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The map label for this gene is rsmI [H]

Identifier: 183220521

GI number: 183220521

Start: 1169966

End: 1170652

Strand: Reverse

Name: rsmI [H]

Synonym: LEPBI_I1122

Alternate gene names: 183220521

Gene position: 1170652-1169966 (Counterclockwise)

Preceding gene: 183220522

Following gene: 183220520

Centisome position: 32.52

GC content: 43.23

Gene sequence:

>687_bases
ATGAATCGATTGTATTTAGTATCCAATTCCATTGGGAATGATTTAGACCTTCCTCCGCGCACCAAACAATTATTAGAAGA
TGCCGATTGGATTTTGGGAGAAGAACAGAGAACCACATCTACCCTCTTAAAAAAACTTGGGATTTCGAAACCATTTGATC
TTTTGAATGAACACACTACCAAATCAGAGATGGATGAAATTGGGATGAAACTGGCGATGACAAAAAGGACATGCCTCATC
TCCGATTCCGGCAGTCCAGGATTAGAAGACCCAGGCAAATGGCTTGTTCCCTTGGCTTGGGATATGGGAGTGGAAGTACG
TTCCGCCCCAGGTCCAACGGCCTTGATTTCAGCCCTTACGAGTTCTGGTTTTGCGACTTCCCCGTTTTTATTCCTTGGAT
TTTTACCGAGAGAGGAAAAAGAAAGGGAAAGAACTTTAAAACAATACATTGGTCTTGGGATCACCATCGCGTTTTATGAA
ACCCCCTACCGGGCCAAACATTGTTTGGAAACTTTGGCAAAACTCCTACCCCATGACCGTCGGATTTTTTTAAGCCTTGG
GATCTCGTTCGCTCATGAAACTTCCTTCCGAGGTTCAGCCAAAGAAGTGCAAAAAAAATTCCCACAAGGAATGAAGTTAC
CTCCTGTATTTGTCATCGAAGAGAAAAAAGAAAGGCACAAACGATAG

Upstream 100 bases:

>100_bases
TTGGTGTGGCCATAAACAAAGGGGATACTGAATTCGTAAAGGCTTGTGTAAACAAAGGGATTCTCATCCAACCCTACTTT
ACCTACCAAACTCTCACAAA

Downstream 100 bases:

>100_bases
TTTCTTGACAGTACCTCTGTTATATTGGACGCTTGGCCAATGGTCAGTAAAGTAGAACAAAGTAGTGACGGATTAGATCC
ATTAATTTCAGAATCAGGCG

Product: putative uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNRLYLVSNSIGNDLDLPPRTKQLLEDADWILGEEQRTTSTLLKKLGISKPFDLLNEHTTKSEMDEIGMKLAMTKRTCLI
SDSGSPGLEDPGKWLVPLAWDMGVEVRSAPGPTALISALTSSGFATSPFLFLGFLPREEKERERTLKQYIGLGITIAFYE
TPYRAKHCLETLAKLLPHDRRIFLSLGISFAHETSFRGSAKEVQKKFPQGMKLPPVFVIEEKKERHKR

Sequences:

>Translated_228_residues
MNRLYLVSNSIGNDLDLPPRTKQLLEDADWILGEEQRTTSTLLKKLGISKPFDLLNEHTTKSEMDEIGMKLAMTKRTCLI
SDSGSPGLEDPGKWLVPLAWDMGVEVRSAPGPTALISALTSSGFATSPFLFLGFLPREEKERERTLKQYIGLGITIAFYE
TPYRAKHCLETLAKLLPHDRRIFLSLGISFAHETSFRGSAKEVQKKFPQGMKLPPVFVIEEKKERHKR
>Mature_228_residues
MNRLYLVSNSIGNDLDLPPRTKQLLEDADWILGEEQRTTSTLLKKLGISKPFDLLNEHTTKSEMDEIGMKLAMTKRTCLI
SDSGSPGLEDPGKWLVPLAWDMGVEVRSAPGPTALISALTSSGFATSPFLFLGFLPREEKERERTLKQYIGLGITIAFYE
TPYRAKHCLETLAKLLPHDRRIFLSLGISFAHETSFRGSAKEVQKKFPQGMKLPPVFVIEEKKERHKR

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=192, Percent_Identity=32.8125, Blast_Score=110, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 25731; Mature: 25731

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLYLVSNSIGNDLDLPPRTKQLLEDADWILGEEQRTTSTLLKKLGISKPFDLLNEHTT
CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCC
KSEMDEIGMKLAMTKRTCLISDSGSPGLEDPGKWLVPLAWDMGVEVRSAPGPTALISALT
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCHHHHHHHHH
SSGFATSPFLFLGFLPREEKERERTLKQYIGLGITIAFYETPYRAKHCLETLAKLLPHDR
CCCCCCCCHHHEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCC
RIFLSLGISFAHETSFRGSAKEVQKKFPQGMKLPPVFVIEEKKERHKR
EEEEEECCHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEECHHHHCCC
>Mature Secondary Structure
MNRLYLVSNSIGNDLDLPPRTKQLLEDADWILGEEQRTTSTLLKKLGISKPFDLLNEHTT
CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCC
KSEMDEIGMKLAMTKRTCLISDSGSPGLEDPGKWLVPLAWDMGVEVRSAPGPTALISALT
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCHHHHHHHHH
SSGFATSPFLFLGFLPREEKERERTLKQYIGLGITIAFYETPYRAKHCLETLAKLLPHDR
CCCCCCCCHHHEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCC
RIFLSLGISFAHETSFRGSAKEVQKKFPQGMKLPPVFVIEEKKERHKR
EEEEEECCHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA