220583
Gene position: 1235966-1235136 (Counterclockwise)
Preceding gene: 183220584
Following gene: 183220582
Centisome position: 34.34
GC content: 41.16
Gene sequence:
>831_bases ATGATGCAAATTAAAACGCGGCCGTACAAAAAAATCCATTTTGGAATCAGTTTAGGATTAACTGTCTTTTATTCGTCCGC CATTGTCATCATACCACTTCTTGGACTTTTGATCCATTCTTTGGGAATTGGAATCTCTGGAATCCTGGAAGTGTTTACCG ATGAACGCATTCGATCTGCTTTGTATTTGAGTTTCACTGTAGGTTTTGTTTCTGCCCTACTGAACCTCTTCATTGGTTTT TTATTTGCTTGGGTCCTTGTTCGTTATCAGTTTCCGTTCAAAAAATTTTTTGATACACTCATAGATCTACCTTTCACTTT ACCCACAGCGGTTGCCGGGATTGCACTGACGACAATTTACTCCGAGACAGGTATCATTGGTTCCTTTTTTGCCGAGTGGG GGATTCAAATTGCTTATACACCAGTCGGCATTGTGATCGCACTGGTATTCATTGGGTTTCCCTTTGTGGTAAGAACAGTC CAACCTGTGATCGAAGAACTTCCGAAAGAATTGGAAGAAAGTGCTCGTTGCCTTGGTGCGACTCCCTTCCAAACATTTAC GAGAGTATTATTACCTGAACTTTGGCCGTCACTTCTTGCGGGAACGGGAATGGCGTTTGCACGTAGCATAGGGGAATATG GTTCAGTCGTTTTTATTTCAGGGAACCTTCCTGGCAAAACAGAAATTTTGCCCCTACTCATTGTCACCAAACTAGAACAG TACGAATATGAGAAGGCAACATCCATTGCGATTGTGATGTTACTCTCTTCGTTTTTCTTTATGTTTCTTATTAATTTATT ACAAGAACGGGCTTCGAAAAAACTCACATGA
Upstream 100 bases:
>100_bases ATTATTTTCTCTATCCGATTTAGGTGAAACTTGGGACTCTGCACAGAAAAAACATTTTGCAGATGGTGGATTATTTGATG CCATCTACAAAACCAAATAA
Downstream 100 bases:
>100_bases AATTGAAACTTGTTCCCTTCTTACTGATAATTATCGCATACACGTTGTTTGCTGTATTGTTAATTTTGCCGATTTATACA GTCTTTTCTGAGGCTTTTTC
Product: sulfate ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MMQIKTRPYKKIHFGISLGLTVFYSSAIVIIPLLGLLIHSLGIGISGILEVFTDERIRSALYLSFTVGFVSALLNLFIGF LFAWVLVRYQFPFKKFFDTLIDLPFTLPTAVAGIALTTIYSETGIIGSFFAEWGIQIAYTPVGIVIALVFIGFPFVVRTV QPVIEELPKELEESARCLGATPFQTFTRVLLPELWPSLLAGTGMAFARSIGEYGSVVFISGNLPGKTEILPLLIVTKLEQ YEYEKATSIAIVMLLSSFFFMFLINLLQERASKKLT
Sequences:
>Translated_276_residues MMQIKTRPYKKIHFGISLGLTVFYSSAIVIIPLLGLLIHSLGIGISGILEVFTDERIRSALYLSFTVGFVSALLNLFIGF LFAWVLVRYQFPFKKFFDTLIDLPFTLPTAVAGIALTTIYSETGIIGSFFAEWGIQIAYTPVGIVIALVFIGFPFVVRTV QPVIEELPKELEESARCLGATPFQTFTRVLLPELWPSLLAGTGMAFARSIGEYGSVVFISGNLPGKTEILPLLIVTKLEQ YEYEKATSIAIVMLLSSFFFMFLINLLQERASKKLT >Mature_276_residues MMQIKTRPYKKIHFGISLGLTVFYSSAIVIIPLLGLLIHSLGIGISGILEVFTDERIRSALYLSFTVGFVSALLNLFIGF LFAWVLVRYQFPFKKFFDTLIDLPFTLPTAVAGIALTTIYSETGIIGSFFAEWGIQIAYTPVGIVIALVFIGFPFVVRTV QPVIEELPKELEESARCLGATPFQTFTRVLLPELWPSLLAGTGMAFARSIGEYGSVVFISGNLPGKTEILPLLIVTKLEQ YEYEKATSIAIVMLLSSFFFMFLINLLQERASKKLT
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=226, Percent_Identity=45.575221238938, Blast_Score=210, Evalue=9e-56, Organism=Escherichia coli, GI87082099, Length=274, Percent_Identity=30.2919708029197, Blast_Score=147, Evalue=9e-37, Organism=Escherichia coli, GI1786980, Length=230, Percent_Identity=33.9130434782609, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1787369, Length=223, Percent_Identity=28.6995515695067, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786254, Length=229, Percent_Identity=25.764192139738, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787081, Length=226, Percent_Identity=26.9911504424779, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30676; Mature: 30676
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQIKTRPYKKIHFGISLGLTVFYSSAIVIIPLLGLLIHSLGIGISGILEVFTDERIRSA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LYLSFTVGFVSALLNLFIGFLFAWVLVRYQFPFKKFFDTLIDLPFTLPTAVAGIALTTIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH SETGIIGSFFAEWGIQIAYTPVGIVIALVFIGFPFVVRTVQPVIEELPKELEESARCLGA HHCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TPFQTFTRVLLPELWPSLLAGTGMAFARSIGEYGSVVFISGNLPGKTEILPLLIVTKLEQ CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH YEYEKATSIAIVMLLSSFFFMFLINLLQERASKKLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMQIKTRPYKKIHFGISLGLTVFYSSAIVIIPLLGLLIHSLGIGISGILEVFTDERIRSA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LYLSFTVGFVSALLNLFIGFLFAWVLVRYQFPFKKFFDTLIDLPFTLPTAVAGIALTTIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH SETGIIGSFFAEWGIQIAYTPVGIVIALVFIGFPFVVRTVQPVIEELPKELEESARCLGA HHCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TPFQTFTRVLLPELWPSLLAGTGMAFARSIGEYGSVVFISGNLPGKTEILPLLIVTKLEQ CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH YEYEKATSIAIVMLLSSFFFMFLINLLQERASKKLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]