Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is 183219978

Identifier: 183219978

GI number: 183219978

Start: 559791

End: 560474

Strand: Direct

Name: 183219978

Synonym: LEPBI_I0560

Alternate gene names: NA

Gene position: 559791-560474 (Clockwise)

Preceding gene: 183219977

Following gene: 183219979

Centisome position: 15.55

GC content: 44.3

Gene sequence:

>684_bases
ATGAAAATACTTCATTCCTGTTTTGCTCTTTTGGCTTTTTCTTTTTTCATCAACTGTGAGATGAAACCTGTAGACGATGT
CTATGGATTAAGCCCAGAAGAAACCAACCAACTTTTCGCTGGACTCATCGCAAACCAAAGTTTGCGTGATAACGGCAACG
GAACGATTACTGATGTGATCACCAATTTGATTTGGCAAAAGTGTACACATGGACAAGTGTATCGTGCTGGATTTAACGAT
TGTTTGGGGGCACCGCAAGGGTCCATTTACAATCCGTATGATTCCAATCGCGCAGGTGCGATCCAAGTTGCCTTTTGTGA
TTCCAAAACACATGCTTGTAATTCAATTTCCTTTCCTCAGGTCCTCCAAGGTTTTTCCTCGATTGGAATCTTGGGAACAA
GTGAGTTATATGCGGCTTGTCAAAATAGCAACTTCTTAGGAGCAACTTGGCGAGTGCCAACTCCGATTGAATTCCAAAGG
TTGGTCATTCCAGGTCGTGCCGCGACTTTACAATTTTTCCCTTCCATCCAGGAAGAGGACTATTGGACCGCATGGTCTAA
CCAAGATGATTTACCAGGGGAGACTGCATTTGCAATTTCCTTTGATCGTCAGTCCTATGGGGTCCAGCGGTCTGTCGTCA
AAACCCAACGGAATTATGTCCGTTGTGTGAGACAAGGTCCGTAA

Upstream 100 bases:

>100_bases
ACCAAGCAACTGTTATCTATTTCGATCATGCGATTTCGAACGAAGATAGACAAACGTTTATCAACTTTAACCACATATTC
TAGGGGAGCGCTTTAAGATT

Downstream 100 bases:

>100_bases
ATTCGCTCCATTTTCTTCACTCTCCCAAATCCATTGGGAGAGATTTTACTTTCCAAAATTCCAATTTCATACTAATCTTT
TCCTAATACAAACCGAAGTA

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKILHSCFALLAFSFFINCEMKPVDDVYGLSPEETNQLFAGLIANQSLRDNGNGTITDVITNLIWQKCTHGQVYRAGFND
CLGAPQGSIYNPYDSNRAGAIQVAFCDSKTHACNSISFPQVLQGFSSIGILGTSELYAACQNSNFLGATWRVPTPIEFQR
LVIPGRAATLQFFPSIQEEDYWTAWSNQDDLPGETAFAISFDRQSYGVQRSVVKTQRNYVRCVRQGP

Sequences:

>Translated_227_residues
MKILHSCFALLAFSFFINCEMKPVDDVYGLSPEETNQLFAGLIANQSLRDNGNGTITDVITNLIWQKCTHGQVYRAGFND
CLGAPQGSIYNPYDSNRAGAIQVAFCDSKTHACNSISFPQVLQGFSSIGILGTSELYAACQNSNFLGATWRVPTPIEFQR
LVIPGRAATLQFFPSIQEEDYWTAWSNQDDLPGETAFAISFDRQSYGVQRSVVKTQRNYVRCVRQGP
>Mature_227_residues
MKILHSCFALLAFSFFINCEMKPVDDVYGLSPEETNQLFAGLIANQSLRDNGNGTITDVITNLIWQKCTHGQVYRAGFND
CLGAPQGSIYNPYDSNRAGAIQVAFCDSKTHACNSISFPQVLQGFSSIGILGTSELYAACQNSNFLGATWRVPTPIEFQR
LVIPGRAATLQFFPSIQEEDYWTAWSNQDDLPGETAFAISFDRQSYGVQRSVVKTQRNYVRCVRQGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25205; Mature: 25205

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILHSCFALLAFSFFINCEMKPVDDVYGLSPEETNQLFAGLIANQSLRDNGNGTITDVI
CHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
TNLIWQKCTHGQVYRAGFNDCLGAPQGSIYNPYDSNRAGAIQVAFCDSKTHACNSISFPQ
HHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
VLQGFSSIGILGTSELYAACQNSNFLGATWRVPTPIEFQRLVIPGRAATLQFFPSIQEED
HHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCC
YWTAWSNQDDLPGETAFAISFDRQSYGVQRSVVKTQRNYVRCVRQGP
CEECCCCCCCCCCCEEEEEEECCHHHCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKILHSCFALLAFSFFINCEMKPVDDVYGLSPEETNQLFAGLIANQSLRDNGNGTITDVI
CHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
TNLIWQKCTHGQVYRAGFNDCLGAPQGSIYNPYDSNRAGAIQVAFCDSKTHACNSISFPQ
HHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
VLQGFSSIGILGTSELYAACQNSNFLGATWRVPTPIEFQRLVIPGRAATLQFFPSIQEED
HHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCC
YWTAWSNQDDLPGETAFAISFDRQSYGVQRSVVKTQRNYVRCVRQGP
CEECCCCCCCCCCCEEEEEEECCHHHCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA