| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219815
Identifier: 183219815
GI number: 183219815
Start: 391470
End: 392390
Strand: Direct
Name: 183219815
Synonym: LEPBI_I0393
Alternate gene names: NA
Gene position: 391470-392390 (Clockwise)
Preceding gene: 183219814
Following gene: 183219817
Centisome position: 10.88
GC content: 37.13
Gene sequence:
>921_bases TTGTTAATACCAATTAGAATGCCACTTCAAGGATTTGTTGTGAAAAAAATGAACCAATTTCTCTTTCTCGTATTAACTAT TTTTCTTCTAAGTTGTGGTAAAGAATCCCAAGAGGAATCCGTGTCCGTGGCACATGATGAAATGAAGATCTCTGGGGCTT CCCGTGAGAAAAAAATGGCTCCCAGTGCTCCTGCTATGGAAGATCGTGTAGAGGAAGTTACACAATCAAAAGACAATGCC TTAGGGCCAGTATTCTTTCCCAATCAAAATAACCAAGAACGTCTCCTTGAATTTCAAATTGAATTGAGTTACCAAACGTT GGACTTAATCAAAACAAGAAAAGATTTGTTATTGTTTATCACAAAATATGGATTCATTGAATCAAGTTCGGCGCTCAATT CCGATTCACCTACGATGAATGTTCGATTCCGAATTCGAGCAGAGAAACTTTCTGAAGCATTGTTGGAATTAGATACCTAT GGTACTTTGTTAAGTGAAACTATCACTACCATCGATCATACAGAAGGTATGGTTTGGGAAAAGATCAAAACCACTCGTGA AAAAATTCGAGTCAAAAGAAGGACGTTTGCAAACAATCAAACCACAAGTAATTCCAAAAATTGGGAAGCAATTGAAGAAT CCATTTCCACAAGCGAAGATGGATTGGATCAATCTGAATTTCAAATTTGGAAGATCAATGATCGTGTGAAATGGGCCACT TTAAATCTGAGTTTTAGTCTTCCCGCGCCTTCTGACAAAGTCATTGTTCCTGAATACCGAAATGCACTGGTTGGGATTAC AAACCTATTGTTAGAATTTACCTATTTACTGGTCTGGATGATCCCAATCTTTGTGTTCGCCGGACTTTTATATGTATCAA GTAAAAAATTGGTTCAGTGGTTTCGACAAAAGAAAAAGTAA
Upstream 100 bases:
>100_bases AAAAGCATAACACATTTTTCTTTTACATTGGATTGGTTCCCATATCATTTTGGATTCCACTCTCTGTGACTAACTGAAGT GAGAAAGAAGGAACTACCAA
Downstream 100 bases:
>100_bases TTCCATTAACAGAATTTATTCTCCGCAGGATTGAGAATTGATGTTAAATGCCTTTTTCTCTTCCAAGTCGGAGATGGTTT TGGCATAATCACTTTGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLIPIRMPLQGFVVKKMNQFLFLVLTIFLLSCGKESQEESVSVAHDEMKISGASREKKMAPSAPAMEDRVEEVTQSKDNA LGPVFFPNQNNQERLLEFQIELSYQTLDLIKTRKDLLLFITKYGFIESSSALNSDSPTMNVRFRIRAEKLSEALLELDTY GTLLSETITTIDHTEGMVWEKIKTTREKIRVKRRTFANNQTTSNSKNWEAIEESISTSEDGLDQSEFQIWKINDRVKWAT LNLSFSLPAPSDKVIVPEYRNALVGITNLLLEFTYLLVWMIPIFVFAGLLYVSSKKLVQWFRQKKK
Sequences:
>Translated_306_residues MLIPIRMPLQGFVVKKMNQFLFLVLTIFLLSCGKESQEESVSVAHDEMKISGASREKKMAPSAPAMEDRVEEVTQSKDNA LGPVFFPNQNNQERLLEFQIELSYQTLDLIKTRKDLLLFITKYGFIESSSALNSDSPTMNVRFRIRAEKLSEALLELDTY GTLLSETITTIDHTEGMVWEKIKTTREKIRVKRRTFANNQTTSNSKNWEAIEESISTSEDGLDQSEFQIWKINDRVKWAT LNLSFSLPAPSDKVIVPEYRNALVGITNLLLEFTYLLVWMIPIFVFAGLLYVSSKKLVQWFRQKKK >Mature_306_residues MLIPIRMPLQGFVVKKMNQFLFLVLTIFLLSCGKESQEESVSVAHDEMKISGASREKKMAPSAPAMEDRVEEVTQSKDNA LGPVFFPNQNNQERLLEFQIELSYQTLDLIKTRKDLLLFITKYGFIESSSALNSDSPTMNVRFRIRAEKLSEALLELDTY GTLLSETITTIDHTEGMVWEKIKTTREKIRVKRRTFANNQTTSNSKNWEAIEESISTSEDGLDQSEFQIWKINDRVKWAT LNLSFSLPAPSDKVIVPEYRNALVGITNLLLEFTYLLVWMIPIFVFAGLLYVSSKKLVQWFRQKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35222; Mature: 35222
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIPIRMPLQGFVVKKMNQFLFLVLTIFLLSCGKESQEESVSVAHDEMKISGASREKKMA CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCHHCCC PSAPAMEDRVEEVTQSKDNALGPVFFPNQNNQERLLEFQIELSYQTLDLIKTRKDLLLFI CCCCCHHHHHHHHHHCCCCCCCCEECCCCCCHHHEEEEEEEECHHHHHHHHHHHHHHHHH TKYGFIESSSALNSDSPTMNVRFRIRAEKLSEALLELDTYGTLLSETITTIDHTEGMVWE HHHCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KIKTTREKIRVKRRTFANNQTTSNSKNWEAIEESISTSEDGLDQSEFQIWKINDRVKWAT HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEE LNLSFSLPAPSDKVIVPEYRNALVGITNLLLEFTYLLVWMIPIFVFAGLLYVSSKKLVQW EEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRQKKK HHHHCC >Mature Secondary Structure MLIPIRMPLQGFVVKKMNQFLFLVLTIFLLSCGKESQEESVSVAHDEMKISGASREKKMA CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCHHCCC PSAPAMEDRVEEVTQSKDNALGPVFFPNQNNQERLLEFQIELSYQTLDLIKTRKDLLLFI CCCCCHHHHHHHHHHCCCCCCCCEECCCCCCHHHEEEEEEEECHHHHHHHHHHHHHHHHH TKYGFIESSSALNSDSPTMNVRFRIRAEKLSEALLELDTYGTLLSETITTIDHTEGMVWE HHHCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KIKTTREKIRVKRRTFANNQTTSNSKNWEAIEESISTSEDGLDQSEFQIWKINDRVKWAT HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEE LNLSFSLPAPSDKVIVPEYRNALVGITNLLLEFTYLLVWMIPIFVFAGLLYVSSKKLVQW EEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRQKKK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA