| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is rsbP [H]
Identifier: 183220445
GI number: 183220445
Start: 1082144
End: 1084069
Strand: Reverse
Name: rsbP [H]
Synonym: LEPBI_I1042
Alternate gene names: 183220445
Gene position: 1084069-1082144 (Counterclockwise)
Preceding gene: 183220446
Following gene: 183220444
Centisome position: 30.12
GC content: 37.38
Gene sequence:
>1926_bases TTGAAACCGATTTTATCCAAATTCACTCTCCTCTTCACACTCTACAGTCTTTTAGTGATACCCATTTTCGCCGATGCAAA CGAAGATATGGGAGAGAGATTGGTATTCACAAAAGAATTCACATATTGGATTGATACGAAGTCAAATACACCCGTAGATT CAGTTTTAACGACTGGAAAATTCCAAGCGATTGATGATGAATTTGCCAATTTTGGTTTTTTAAAAGGAACCTTGTGGTTA CGCCTCGATCCCAATCAATTTCCAGACCCAACCAAATTCCCACTTCTACTCGTACAAGCGCATAATATTGATTTGGTGGA ACTTTACCACAAACATGAAGGTGATAGTTTCATCGTTTCTAAATCAGGTCATATCCAACCAATGTTCCAAAGGGAAATCC CACATAGGAATTTTGTTTTTCGCCTAGGACATCAAAAGGAAACCATCCTCATTGCCATCAAATCCGATATATCCTTACAA TTTTCACTTGTATTCACAAACCAAAGGAACCTACAAAGAGAAGATTATGTAACGCAGTGGGTATATGGTTTATTTTTTGG AAGTTTAGGGATCATCATTTTATACAATCTTGCGATCGCATTTTTTGTAAGGGATAAAAGTTATTTTTATTATATCGGAT ATGTTTTGTTTTTTGGTCTCGGCCAGTTATCTTTACTCGGTTTTTTTGGGTATTTTTTTGTTCCTAATTCCTATTATTGG AAACGAGTGGGAATTCCCGTTTTTTTCAGTCTCTGCCTCTTTTTCTTTGTTTTGTTCACTGCCAATTTTTTAAAGATCAA AGCAAGGTTACCTAGAACTACTAGGTTCTATTTTTTGTTAGGTGCATTTTCCTTATTCAATGTTTGTATCGCGTTATTTG GAGGGGTTGCTGAAGCTTCCATCGGTGTGAGTTGGCTTTCTGTGAGTATTTGTCTTACCTTATTTGGAATTTTGATATGG GGATTAAAAAAACGGATTCGTTCTTTTTATTATATCTCCATCGCATTTTTTTTATTACTCCTCACATGTGTGATCTATGG AATGTTGAAGTTTGGAATTTTGCCTAGTAATTCTTTTCTAGAAGAGATGTTATTTCCGATTGCTTCACTTGCAGATATCA CTCTCTTCGCTTTTGCTTTGGCAGATCGAATCCAATTGTTACGGCAGGAAAAAGATCTGGCCCTTGCCCAAGTCACAAGC CTTAGAAGGGAAAGAAAAATTTCACGTGACATTCTCATGCAATCTCTTCCGAAAACAAGTCCCAATGTCAAAAACCTCCA AATCCAAATTTATATCCAACCAATGAAGGATGTAGGAGGAGATTTTTATGAATACCATTCACCGAATCCCTATGAACTAG GGATTGTATTGTGTGATGTATCGGGGCACGGAATCCCAGCATCTCTTATCTCTGCTATGGGAAAAGTTGCTTTCACAACA CAAAAGGATTCGATTTCTTCCCCCAAACAGGTATTAGAGGGTATGAACCGAGTTTTGTTTGGGAACTGTTCTCCTCAATA TGTGACTGCCTCTTATTTGTACTTGAATAGTTCTACCAAGATTTGGAGATTTGGGAGAGCAGGCCATCCAAGTGCTTTTT TACAAAGGTCGAGTGGTGAAATCATCAAAGTCCACCCGAAGGGAAAAATCATTGGAGTGTTTCCGGAAATCCAAATCGAT GAAACCACTTATCCCGTTTTACCAAAAGATCGTATTTTATTATTGAGTGATGGAGTTTTGGAATGTTTTGATCCGAAGGG AAATATGTTCGGTGATACAGGACTCATTGAATTTTTAAAAACCAACCGGGAACTTCCCAATCATTTATTCAAAGGAAAAC TCATCCAAACTTTGGAGTCCTTTTCAAATCGAGAAATAAAAGACTGGGAGGACGACCTAACCTTTATTTTTCTGGAATTG GTATGA
Upstream 100 bases:
>100_bases TTACACCGGTCCAAAAGAAATTTCTTACGAAACGGCAAAAAAACAGGCCTAAGTCAATACGACACAGGACAAGGGAATCT CCCTTGTCCCTTCCCAACAC
Downstream 100 bases:
>100_bases CAAAAAGTTACGAATTATTGGATTCTGGGGACCTTTCCAAATTAGAAATTGTGGGCGGATACAAACTCCAAAGGTCCTCC CCTACTTCCGCCTATGGCAA
Product: putative phosphoserine phosphatase RsbP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 641; Mature: 641
Protein sequence:
>641_residues MKPILSKFTLLFTLYSLLVIPIFADANEDMGERLVFTKEFTYWIDTKSNTPVDSVLTTGKFQAIDDEFANFGFLKGTLWL RLDPNQFPDPTKFPLLLVQAHNIDLVELYHKHEGDSFIVSKSGHIQPMFQREIPHRNFVFRLGHQKETILIAIKSDISLQ FSLVFTNQRNLQREDYVTQWVYGLFFGSLGIIILYNLAIAFFVRDKSYFYYIGYVLFFGLGQLSLLGFFGYFFVPNSYYW KRVGIPVFFSLCLFFFVLFTANFLKIKARLPRTTRFYFLLGAFSLFNVCIALFGGVAEASIGVSWLSVSICLTLFGILIW GLKKRIRSFYYISIAFFLLLLTCVIYGMLKFGILPSNSFLEEMLFPIASLADITLFAFALADRIQLLRQEKDLALAQVTS LRRERKISRDILMQSLPKTSPNVKNLQIQIYIQPMKDVGGDFYEYHSPNPYELGIVLCDVSGHGIPASLISAMGKVAFTT QKDSISSPKQVLEGMNRVLFGNCSPQYVTASYLYLNSSTKIWRFGRAGHPSAFLQRSSGEIIKVHPKGKIIGVFPEIQID ETTYPVLPKDRILLLSDGVLECFDPKGNMFGDTGLIEFLKTNRELPNHLFKGKLIQTLESFSNREIKDWEDDLTFIFLEL V
Sequences:
>Translated_641_residues MKPILSKFTLLFTLYSLLVIPIFADANEDMGERLVFTKEFTYWIDTKSNTPVDSVLTTGKFQAIDDEFANFGFLKGTLWL RLDPNQFPDPTKFPLLLVQAHNIDLVELYHKHEGDSFIVSKSGHIQPMFQREIPHRNFVFRLGHQKETILIAIKSDISLQ FSLVFTNQRNLQREDYVTQWVYGLFFGSLGIIILYNLAIAFFVRDKSYFYYIGYVLFFGLGQLSLLGFFGYFFVPNSYYW KRVGIPVFFSLCLFFFVLFTANFLKIKARLPRTTRFYFLLGAFSLFNVCIALFGGVAEASIGVSWLSVSICLTLFGILIW GLKKRIRSFYYISIAFFLLLLTCVIYGMLKFGILPSNSFLEEMLFPIASLADITLFAFALADRIQLLRQEKDLALAQVTS LRRERKISRDILMQSLPKTSPNVKNLQIQIYIQPMKDVGGDFYEYHSPNPYELGIVLCDVSGHGIPASLISAMGKVAFTT QKDSISSPKQVLEGMNRVLFGNCSPQYVTASYLYLNSSTKIWRFGRAGHPSAFLQRSSGEIIKVHPKGKIIGVFPEIQID ETTYPVLPKDRILLLSDGVLECFDPKGNMFGDTGLIEFLKTNRELPNHLFKGKLIQTLESFSNREIKDWEDDLTFIFLEL V >Mature_641_residues MKPILSKFTLLFTLYSLLVIPIFADANEDMGERLVFTKEFTYWIDTKSNTPVDSVLTTGKFQAIDDEFANFGFLKGTLWL RLDPNQFPDPTKFPLLLVQAHNIDLVELYHKHEGDSFIVSKSGHIQPMFQREIPHRNFVFRLGHQKETILIAIKSDISLQ FSLVFTNQRNLQREDYVTQWVYGLFFGSLGIIILYNLAIAFFVRDKSYFYYIGYVLFFGLGQLSLLGFFGYFFVPNSYYW KRVGIPVFFSLCLFFFVLFTANFLKIKARLPRTTRFYFLLGAFSLFNVCIALFGGVAEASIGVSWLSVSICLTLFGILIW GLKKRIRSFYYISIAFFLLLLTCVIYGMLKFGILPSNSFLEEMLFPIASLADITLFAFALADRIQLLRQEKDLALAQVTS LRRERKISRDILMQSLPKTSPNVKNLQIQIYIQPMKDVGGDFYEYHSPNPYELGIVLCDVSGHGIPASLISAMGKVAFTT QKDSISSPKQVLEGMNRVLFGNCSPQYVTASYLYLNSSTKIWRFGRAGHPSAFLQRSSGEIIKVHPKGKIIGVFPEIQID ETTYPVLPKDRILLLSDGVLECFDPKGNMFGDTGLIEFLKTNRELPNHLFKGKLIQTLESFSNREIKDWEDDLTFIFLEL V
Specific function: Positive regulator of sigma-B activity. Dephosphorylates rsbV in response to energy stress [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00989 PAS; PF07228 SpoIIE [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 73364; Mature: 73364
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPILSKFTLLFTLYSLLVIPIFADANEDMGERLVFTKEFTYWIDTKSNTPVDSVLTTGK CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHCCCC FQAIDDEFANFGFLKGTLWLRLDPNQFPDPTKFPLLLVQAHNIDLVELYHKHEGDSFIVS CEECCHHHHCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEHHHHCCCCEEEEE KSGHIQPMFQREIPHRNFVFRLGHQKETILIAIKSDISLQFSLVFTNQRNLQREDYVTQW CCCCCCCHHHHCCCCCCEEEEECCCCCEEEEEEECCCEEEEEEEEECCCCCCHHHHHHHH VYGLFFGSLGIIILYNLAIAFFVRDKSYFYYIGYVLFFGLGQLSLLGFFGYFFVPNSYYW HHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE KRVGIPVFFSLCLFFFVLFTANFLKIKARLPRTTRFYFLLGAFSLFNVCIALFGGVAEAS ECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH IGVSWLSVSICLTLFGILIWGLKKRIRSFYYISIAFFLLLLTCVIYGMLKFGILPSNSFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EEMLFPIASLADITLFAFALADRIQLLRQEKDLALAQVTSLRRERKISRDILMQSLPKTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PNVKNLQIQIYIQPMKDVGGDFYEYHSPNPYELGIVLCDVSGHGIPASLISAMGKVAFTT CCCCEEEEEEEEEEHHHCCCCCEECCCCCCEEEEEEEEECCCCCCCHHHHHHHCCEEEEE QKDSISSPKQVLEGMNRVLFGNCSPQYVTASYLYLNSSTKIWRFGRAGHPSAFLQRSSGE CCCCCCCHHHHHHHCCCEEECCCCCCEEEEEEEEEECCCCEEECCCCCCCHHHHCCCCCC IIKVHPKGKIIGVFPEIQIDETTYPVLPKDRILLLSDGVLECFDPKGNMFGDTGLIEFLK EEEECCCCCEEEECCCEEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHH TNRELPNHLFKGKLIQTLESFSNREIKDWEDDLTFIFLELV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MKPILSKFTLLFTLYSLLVIPIFADANEDMGERLVFTKEFTYWIDTKSNTPVDSVLTTGK CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHCCCC FQAIDDEFANFGFLKGTLWLRLDPNQFPDPTKFPLLLVQAHNIDLVELYHKHEGDSFIVS CEECCHHHHCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEHHHHCCCCEEEEE KSGHIQPMFQREIPHRNFVFRLGHQKETILIAIKSDISLQFSLVFTNQRNLQREDYVTQW CCCCCCCHHHHCCCCCCEEEEECCCCCEEEEEEECCCEEEEEEEEECCCCCCHHHHHHHH VYGLFFGSLGIIILYNLAIAFFVRDKSYFYYIGYVLFFGLGQLSLLGFFGYFFVPNSYYW HHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE KRVGIPVFFSLCLFFFVLFTANFLKIKARLPRTTRFYFLLGAFSLFNVCIALFGGVAEAS ECCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH IGVSWLSVSICLTLFGILIWGLKKRIRSFYYISIAFFLLLLTCVIYGMLKFGILPSNSFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EEMLFPIASLADITLFAFALADRIQLLRQEKDLALAQVTSLRRERKISRDILMQSLPKTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PNVKNLQIQIYIQPMKDVGGDFYEYHSPNPYELGIVLCDVSGHGIPASLISAMGKVAFTT CCCCEEEEEEEEEEHHHCCCCCEECCCCCCEEEEEEEEECCCCCCCHHHHHHHCCEEEEE QKDSISSPKQVLEGMNRVLFGNCSPQYVTASYLYLNSSTKIWRFGRAGHPSAFLQRSSGE CCCCCCCHHHHHHHCCCEEECCCCCCEEEEEEEEEECCCCEEECCCCCCCHHHHCCCCCC IIKVHPKGKIIGVFPEIQIDETTYPVLPKDRILLLSDGVLECFDPKGNMFGDTGLIEFLK EEEECCCCCEEEECCCEEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHH TNRELPNHLFKGKLIQTLESFSNREIKDWEDDLTFIFLELV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 10632888 [H]