| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is cysW [H]
Identifier: 183220582
GI number: 183220582
Start: 1234336
End: 1235139
Strand: Reverse
Name: cysW [H]
Synonym: LEPBI_I1186
Alternate gene names: 183220582
Gene position: 1235139-1234336 (Counterclockwise)
Preceding gene: 183220583
Following gene: 183220581
Centisome position: 34.31
GC content: 40.55
Gene sequence:
>804_bases ATGAAATTGAAACTTGTTCCCTTCTTACTGATAATTATCGCATACACGTTGTTTGCTGTATTGTTAATTTTGCCGATTTA TACAGTCTTTTCTGAGGCTTTTTCCGAAGGATTGGATAAGTATTGGTCCTCCATCACAAGTGAATATGCACTTTTTGCCA TTGGACTTACAGTCAAGGTTTCGGTTGTATCCGTGATCTTAAATACCTTATTTGGAATCACTGCGGCCTTCACCATCACT CGGTTTTCGTTTCCAGGGAAAAATTTACTCGTGACGATTATCGATTCTCCTTTCGCGGTATCTCCTGTGGTATCTGGACT CATCTTTTTGTTGTTATTCGGAAGGCAAGGTACCTTTGGTGACTTCCTATCAGAGCATCATATTAAAATTGTATTCAATA CTCCAGGACTCATCATTGCAACCGTGTTCATCACGTTTCCATTTGTGGCACGGGAACTCATCCCACTCATGCAAAGCCAG GGTCGTGAAGAAGAAGAAGCAGGATTGTTACTCGGAGCAAGTTTTGGACAATTATTATGGCGAATCATTTTGCCAAATCT CAAATGGGGTCTGTTATATGGGATCATCCTTTGTAATGCAAGAGCTATGGGGGAATTTGGAGCCGTTTCTGTCTTAAGTG GTCACATCCGTGGTAAAACCACAACCCTTCCCCTATACATCGAAATGTTATACAATGAATTTGATTCCGTTGGTGCGTTT GCTTGTGCCACCTTACTAGTGTTTTTATCACTTCTAACCCTCATCTTTAAATTGATTTTGGAAAAACGAACCGAGAGACC ATAA
Upstream 100 bases:
>100_bases ATGAGAAGGCAACATCCATTGCGATTGTGATGTTACTCTCTTCGTTTTTCTTTATGTTTCTTATTAATTTATTACAAGAA CGGGCTTCGAAAAAACTCAC
Downstream 100 bases:
>100_bases CATGCCTATTGAAATACAAAATGTACATAAAACTTTTGGATCGTTTACAGCCTTAAAAGATGTGAACCTTACCATCCCTG ATGGAGAACTTGTGGCCTTA
Product: sulfate ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKLKLVPFLLIIIAYTLFAVLLILPIYTVFSEAFSEGLDKYWSSITSEYALFAIGLTVKVSVVSVILNTLFGITAAFTIT RFSFPGKNLLVTIIDSPFAVSPVVSGLIFLLLFGRQGTFGDFLSEHHIKIVFNTPGLIIATVFITFPFVARELIPLMQSQ GREEEEAGLLLGASFGQLLWRIILPNLKWGLLYGIILCNARAMGEFGAVSVLSGHIRGKTTTLPLYIEMLYNEFDSVGAF ACATLLVFLSLLTLIFKLILEKRTERP
Sequences:
>Translated_267_residues MKLKLVPFLLIIIAYTLFAVLLILPIYTVFSEAFSEGLDKYWSSITSEYALFAIGLTVKVSVVSVILNTLFGITAAFTIT RFSFPGKNLLVTIIDSPFAVSPVVSGLIFLLLFGRQGTFGDFLSEHHIKIVFNTPGLIIATVFITFPFVARELIPLMQSQ GREEEEAGLLLGASFGQLLWRIILPNLKWGLLYGIILCNARAMGEFGAVSVLSGHIRGKTTTLPLYIEMLYNEFDSVGAF ACATLLVFLSLLTLIFKLILEKRTERP >Mature_267_residues MKLKLVPFLLIIIAYTLFAVLLILPIYTVFSEAFSEGLDKYWSSITSEYALFAIGLTVKVSVVSVILNTLFGITAAFTIT RFSFPGKNLLVTIIDSPFAVSPVVSGLIFLLLFGRQGTFGDFLSEHHIKIVFNTPGLIIATVFITFPFVARELIPLMQSQ GREEEEAGLLLGASFGQLLWRIILPNLKWGLLYGIILCNARAMGEFGAVSVLSGHIRGKTTTLPLYIEMLYNEFDSVGAF ACATLLVFLSLLTLIFKLILEKRTERP
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=259, Percent_Identity=48.2625482625483, Blast_Score=261, Evalue=2e-71, Organism=Escherichia coli, GI1788764, Length=207, Percent_Identity=36.231884057971, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1786980, Length=215, Percent_Identity=30.2325581395349, Blast_Score=81, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29555; Mature: 29555
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKLVPFLLIIIAYTLFAVLLILPIYTVFSEAFSEGLDKYWSSITSEYALFAIGLTVKV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVSVILNTLFGITAAFTITRFSFPGKNLLVTIIDSPFAVSPVVSGLIFLLLFGRQGTFG HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHH DFLSEHHIKIVFNTPGLIIATVFITFPFVARELIPLMQSQGREEEEAGLLLGASFGQLLW HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECHHHHHHH RIILPNLKWGLLYGIILCNARAMGEFGAVSVLSGHIRGKTTTLPLYIEMLYNEFDSVGAF HHHHCCCHHHHHHHHHHHCCHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ACATLLVFLSLLTLIFKLILEKRTERP HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKLKLVPFLLIIIAYTLFAVLLILPIYTVFSEAFSEGLDKYWSSITSEYALFAIGLTVKV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVSVILNTLFGITAAFTITRFSFPGKNLLVTIIDSPFAVSPVVSGLIFLLLFGRQGTFG HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHH DFLSEHHIKIVFNTPGLIIATVFITFPFVARELIPLMQSQGREEEEAGLLLGASFGQLLW HHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECHHHHHHH RIILPNLKWGLLYGIILCNARAMGEFGAVSVLSGHIRGKTTTLPLYIEMLYNEFDSVGAF HHHHCCCHHHHHHHHHHHCCHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ACATLLVFLSLLTLIFKLILEKRTERP HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]