| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219779
Identifier: 183219779
GI number: 183219779
Start: 355772
End: 357373
Strand: Direct
Name: 183219779
Synonym: LEPBI_I0356
Alternate gene names: NA
Gene position: 355772-357373 (Clockwise)
Preceding gene: 183219778
Following gene: 183219780
Centisome position: 9.88
GC content: 40.2
Gene sequence:
>1602_bases TTGGTAGAACATGGACTCTCGGAAGTATTGGATGTGTTTGGAAATCCATTAGCGGTTTCCAAACACCCTAGCGCCATTAT TTTTGCCGTCACTTCGGCCAATCACAACAACACAAGACGAAACCCTCTCTCTCTTTACCAAAGGGCGATGATGATCCAAG ATTTTTCAAAAGAATTTAAGATTCCAAGTCTTGTCATACCCATTGATGATATTGGAATGTCACCTAACTTTGCTTCGTAT ACTTTGAAAAAAATTGAAGTGGAAACCGAGTTAAGACTCAAATTGACTCCAAAGAATACGATTGTCCTCTGTTCGACACC CGTCGCCAATTTATACCTTACCTTAGGTTTTTTTGTTTTACCTGTGGAAAAAGTTCCAGGCCCAAAACTTTCTTTTTTTG CAAAACTCCCATGGGAAGAACTGGAAGGGATTGTCTCCCGACGAAAAGAAAGGAAGGCAACGACTTCAGCTCGACCATTC ACTCTCGGATTAGAGGACCCAACCCAAATTGGTGCCGCGGAGGAAGAGGGGATCTACCATAACTTAGATAGAGCTTGCCT TCGTTTGTGGAATGACTATGGACTCTTTGAGAAAGTTGATATGTTGTTTTCGGATTCTCTCATTGGTGATGATGGAGACC TAACAGAATCCAGAGATTATAATACCTATGTCCGCGAAATGGACAATATCGCCGAACTCAAATTCCAAGAAACAAAACCC TTTGTGAAACCAGGTAGGATTGGTGATATTGGATGTGCTGTTGGTTCTTGGATCAAACTGGTTTGCCAGGATCCTAGTGG TTTAGAATCCGATTTTTATGGAGTTGAGATCGCAAGGCATCTTTACCAAATCTGTGAACAACGAAAAGAAAATGGTGAGT TTTCGAATCCCAATGTCTTTTTTTTACGAAAGAATGCTGTGAGTGGACTTGTTTTTCCAAAGATGAGTATGAACACAATC CATACATCTTCCCTCACACATGAAATTGAGTCTTATGGCGGTCGAAGCCAACTGGTTTCTTTTATCCAGAATCGTTACGA TGAATTGGTCATGGGTGGGGTTTGGATCAACCGAGATGTGGTGGGACCCGAAGGCAAAGAAATAGAAGTTTTTGTTTGGA TGGAAGAGGAATCGGGCACTAACCATGGCCGTGGTCCAGAAGCCTTTTCCAATTCCAAAGAATACCTAGATTCCTTGTCC ACAAAAGAACGATTTTTTCAATTCCAAAAGGACTTTCGTAAAGTGGAAGGTTATGTGCTTAGGACGGACACCTTTTTCGT CGATGGTATAGAATACCATCGTATGAAACTCAAAGATATCTGCGAATACGTTTCCAAAAAAGATTACACTGACAATTGGG ACAGTGAAATGCATGAGTCTTTTTGTTTTTGGAGTTTCAATGAATGGAAAGAAAATTTAGAATCAATCGGATTTAAAATT TCACCTAATTCATACGAATATCGTAATGAGTGGCTTGTACAAAATCGGTATGAAGGTAAGGTAAAACTTTTTACATCACA ATCGCCAAGTCCCCAAATCCATTCTGAACTCATTCCATTTGATTTTCCAGTGACCCATATGCTAATGTTAGCGGAAAAAT AA
Upstream 100 bases:
>100_bases GATTGTTTTAGAAAATCCGAAAGCATAGTACAAAATGTACTTATTATTTCCGGGGCGTCACCATCTCCTCACGAGGTACC AAAAAGAGTATTTACTCCAA
Downstream 100 bases:
>100_bases ATGCAATCAGAAGTTCGGCGTAATCTCGATAAAATTCGGACTGTGTTTCGATCCAATTATTTATTAGCAGAATTGGATGA TTCAGAACGAGAATCTCTCC
Product: putative transferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MVEHGLSEVLDVFGNPLAVSKHPSAIIFAVTSANHNNTRRNPLSLYQRAMMIQDFSKEFKIPSLVIPIDDIGMSPNFASY TLKKIEVETELRLKLTPKNTIVLCSTPVANLYLTLGFFVLPVEKVPGPKLSFFAKLPWEELEGIVSRRKERKATTSARPF TLGLEDPTQIGAAEEEGIYHNLDRACLRLWNDYGLFEKVDMLFSDSLIGDDGDLTESRDYNTYVREMDNIAELKFQETKP FVKPGRIGDIGCAVGSWIKLVCQDPSGLESDFYGVEIARHLYQICEQRKENGEFSNPNVFFLRKNAVSGLVFPKMSMNTI HTSSLTHEIESYGGRSQLVSFIQNRYDELVMGGVWINRDVVGPEGKEIEVFVWMEEESGTNHGRGPEAFSNSKEYLDSLS TKERFFQFQKDFRKVEGYVLRTDTFFVDGIEYHRMKLKDICEYVSKKDYTDNWDSEMHESFCFWSFNEWKENLESIGFKI SPNSYEYRNEWLVQNRYEGKVKLFTSQSPSPQIHSELIPFDFPVTHMLMLAEK
Sequences:
>Translated_533_residues MVEHGLSEVLDVFGNPLAVSKHPSAIIFAVTSANHNNTRRNPLSLYQRAMMIQDFSKEFKIPSLVIPIDDIGMSPNFASY TLKKIEVETELRLKLTPKNTIVLCSTPVANLYLTLGFFVLPVEKVPGPKLSFFAKLPWEELEGIVSRRKERKATTSARPF TLGLEDPTQIGAAEEEGIYHNLDRACLRLWNDYGLFEKVDMLFSDSLIGDDGDLTESRDYNTYVREMDNIAELKFQETKP FVKPGRIGDIGCAVGSWIKLVCQDPSGLESDFYGVEIARHLYQICEQRKENGEFSNPNVFFLRKNAVSGLVFPKMSMNTI HTSSLTHEIESYGGRSQLVSFIQNRYDELVMGGVWINRDVVGPEGKEIEVFVWMEEESGTNHGRGPEAFSNSKEYLDSLS TKERFFQFQKDFRKVEGYVLRTDTFFVDGIEYHRMKLKDICEYVSKKDYTDNWDSEMHESFCFWSFNEWKENLESIGFKI SPNSYEYRNEWLVQNRYEGKVKLFTSQSPSPQIHSELIPFDFPVTHMLMLAEK >Mature_533_residues MVEHGLSEVLDVFGNPLAVSKHPSAIIFAVTSANHNNTRRNPLSLYQRAMMIQDFSKEFKIPSLVIPIDDIGMSPNFASY TLKKIEVETELRLKLTPKNTIVLCSTPVANLYLTLGFFVLPVEKVPGPKLSFFAKLPWEELEGIVSRRKERKATTSARPF TLGLEDPTQIGAAEEEGIYHNLDRACLRLWNDYGLFEKVDMLFSDSLIGDDGDLTESRDYNTYVREMDNIAELKFQETKP FVKPGRIGDIGCAVGSWIKLVCQDPSGLESDFYGVEIARHLYQICEQRKENGEFSNPNVFFLRKNAVSGLVFPKMSMNTI HTSSLTHEIESYGGRSQLVSFIQNRYDELVMGGVWINRDVVGPEGKEIEVFVWMEEESGTNHGRGPEAFSNSKEYLDSLS TKERFFQFQKDFRKVEGYVLRTDTFFVDGIEYHRMKLKDICEYVSKKDYTDNWDSEMHESFCFWSFNEWKENLESIGFKI SPNSYEYRNEWLVQNRYEGKVKLFTSQSPSPQIHSELIPFDFPVTHMLMLAEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61321; Mature: 61321
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEHGLSEVLDVFGNPLAVSKHPSAIIFAVTSANHNNTRRNPLSLYQRAMMIQDFSKEFK CCCCCHHHHHHHCCCCEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC IPSLVIPIDDIGMSPNFASYTLKKIEVETELRLKLTPKNTIVLCSTPVANLYLTLGFFVL CCEEEEEHHHCCCCCCHHHHEEEEEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHEE PVEKVPGPKLSFFAKLPWEELEGIVSRRKERKATTSARPFTLGLEDPTQIGAAEEEGIYH ECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHCCCCCCCCCHH NLDRACLRLWNDYGLFEKVDMLFSDSLIGDDGDLTESRDYNTYVREMDNIAELKFQETKP HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCC FVKPGRIGDIGCAVGSWIKLVCQDPSGLESDFYGVEIARHLYQICEQRKENGEFSNPNVF CCCCCCCCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE FLRKNAVSGLVFPKMSMNTIHTSSLTHEIESYGGRSQLVSFIQNRYDELVMGGVWINRDV EEECCCCCCEECCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCEEEECCC VGPEGKEIEVFVWMEEESGTNHGRGPEAFSNSKEYLDSLSTKERFFQFQKDFRKVEGYVL CCCCCCEEEEEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE RTDTFFVDGIEYHRMKLKDICEYVSKKDYTDNWDSEMHESFCFWSFNEWKENLESIGFKI EECEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEECHHHHHHHHHHCCEEE SPNSYEYRNEWLVQNRYEGKVKLFTSQSPSPQIHSELIPFDFPVTHMLMLAEK CCCCCCCCCHHEECCCCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MVEHGLSEVLDVFGNPLAVSKHPSAIIFAVTSANHNNTRRNPLSLYQRAMMIQDFSKEFK CCCCCHHHHHHHCCCCEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC IPSLVIPIDDIGMSPNFASYTLKKIEVETELRLKLTPKNTIVLCSTPVANLYLTLGFFVL CCEEEEEHHHCCCCCCHHHHEEEEEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHEE PVEKVPGPKLSFFAKLPWEELEGIVSRRKERKATTSARPFTLGLEDPTQIGAAEEEGIYH ECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHCCCCCCCCCHH NLDRACLRLWNDYGLFEKVDMLFSDSLIGDDGDLTESRDYNTYVREMDNIAELKFQETKP HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCC FVKPGRIGDIGCAVGSWIKLVCQDPSGLESDFYGVEIARHLYQICEQRKENGEFSNPNVF CCCCCCCCCHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE FLRKNAVSGLVFPKMSMNTIHTSSLTHEIESYGGRSQLVSFIQNRYDELVMGGVWINRDV EEECCCCCCEECCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCEEEECCC VGPEGKEIEVFVWMEEESGTNHGRGPEAFSNSKEYLDSLSTKERFFQFQKDFRKVEGYVL CCCCCCEEEEEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE RTDTFFVDGIEYHRMKLKDICEYVSKKDYTDNWDSEMHESFCFWSFNEWKENLESIGFKI EECEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEECHHHHHHHHHHCCEEE SPNSYEYRNEWLVQNRYEGKVKLFTSQSPSPQIHSELIPFDFPVTHMLMLAEK CCCCCCCCCHHEECCCCCCEEEEEECCCCCCCHHHCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA