| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219978
Identifier: 183219978
GI number: 183219978
Start: 559791
End: 560474
Strand: Direct
Name: 183219978
Synonym: LEPBI_I0560
Alternate gene names: NA
Gene position: 559791-560474 (Clockwise)
Preceding gene: 183219977
Following gene: 183219979
Centisome position: 15.55
GC content: 44.3
Gene sequence:
>684_bases ATGAAAATACTTCATTCCTGTTTTGCTCTTTTGGCTTTTTCTTTTTTCATCAACTGTGAGATGAAACCTGTAGACGATGT CTATGGATTAAGCCCAGAAGAAACCAACCAACTTTTCGCTGGACTCATCGCAAACCAAAGTTTGCGTGATAACGGCAACG GAACGATTACTGATGTGATCACCAATTTGATTTGGCAAAAGTGTACACATGGACAAGTGTATCGTGCTGGATTTAACGAT TGTTTGGGGGCACCGCAAGGGTCCATTTACAATCCGTATGATTCCAATCGCGCAGGTGCGATCCAAGTTGCCTTTTGTGA TTCCAAAACACATGCTTGTAATTCAATTTCCTTTCCTCAGGTCCTCCAAGGTTTTTCCTCGATTGGAATCTTGGGAACAA GTGAGTTATATGCGGCTTGTCAAAATAGCAACTTCTTAGGAGCAACTTGGCGAGTGCCAACTCCGATTGAATTCCAAAGG TTGGTCATTCCAGGTCGTGCCGCGACTTTACAATTTTTCCCTTCCATCCAGGAAGAGGACTATTGGACCGCATGGTCTAA CCAAGATGATTTACCAGGGGAGACTGCATTTGCAATTTCCTTTGATCGTCAGTCCTATGGGGTCCAGCGGTCTGTCGTCA AAACCCAACGGAATTATGTCCGTTGTGTGAGACAAGGTCCGTAA
Upstream 100 bases:
>100_bases ACCAAGCAACTGTTATCTATTTCGATCATGCGATTTCGAACGAAGATAGACAAACGTTTATCAACTTTAACCACATATTC TAGGGGAGCGCTTTAAGATT
Downstream 100 bases:
>100_bases ATTCGCTCCATTTTCTTCACTCTCCCAAATCCATTGGGAGAGATTTTACTTTCCAAAATTCCAATTTCATACTAATCTTT TCCTAATACAAACCGAAGTA
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKILHSCFALLAFSFFINCEMKPVDDVYGLSPEETNQLFAGLIANQSLRDNGNGTITDVITNLIWQKCTHGQVYRAGFND CLGAPQGSIYNPYDSNRAGAIQVAFCDSKTHACNSISFPQVLQGFSSIGILGTSELYAACQNSNFLGATWRVPTPIEFQR LVIPGRAATLQFFPSIQEEDYWTAWSNQDDLPGETAFAISFDRQSYGVQRSVVKTQRNYVRCVRQGP
Sequences:
>Translated_227_residues MKILHSCFALLAFSFFINCEMKPVDDVYGLSPEETNQLFAGLIANQSLRDNGNGTITDVITNLIWQKCTHGQVYRAGFND CLGAPQGSIYNPYDSNRAGAIQVAFCDSKTHACNSISFPQVLQGFSSIGILGTSELYAACQNSNFLGATWRVPTPIEFQR LVIPGRAATLQFFPSIQEEDYWTAWSNQDDLPGETAFAISFDRQSYGVQRSVVKTQRNYVRCVRQGP >Mature_227_residues MKILHSCFALLAFSFFINCEMKPVDDVYGLSPEETNQLFAGLIANQSLRDNGNGTITDVITNLIWQKCTHGQVYRAGFND CLGAPQGSIYNPYDSNRAGAIQVAFCDSKTHACNSISFPQVLQGFSSIGILGTSELYAACQNSNFLGATWRVPTPIEFQR LVIPGRAATLQFFPSIQEEDYWTAWSNQDDLPGETAFAISFDRQSYGVQRSVVKTQRNYVRCVRQGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25205; Mature: 25205
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILHSCFALLAFSFFINCEMKPVDDVYGLSPEETNQLFAGLIANQSLRDNGNGTITDVI CHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH TNLIWQKCTHGQVYRAGFNDCLGAPQGSIYNPYDSNRAGAIQVAFCDSKTHACNSISFPQ HHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH VLQGFSSIGILGTSELYAACQNSNFLGATWRVPTPIEFQRLVIPGRAATLQFFPSIQEED HHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCC YWTAWSNQDDLPGETAFAISFDRQSYGVQRSVVKTQRNYVRCVRQGP CEECCCCCCCCCCCEEEEEEECCHHHCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKILHSCFALLAFSFFINCEMKPVDDVYGLSPEETNQLFAGLIANQSLRDNGNGTITDVI CHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH TNLIWQKCTHGQVYRAGFNDCLGAPQGSIYNPYDSNRAGAIQVAFCDSKTHACNSISFPQ HHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH VLQGFSSIGILGTSELYAACQNSNFLGATWRVPTPIEFQRLVIPGRAATLQFFPSIQEED HHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCC YWTAWSNQDDLPGETAFAISFDRQSYGVQRSVVKTQRNYVRCVRQGP CEECCCCCCCCCCCEEEEEEECCHHHCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA