| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183219977
Identifier: 183219977
GI number: 183219977
Start: 558286
End: 559773
Strand: Direct
Name: 183219977
Synonym: LEPBI_I0559
Alternate gene names: NA
Gene position: 558286-559773 (Clockwise)
Preceding gene: 183219976
Following gene: 183219978
Centisome position: 15.51
GC content: 42.27
Gene sequence:
>1488_bases ATGTACAATTCTATTTTGAGAAGTTTTATACTTCTGTTATTTTTTTCCCTGGTACCGAGTGTTTTTGCGCAGGAGCGAGC ACCCAGAACCGACCTTCCGTTCGACATCTCTGAAAAAAAGAGATTGAGTGAACGTGATTTTAAGAATAAAAAAGAGGGCG GTTACTTCACAGGGCTCCCTCTGATCAACTCAGATCCCAACGTCGGGATCGGTTATGGTGCCCGGGTGTTGTATTTTTAC AACGGGAACCGAACTTCTCCGATGTTTGAATACACTCCGTATCGTGTCAGGATCTTTGCTCAGTATTTTAATACGACCAA ACGGGCACCCTACCACCAATTGAGTTTGGATGCACCTTATATTTTTGACACCAAATGGCGGTTACGTGCAGATTTAGTTT ACGAACGAAATCCGAATTCCTTATATTTTGGACTAGGGGAAGGAACTCTCCAACCTCTTTCTTATTTGGAACGGAACGAT CCGAACGGCCGAATTCGTCGAAATGCCCCGTTTTCAGACTATGAAGATAATTTAAGTTTCAGAAGGCCAGGGGATGCGGG TGTTGGTGAAGCTCCCATAGTCAGTGATAATAAATACAATCGTTATGACATTGAAAACCCTAACTTCAGTACATCGGGTG AGTATTCCTTCTTTGGGGGTACACTTCGTACGGTCACTGGTGTTCGGTTATCAAAACAAATCATTCGTAGATTTGATGGT GTGAACAATAATGCTTACCTTGGGCCAGCCGATGGAATTTTAGGTCTACTAGATGTAGATCGTACGTTTGCCACACCACA AGGGGAAACCAAGTTGACTCGTGATGATAAAGATGGTAAAGTCCGTGGGGTTAACGGTGGTTATACAAACACAATCCGTG CTGGTATCGTGTTTGACACTCGTGATTTTGAGCCAGACCCAAACCGAGGATTGTTTTTAGAATACACTCACGAACGTTCC ACAAAAGCAATTGGATCTACTTCTGAATTCAATAAGAACTTAGTATCTGGGCGTATTTTCTTAAGTCCTGTCACTTGGTT TACAAACAAACCTCCAGAAATTTTGGAAAAATTCGTGATCGCCGCTCGTGGAACCATGGTCCAAACGAATGGAGATGCAC CCTTTTACGAATACCGTAACATGTGGGGAACAGAAGTAAACCAATCTGGTCTTGGTGGTAGAACTACCATTCGTGGTTAC AAACAAGATCGATTTGTGGGCCAAACGATGGCTTATGCAAACTTCGAAGTTCGATGGAAATTTGCGGAAGCAGAATTTGG TGGACAACACTTTGATTTCCAACTCGTTCCTTTTTATGATGTAGGACGAGTTTGGGATCGCACCGAAGATGCAAATTTAA AAAACTACAAACACTCAAGGGGTATTGGACTTAGAATTCCTTGGAACCAAGCAACTGTTATCTATTTCGATCATGCGATT TCGAACGAAGATAGACAAACGTTTATCAACTTTAACCACATATTCTAG
Upstream 100 bases:
>100_bases ACACAGAATCGAATTGGAAAAAACATAAATTCTCGAATCTATTTGACATATTTTGCAAATTTCCCAGAGTAAGGCAGTTT CTTTGGCGAATAGGTAGAGA
Downstream 100 bases:
>100_bases GGGAGCGCTTTAAGATTATGAAAATACTTCATTCCTGTTTTGCTCTTTTGGCTTTTTCTTTTTTCATCAACTGTGAGATG AAACCTGTAGACGATGTCTA
Product: putative signal peptide
Products: NA
Alternate protein names: Signal Peptide; OMA87 Related Protein
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MYNSILRSFILLLFFSLVPSVFAQERAPRTDLPFDISEKKRLSERDFKNKKEGGYFTGLPLINSDPNVGIGYGARVLYFY NGNRTSPMFEYTPYRVRIFAQYFNTTKRAPYHQLSLDAPYIFDTKWRLRADLVYERNPNSLYFGLGEGTLQPLSYLERND PNGRIRRNAPFSDYEDNLSFRRPGDAGVGEAPIVSDNKYNRYDIENPNFSTSGEYSFFGGTLRTVTGVRLSKQIIRRFDG VNNNAYLGPADGILGLLDVDRTFATPQGETKLTRDDKDGKVRGVNGGYTNTIRAGIVFDTRDFEPDPNRGLFLEYTHERS TKAIGSTSEFNKNLVSGRIFLSPVTWFTNKPPEILEKFVIAARGTMVQTNGDAPFYEYRNMWGTEVNQSGLGGRTTIRGY KQDRFVGQTMAYANFEVRWKFAEAEFGGQHFDFQLVPFYDVGRVWDRTEDANLKNYKHSRGIGLRIPWNQATVIYFDHAI SNEDRQTFINFNHIF
Sequences:
>Translated_495_residues MYNSILRSFILLLFFSLVPSVFAQERAPRTDLPFDISEKKRLSERDFKNKKEGGYFTGLPLINSDPNVGIGYGARVLYFY NGNRTSPMFEYTPYRVRIFAQYFNTTKRAPYHQLSLDAPYIFDTKWRLRADLVYERNPNSLYFGLGEGTLQPLSYLERND PNGRIRRNAPFSDYEDNLSFRRPGDAGVGEAPIVSDNKYNRYDIENPNFSTSGEYSFFGGTLRTVTGVRLSKQIIRRFDG VNNNAYLGPADGILGLLDVDRTFATPQGETKLTRDDKDGKVRGVNGGYTNTIRAGIVFDTRDFEPDPNRGLFLEYTHERS TKAIGSTSEFNKNLVSGRIFLSPVTWFTNKPPEILEKFVIAARGTMVQTNGDAPFYEYRNMWGTEVNQSGLGGRTTIRGY KQDRFVGQTMAYANFEVRWKFAEAEFGGQHFDFQLVPFYDVGRVWDRTEDANLKNYKHSRGIGLRIPWNQATVIYFDHAI SNEDRQTFINFNHIF >Mature_495_residues MYNSILRSFILLLFFSLVPSVFAQERAPRTDLPFDISEKKRLSERDFKNKKEGGYFTGLPLINSDPNVGIGYGARVLYFY NGNRTSPMFEYTPYRVRIFAQYFNTTKRAPYHQLSLDAPYIFDTKWRLRADLVYERNPNSLYFGLGEGTLQPLSYLERND PNGRIRRNAPFSDYEDNLSFRRPGDAGVGEAPIVSDNKYNRYDIENPNFSTSGEYSFFGGTLRTVTGVRLSKQIIRRFDG VNNNAYLGPADGILGLLDVDRTFATPQGETKLTRDDKDGKVRGVNGGYTNTIRAGIVFDTRDFEPDPNRGLFLEYTHERS TKAIGSTSEFNKNLVSGRIFLSPVTWFTNKPPEILEKFVIAARGTMVQTNGDAPFYEYRNMWGTEVNQSGLGGRTTIRGY KQDRFVGQTMAYANFEVRWKFAEAEFGGQHFDFQLVPFYDVGRVWDRTEDANLKNYKHSRGIGLRIPWNQATVIYFDHAI SNEDRQTFINFNHIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56872; Mature: 56872
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNSILRSFILLLFFSLVPSVFAQERAPRTDLPFDISEKKRLSERDFKNKKEGGYFTGLP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCC LINSDPNVGIGYGARVLYFYNGNRTSPMFEYTPYRVRIFAQYFNTTKRAPYHQLSLDAPY EECCCCCCCCCCCEEEEEEECCCCCCCEEEECCEEEEEEEEHHCCCCCCCCEEEECCCCE IFDTKWRLRADLVYERNPNSLYFGLGEGTLQPLSYLERNDPNGRIRRNAPFSDYEDNLSF EECCCEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCE RRPGDAGVGEAPIVSDNKYNRYDIENPNFSTSGEYSFFGGTLRTVTGVRLSKQIIRRFDG ECCCCCCCCCCCEECCCCCCEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCC VNNNAYLGPADGILGLLDVDRTFATPQGETKLTRDDKDGKVRGVNGGYTNTIRAGIVFDT CCCCEEECCCCCEEEEEECCCCCCCCCCCCEECCCCCCCEEEECCCCCCCEEEEEEEEEC RDFEPDPNRGLFLEYTHERSTKAIGSTSEFNKNLVSGRIFLSPVTWFTNKPPEILEKFVI CCCCCCCCCCEEEEECCCCCCHHCCCHHHHHHHHHCCEEEEEEEHHCCCCCHHHHHHHHH AARGTMVQTNGDAPFYEYRNMWGTEVNQSGLGGRTTIRGYKQDRFVGQTMAYANFEVRWK HHCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHHEEEEECEEEEEE FAEAEFGGQHFDFQLVPFYDVGRVWDRTEDANLKNYKHSRGIGLRIPWNQATVIYFDHAI EECCCCCCCEEEEEEECCHHCCHHHCCCCCCCCCCCHHCCCCEEEECCCCEEEEEEECCC SNEDRQTFINFNHIF CCCCCEEEEEEECCC >Mature Secondary Structure MYNSILRSFILLLFFSLVPSVFAQERAPRTDLPFDISEKKRLSERDFKNKKEGGYFTGLP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCC LINSDPNVGIGYGARVLYFYNGNRTSPMFEYTPYRVRIFAQYFNTTKRAPYHQLSLDAPY EECCCCCCCCCCCEEEEEEECCCCCCCEEEECCEEEEEEEEHHCCCCCCCCEEEECCCCE IFDTKWRLRADLVYERNPNSLYFGLGEGTLQPLSYLERNDPNGRIRRNAPFSDYEDNLSF EECCCEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCE RRPGDAGVGEAPIVSDNKYNRYDIENPNFSTSGEYSFFGGTLRTVTGVRLSKQIIRRFDG ECCCCCCCCCCCEECCCCCCEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCC VNNNAYLGPADGILGLLDVDRTFATPQGETKLTRDDKDGKVRGVNGGYTNTIRAGIVFDT CCCCEEECCCCCEEEEEECCCCCCCCCCCCEECCCCCCCEEEECCCCCCCEEEEEEEEEC RDFEPDPNRGLFLEYTHERSTKAIGSTSEFNKNLVSGRIFLSPVTWFTNKPPEILEKFVI CCCCCCCCCCEEEEECCCCCCHHCCCHHHHHHHHHCCEEEEEEEHHCCCCCHHHHHHHHH AARGTMVQTNGDAPFYEYRNMWGTEVNQSGLGGRTTIRGYKQDRFVGQTMAYANFEVRWK HHCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHHEEEEECEEEEEE FAEAEFGGQHFDFQLVPFYDVGRVWDRTEDANLKNYKHSRGIGLRIPWNQATVIYFDHAI EECCCCCCCEEEEEEECCHHCCHHHCCCCCCCCCCCHHCCCCEEEECCCCEEEEEEECCC SNEDRQTFINFNHIF CCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA