| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220517
Identifier: 183220517
GI number: 183220517
Start: 1164780
End: 1166156
Strand: Reverse
Name: 183220517
Synonym: LEPBI_I1118
Alternate gene names: NA
Gene position: 1166156-1164780 (Counterclockwise)
Preceding gene: 183220519
Following gene: 183220515
Centisome position: 32.4
GC content: 40.38
Gene sequence:
>1377_bases ATGAATCGAAAAACATTCCTTAAAAATTTGACTGCTACTGCCGCTGGAGTGAGCCTCCTTTCCCCCAAAAAATTCTACGG ACAATCCACAGGAGTGGTCACTGCGGAAACGAAACCACGACCATCTGGACCCAAAAAAGCGATAGTGCTCGGTGGTGGTC TATCTGGTCTTTATTCTGCTTATTTACTCAAACAAACAGGTTATGACGTCACTGTGATTGAAAGAGGAGATCGTTTCGGA GGCAGGATCAGCACCTATTCCAATGCCGAATCGGGAATCGTACAAGACTTAGGTGGCGAATGGATCGGTGAAAACCAAAC CGATATCAAAAGCCTTGTCAAACAACTTGGATTGGAACTCGTAAGTGCCAACATATCAGAGCGATTCCTTCTTTCCAAAA CCAATTCTGACTCTCATAAAATTTCTAGCACCTCGATTGATACTTTAGATAAGGTGATCGACTTACACAAGTCACTTGGG ACTTCACAAAAACAAGGATTAGACAAAATCAATTTTTCCTCTTATGCAAGATACCAAGGTTTATCCGAAGAAGAAATCCG ATCCATGAACGAACTCTATCGGATCATTTTGGGAGCCGACTTAAACCAAATTTCCAGTGAATCTGTTCTCGATGATTTAT CAGCATTACAATCTGCGCTCAAACCGAAATACTTAGTGAAAGGCGGTGCTGAACAAATCATACAATCGCTTGTCGCACAA TTAAAAGGACAGGAATTATTATTGGGAGAAATGGCAACTAAGGTTTCCCAACAAAAAAACCAAGTGAGTGTCGAGTTATC TTCAGGAAGGACCATCAAAGGGAATTTGGTAATTTGTACCCTCCCTTCTGCGGCTGTACTTGATATCAAATGGACACCAA CATTGCCAAAAGATTTAATTTATTCCGCACTCAGAATGCAAACGGGTAAAATTTCGAAAAACATCTGTTTTGTGAAATCA AATACAGGTTTATCAAATTTTTTCCAAAACACCAATACAGCAGCTGAAACTTTTTATGTTTCAGATCTTGCCATTGGCGC AAACATTACAGCTGTCACATCCATAACAACAGGTGATAAAGCATCTCTGTTTGAGAAAGGGAGTGATCGCCAGAAAAAAA TATTAATGGAATCCGCGCTCGAAGAGTTGGGTAATTTTGAAATCATAGCAGAAAAACCATTTCATTTTCATAGTTTTCAA AAAACGACAGGTAGGTCCGGGTTTGTATCCTTATTTCCACCTGGAAGTTACGGAATCAAAGATGTTTGGAATGAACCATT CGAAAGGGTATTTTTTGCAGGAGAACACCTCGCCTTACACACAGGAAGTATGGATTCAGCGGTTGCGTCGTCGATCCAAG CGATTAGTAAAACCTAA
Upstream 100 bases:
>100_bases GAATTTAGAATTTCGCATAAAAAAGCCAAAGCCAATAGAATCGATTTTTGTAATTTTTCTAGCCTTTTTTGTTTTGGATG TTAAAATAGGGGAAAGTTCT
Downstream 100 bases:
>100_bases TGAATTTTTAATCCGAACAAAAAGCGTAATGGTTTGCTCCTTCGGATCAAAAATTCATACATTAAAAAACTGAAACATAA CACAACTACATTGTGAAAGA
Product: putative amine oxidase
Products: 2-oxo acid; NH3; H2O2
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MNRKTFLKNLTATAAGVSLLSPKKFYGQSTGVVTAETKPRPSGPKKAIVLGGGLSGLYSAYLLKQTGYDVTVIERGDRFG GRISTYSNAESGIVQDLGGEWIGENQTDIKSLVKQLGLELVSANISERFLLSKTNSDSHKISSTSIDTLDKVIDLHKSLG TSQKQGLDKINFSSYARYQGLSEEEIRSMNELYRIILGADLNQISSESVLDDLSALQSALKPKYLVKGGAEQIIQSLVAQ LKGQELLLGEMATKVSQQKNQVSVELSSGRTIKGNLVICTLPSAAVLDIKWTPTLPKDLIYSALRMQTGKISKNICFVKS NTGLSNFFQNTNTAAETFYVSDLAIGANITAVTSITTGDKASLFEKGSDRQKKILMESALEELGNFEIIAEKPFHFHSFQ KTTGRSGFVSLFPPGSYGIKDVWNEPFERVFFAGEHLALHTGSMDSAVASSIQAISKT
Sequences:
>Translated_458_residues MNRKTFLKNLTATAAGVSLLSPKKFYGQSTGVVTAETKPRPSGPKKAIVLGGGLSGLYSAYLLKQTGYDVTVIERGDRFG GRISTYSNAESGIVQDLGGEWIGENQTDIKSLVKQLGLELVSANISERFLLSKTNSDSHKISSTSIDTLDKVIDLHKSLG TSQKQGLDKINFSSYARYQGLSEEEIRSMNELYRIILGADLNQISSESVLDDLSALQSALKPKYLVKGGAEQIIQSLVAQ LKGQELLLGEMATKVSQQKNQVSVELSSGRTIKGNLVICTLPSAAVLDIKWTPTLPKDLIYSALRMQTGKISKNICFVKS NTGLSNFFQNTNTAAETFYVSDLAIGANITAVTSITTGDKASLFEKGSDRQKKILMESALEELGNFEIIAEKPFHFHSFQ KTTGRSGFVSLFPPGSYGIKDVWNEPFERVFFAGEHLALHTGSMDSAVASSIQAISKT >Mature_458_residues MNRKTFLKNLTATAAGVSLLSPKKFYGQSTGVVTAETKPRPSGPKKAIVLGGGLSGLYSAYLLKQTGYDVTVIERGDRFG GRISTYSNAESGIVQDLGGEWIGENQTDIKSLVKQLGLELVSANISERFLLSKTNSDSHKISSTSIDTLDKVIDLHKSLG TSQKQGLDKINFSSYARYQGLSEEEIRSMNELYRIILGADLNQISSESVLDDLSALQSALKPKYLVKGGAEQIIQSLVAQ LKGQELLLGEMATKVSQQKNQVSVELSSGRTIKGNLVICTLPSAAVLDIKWTPTLPKDLIYSALRMQTGKISKNICFVKS NTGLSNFFQNTNTAAETFYVSDLAIGANITAVTSITTGDKASLFEKGSDRQKKILMESALEELGNFEIIAEKPFHFHSFQ KTTGRSGFVSLFPPGSYGIKDVWNEPFERVFFAGEHLALHTGSMDSAVASSIQAISKT
Specific function: Unknown
COG id: COG1231
COG function: function code E; Monoamine oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin monoamine oxidase family [H]
Homologues:
Organism=Homo sapiens, GI4557735, Length=447, Percent_Identity=24.8322147651007, Blast_Score=93, Evalue=6e-19, Organism=Homo sapiens, GI38202207, Length=439, Percent_Identity=24.6013667425968, Blast_Score=88, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001613 - InterPro: IPR002937 [H]
Pfam domain/function: PF01593 Amino_oxidase [H]
EC number: 1.4.3.2
Molecular weight: Translated: 49681; Mature: 49681
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKTFLKNLTATAAGVSLLSPKKFYGQSTGVVTAETKPRPSGPKKAIVLGGGLSGLYSA CCCHHHHHHHHHHHHCHHHCCCHHHCCCCCCEEEECCCCCCCCCCEEEEEECCHHHHHHH YLLKQTGYDVTVIERGDRFGGRISTYSNAESGIVQDLGGEWIGENQTDIKSLVKQLGLEL HHHHHCCCEEEEEECCCCCCCEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHH VSANISERFLLSKTNSDSHKISSTSIDTLDKVIDLHKSLGTSQKQGLDKINFSSYARYQG HHCCCCHHEEEECCCCCCCEECCCHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHCC LSEEEIRSMNELYRIILGADLNQISSESVLDDLSALQSALKPKYLVKGGAEQIIQSLVAQ CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH LKGQELLLGEMATKVSQQKNQVSVELSSGRTIKGNLVICTLPSAAVLDIKWTPTLPKDLI HCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCEEEEECCCCEEEEEEECCCCCHHHH YSALRMQTGKISKNICFVKSNTGLSNFFQNTNTAAETFYVSDLAIGANITAVTSITTGDK HHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCHHHEEEEEHEEECCCEEEEEEECCCCH ASLFEKGSDRQKKILMESALEELGNFEIIAEKPFHFHSFQKTTGRSGFVSLFPPGSYGIK HHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCCEEEECCCCCCCHH DVWNEPFERVFFAGEHLALHTGSMDSAVASSIQAISKT HHHCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNRKTFLKNLTATAAGVSLLSPKKFYGQSTGVVTAETKPRPSGPKKAIVLGGGLSGLYSA CCCHHHHHHHHHHHHCHHHCCCHHHCCCCCCEEEECCCCCCCCCCEEEEEECCHHHHHHH YLLKQTGYDVTVIERGDRFGGRISTYSNAESGIVQDLGGEWIGENQTDIKSLVKQLGLEL HHHHHCCCEEEEEECCCCCCCEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHH VSANISERFLLSKTNSDSHKISSTSIDTLDKVIDLHKSLGTSQKQGLDKINFSSYARYQG HHCCCCHHEEEECCCCCCCEECCCHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHCC LSEEEIRSMNELYRIILGADLNQISSESVLDDLSALQSALKPKYLVKGGAEQIIQSLVAQ CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH LKGQELLLGEMATKVSQQKNQVSVELSSGRTIKGNLVICTLPSAAVLDIKWTPTLPKDLI HCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCEEEEECCCCEEEEEEECCCCCHHHH YSALRMQTGKISKNICFVKSNTGLSNFFQNTNTAAETFYVSDLAIGANITAVTSITTGDK HHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCHHHEEEEEHEEECCCEEEEEEECCCCH ASLFEKGSDRQKKILMESALEELGNFEIIAEKPFHFHSFQKTTGRSGFVSLFPPGSYGIK HHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHCCCCCCEEEECCCCCCCHH DVWNEPFERVFFAGEHLALHTGSMDSAVASSIQAISKT HHHCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-amino acid; H2O; O2
Specific reaction: an L-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]