| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220079
Identifier: 183220079
GI number: 183220079
Start: 670631
End: 671413
Strand: Direct
Name: 183220079
Synonym: LEPBI_I0666
Alternate gene names: NA
Gene position: 670631-671413 (Clockwise)
Preceding gene: 183220074
Following gene: 183220091
Centisome position: 18.63
GC content: 41.76
Gene sequence:
>783_bases ATGCGTTCCATCGGCCTTATCCTTTGCCTTTTGTATTTTTTGAATTGTGCCACCTATTGGAAAAATCGTAAAAATGATTT GAAAGATATTGTTACGGTGGGTGCCGAAACTCCTATGTATGGAGCGGCTGTTAAAGTAGGACCCCTTCCCATTGGATTTG TTTTCCAGGGTGGTGAGTCGAGTTTGGGGAAACGTGATTTAGGTCGTGGGGTTGGAATCCGCGGTGGCGAGATTGGAGGT TATCATTCTCAACAGCTCGTCTTTGGTATCTTAGGTGGGGAAAGTTTTCATTCTGGTTCTCCTGTGCTTGATGCCAAAGG AAATTGGCTTGTGGACAAAAAAGGAATTCCACTTACAAACGATGAAAGGGCCAATCTCAAAAGTTATAAGATGCGATATT ATTCGTACTTCTATGATCCTGTGAAAGATCGAAAGGCTCGTAAAAAAGAGTATTTTCGAAGGGAACTTACAAAAGACATC GTGGCAAACACCGGCCAAAAAGAATTTTTGATCTACCTTCCTAAAGAAGATTTAAAACCATTTGGTTACCCTCCAGGTTA TTCCTGGAATGTAGAAGTTGTCGGAGGAGTGTATGGTGGTGCGAGAGTTGGTTTTAATATTGCAGAAGCGTTTGATTTTT TATTGGGTTTTACCACCATCGATTTGTTAGATGATGATATAGAGGGAAAGGAAAAACCAAGTTTCCCTGGTTTTCCGTTC CCGGCACCTACGGATGTAGAATCTGAATCAGAAACGGACTCAACATCAGAAATTGCCCCTTGA
Upstream 100 bases:
>100_bases TCACTTCGATCATGGGAAAATCTTCAAAAGAAGCCATATCTTCCCAAAAAGTTTGTTTTTTTGATTCCGAAAAGTAGAAA ATGAAAAAAATTGGAAAAGA
Downstream 100 bases:
>100_bases TTTTATAGTTTAAAATCTTTTGCTGTGATTTTGTTTTTAGGATCAAATGTGAGTTTTAAAAACTTTTCTACAACATCTGG TTTTTCTTTGAGAGTGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRSIGLILCLLYFLNCATYWKNRKNDLKDIVTVGAETPMYGAAVKVGPLPIGFVFQGGESSLGKRDLGRGVGIRGGEIGG YHSQQLVFGILGGESFHSGSPVLDAKGNWLVDKKGIPLTNDERANLKSYKMRYYSYFYDPVKDRKARKKEYFRRELTKDI VANTGQKEFLIYLPKEDLKPFGYPPGYSWNVEVVGGVYGGARVGFNIAEAFDFLLGFTTIDLLDDDIEGKEKPSFPGFPF PAPTDVESESETDSTSEIAP
Sequences:
>Translated_260_residues MRSIGLILCLLYFLNCATYWKNRKNDLKDIVTVGAETPMYGAAVKVGPLPIGFVFQGGESSLGKRDLGRGVGIRGGEIGG YHSQQLVFGILGGESFHSGSPVLDAKGNWLVDKKGIPLTNDERANLKSYKMRYYSYFYDPVKDRKARKKEYFRRELTKDI VANTGQKEFLIYLPKEDLKPFGYPPGYSWNVEVVGGVYGGARVGFNIAEAFDFLLGFTTIDLLDDDIEGKEKPSFPGFPF PAPTDVESESETDSTSEIAP >Mature_260_residues MRSIGLILCLLYFLNCATYWKNRKNDLKDIVTVGAETPMYGAAVKVGPLPIGFVFQGGESSLGKRDLGRGVGIRGGEIGG YHSQQLVFGILGGESFHSGSPVLDAKGNWLVDKKGIPLTNDERANLKSYKMRYYSYFYDPVKDRKARKKEYFRRELTKDI VANTGQKEFLIYLPKEDLKPFGYPPGYSWNVEVVGGVYGGARVGFNIAEAFDFLLGFTTIDLLDDDIEGKEKPSFPGFPF PAPTDVESESETDSTSEIAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28813; Mature: 28813
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSIGLILCLLYFLNCATYWKNRKNDLKDIVTVGAETPMYGAAVKVGPLPIGFVFQGGES CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCC SLGKRDLGRGVGIRGGEIGGYHSQQLVFGILGGESFHSGSPVLDAKGNWLVDKKGIPLTN CCCHHHHCCCCCCCCCCCCCEECCEEEEEEECCCCCCCCCCEEECCCCEEEECCCCCCCC DERANLKSYKMRYYSYFYDPVKDRKARKKEYFRRELTKDIVANTGQKEFLIYLPKEDLKP CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCC FGYPPGYSWNVEVVGGVYGGARVGFNIAEAFDFLLGFTTIDLLDDDIEGKEKPSFPGFPF CCCCCCCCEEEEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PAPTDVESESETDSTSEIAP CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRSIGLILCLLYFLNCATYWKNRKNDLKDIVTVGAETPMYGAAVKVGPLPIGFVFQGGES CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCC SLGKRDLGRGVGIRGGEIGGYHSQQLVFGILGGESFHSGSPVLDAKGNWLVDKKGIPLTN CCCHHHHCCCCCCCCCCCCCEECCEEEEEEECCCCCCCCCCEEECCCCEEEECCCCCCCC DERANLKSYKMRYYSYFYDPVKDRKARKKEYFRRELTKDIVANTGQKEFLIYLPKEDLKP CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCC FGYPPGYSWNVEVVGGVYGGARVGFNIAEAFDFLLGFTTIDLLDDDIEGKEKPSFPGFPF CCCCCCCCEEEEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PAPTDVESESETDSTSEIAP CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA