| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220049
Identifier: 183220049
GI number: 183220049
Start: 640933
End: 641748
Strand: Direct
Name: 183220049
Synonym: LEPBI_I0636
Alternate gene names: NA
Gene position: 640933-641748 (Clockwise)
Preceding gene: 183220048
Following gene: 183220050
Centisome position: 17.81
GC content: 38.48
Gene sequence:
>816_bases TTGTTTGGACAAGAAAGTCCAAACAATGTGCAAATTGTACGGACAAAAACTCCTGAGATCGTATCATTGGAAGAGATCTT AAAAGAAGTGAGTCAACATGATGTACTTGTGTTAGGCGAGGAACATGACAATACTGTCTTACATCGATTTTATGAAGATT TGGTTCGGCAACTTCAAACACGGCAAACATTCAGTATATCTTTGGAAATGTTGGAAAAAGACCAACAATTTGTCGTTGAT GAATACTTAAACGGAACCATTTCCGAATCACAATTTTTGTCGTCCATTGTCCATTGGAAAAATTTCAAAACAGATTATTT GCCAATTGTGAATCTTTCAAAAGAAAAAAAATCTAGAGTCATTGCTGCCAATCCTCCCAGAAGGTATGTGAACCTTATCT CCAAAAAAGGACTTTCTGCGTATAAAGATTTATCGAAAGAAGCGCAAAGTTTACTACCACAAGCATACACACTTGAAAAA TACCTAACCAAAGAATACAAACAAAGGTTAACCGAACTTTTTGGAGGGACAGAACATAACTCTGCTCACCAAATCAATAT TGAGTTTATGGCCCTCGGGCAAGCCACCTGGGACCAAGGAATGGCAGAAGCAATTTCTTCCGAAATTTACAAAACGGGTC AAAAAGTAGTGCATTTGAACGGACGGTTTCATTCGGATCGAAATGGGGGAGTGGTGACTAGGTTACGGGAAATGGGCCAT TCGGTCCTTGTTCTCTCTGGATTTCAAAAAGGAAGGGAATCGGCCGAAGATTTTGTGAAAATCGCTGATTTTGTAATTTT AACAAATGACCGATAA
Upstream 100 bases:
>100_bases TCTTCTACCAAACCAGAAAGTGTCGAACTCAAACAAGCCATTGAAAGCATCTTATAAGAGAATTCTTTTCTTTTTAGTTG TAACATTTTCTGTTTACGGA
Downstream 100 bases:
>100_bases GAGTAGGGAGAACCTATGTCGGCACCGTCTCTTAAATACCTTTGTCCTCACTGCCAGAAAGCATCTCGTTTGCCAGAACC AACTCCGAAAGAAGGAAAAT
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MFGQESPNNVQIVRTKTPEIVSLEEILKEVSQHDVLVLGEEHDNTVLHRFYEDLVRQLQTRQTFSISLEMLEKDQQFVVD EYLNGTISESQFLSSIVHWKNFKTDYLPIVNLSKEKKSRVIAANPPRRYVNLISKKGLSAYKDLSKEAQSLLPQAYTLEK YLTKEYKQRLTELFGGTEHNSAHQINIEFMALGQATWDQGMAEAISSEIYKTGQKVVHLNGRFHSDRNGGVVTRLREMGH SVLVLSGFQKGRESAEDFVKIADFVILTNDR
Sequences:
>Translated_271_residues MFGQESPNNVQIVRTKTPEIVSLEEILKEVSQHDVLVLGEEHDNTVLHRFYEDLVRQLQTRQTFSISLEMLEKDQQFVVD EYLNGTISESQFLSSIVHWKNFKTDYLPIVNLSKEKKSRVIAANPPRRYVNLISKKGLSAYKDLSKEAQSLLPQAYTLEK YLTKEYKQRLTELFGGTEHNSAHQINIEFMALGQATWDQGMAEAISSEIYKTGQKVVHLNGRFHSDRNGGVVTRLREMGH SVLVLSGFQKGRESAEDFVKIADFVILTNDR >Mature_271_residues MFGQESPNNVQIVRTKTPEIVSLEEILKEVSQHDVLVLGEEHDNTVLHRFYEDLVRQLQTRQTFSISLEMLEKDQQFVVD EYLNGTISESQFLSSIVHWKNFKTDYLPIVNLSKEKKSRVIAANPPRRYVNLISKKGLSAYKDLSKEAQSLLPQAYTLEK YLTKEYKQRLTELFGGTEHNSAHQINIEFMALGQATWDQGMAEAISSEIYKTGQKVVHLNGRFHSDRNGGVVTRLREMGH SVLVLSGFQKGRESAEDFVKIADFVILTNDR
Specific function: Unknown
COG id: COG3016
COG function: function code S; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31050; Mature: 31050
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGQESPNNVQIVRTKTPEIVSLEEILKEVSQHDVLVLGEEHDNTVLHRFYEDLVRQLQT CCCCCCCCCEEEEEECCCCEECHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH RQTFSISLEMLEKDQQFVVDEYLNGTISESQFLSSIVHWKNFKTDYLPIVNLSKEKKSRV CHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHCCE IAANPPRRYVNLISKKGLSAYKDLSKEAQSLLPQAYTLEKYLTKEYKQRLTELFGGTEHN EECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC SAHQINIEFMALGQATWDQGMAEAISSEIYKTGQKVVHLNGRFHSDRNGGVVTRLREMGH CCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCHHHHHHHCCC SVLVLSGFQKGRESAEDFVKIADFVILTNDR EEEEEECHHHHHHHHHHHHHHHHEEEEECCC >Mature Secondary Structure MFGQESPNNVQIVRTKTPEIVSLEEILKEVSQHDVLVLGEEHDNTVLHRFYEDLVRQLQT CCCCCCCCCEEEEEECCCCEECHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH RQTFSISLEMLEKDQQFVVDEYLNGTISESQFLSSIVHWKNFKTDYLPIVNLSKEKKSRV CHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHCCE IAANPPRRYVNLISKKGLSAYKDLSKEAQSLLPQAYTLEKYLTKEYKQRLTELFGGTEHN EECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC SAHQINIEFMALGQATWDQGMAEAISSEIYKTGQKVVHLNGRFHSDRNGGVVTRLREMGH CCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCHHHHHHHCCC SVLVLSGFQKGRESAEDFVKIADFVILTNDR EEEEEECHHHHHHHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA