| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219756
Identifier: 183219756
GI number: 183219756
Start: 333830
End: 334870
Strand: Reverse
Name: 183219756
Synonym: LEPBI_I0332
Alternate gene names: NA
Gene position: 334870-333830 (Counterclockwise)
Preceding gene: 183219757
Following gene: 183219755
Centisome position: 9.3
GC content: 37.08
Gene sequence:
>1041_bases GTGAAAAAGTTATTAACAATTCTAATTTTTGCTTTGAGTTTCCAATTATATGCCGGTGACTTAAAAGACGACCTAAAGAG TGCAACAGGTGATAGCGAAAAAATATCCATCCTCGCTGAGATGGGTAAATCGGGAGAAACAAAATATGTAAAACCTGTTA CCGAACAATTGGAAAAAGGGGAATCCAGTAAAATTCGCGCCCAAGCTGCCACCTCCCTAGGTGATCTAAAAGCAGGGTTC AATGAATTACACAAAGCATTCGACAACGATGATGTTTATGTGAGAGAGGCCTCCATAGAAGCACTAGCAAAAATTGGAAA TTCTAAATCACAATCTTATTTTGAAAAAGGAACAAAAGATAAAAATGAAAAGATTCGTTTTTATAGCGTTCAAGGATTGT CAAAGGTTGGAAGAAGTGGAAATGCTCCTATCTTCAGAAATGCAATCGAATGGAAAGACAAACCGACCCAACTCGCTGCC ATTCGTGGGCTTGGGAACATCAATGCATGGGATGAGTGGAAGTATGTAAAACCATTTTGTTCAAACTCTGACAAAGATTT TGTGATGGCATGTTTGTACAGCGCTGGGAAATTTAAAACCGACGAATCATTGTTAGCGATTGAAAGTTTATTAGCAAGCC CTGACACAGAAATTAGCAAAGAAGCTTTTGATGCCATTGCCAATTTTAAACCAGCACAAGTCATTCCTACTCTCATTCGA TTTAAAAAAACAAATCCAAATCATCCAAATTTAGCTGATTTAAGTGCCAATTTAAAAAAACTGAAAGCAGCAAAACAATA TGCGATCATCAATGTTTCGGATCGATTGAACTTACGTTCCAAAGCGAATGAAAGATCGGAAGTGATCACTGGTCTTCCTG GAAATGCTGTGGTAGAAATTATCTCTAGAGAACCAAGAAAATACATTATCACCAATAGTAAAGGGGAAGAGATGGAAGAC TTCTGGTACCAAATCAAAACAAGTGATGGTAAAAAAGGATATTTATTCGGTGAATACATCCATGTAGTGGATAGTTATTA A
Upstream 100 bases:
>100_bases ATACTTGAGTTTCATTTTTCATGGAATGAATCCTTGACAAAGTTAAAAATTTACTTAACAGTTGTTGAATTCTGGCTAAT GCCAACGACTGGAGTGTTTC
Downstream 100 bases:
>100_bases AAGGTTCACCCATATGAAATTAATTCAAAATTCCTTCGGGATCTTGATCTTATTGTCAGCTGTAGTTCTCGTGAACTGCA GCAAAAAAAAAGTAGAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MKKLLTILIFALSFQLYAGDLKDDLKSATGDSEKISILAEMGKSGETKYVKPVTEQLEKGESSKIRAQAATSLGDLKAGF NELHKAFDNDDVYVREASIEALAKIGNSKSQSYFEKGTKDKNEKIRFYSVQGLSKVGRSGNAPIFRNAIEWKDKPTQLAA IRGLGNINAWDEWKYVKPFCSNSDKDFVMACLYSAGKFKTDESLLAIESLLASPDTEISKEAFDAIANFKPAQVIPTLIR FKKTNPNHPNLADLSANLKKLKAAKQYAIINVSDRLNLRSKANERSEVITGLPGNAVVEIISREPRKYIITNSKGEEMED FWYQIKTSDGKKGYLFGEYIHVVDSY
Sequences:
>Translated_346_residues MKKLLTILIFALSFQLYAGDLKDDLKSATGDSEKISILAEMGKSGETKYVKPVTEQLEKGESSKIRAQAATSLGDLKAGF NELHKAFDNDDVYVREASIEALAKIGNSKSQSYFEKGTKDKNEKIRFYSVQGLSKVGRSGNAPIFRNAIEWKDKPTQLAA IRGLGNINAWDEWKYVKPFCSNSDKDFVMACLYSAGKFKTDESLLAIESLLASPDTEISKEAFDAIANFKPAQVIPTLIR FKKTNPNHPNLADLSANLKKLKAAKQYAIINVSDRLNLRSKANERSEVITGLPGNAVVEIISREPRKYIITNSKGEEMED FWYQIKTSDGKKGYLFGEYIHVVDSY >Mature_346_residues MKKLLTILIFALSFQLYAGDLKDDLKSATGDSEKISILAEMGKSGETKYVKPVTEQLEKGESSKIRAQAATSLGDLKAGF NELHKAFDNDDVYVREASIEALAKIGNSKSQSYFEKGTKDKNEKIRFYSVQGLSKVGRSGNAPIFRNAIEWKDKPTQLAA IRGLGNINAWDEWKYVKPFCSNSDKDFVMACLYSAGKFKTDESLLAIESLLASPDTEISKEAFDAIANFKPAQVIPTLIR FKKTNPNHPNLADLSANLKKLKAAKQYAIINVSDRLNLRSKANERSEVITGLPGNAVVEIISREPRKYIITNSKGEEMED FWYQIKTSDGKKGYLFGEYIHVVDSY
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38594; Mature: 38594
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLTILIFALSFQLYAGDLKDDLKSATGDSEKISILAEMGKSGETKYVKPVTEQLEKG CHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEECHHHHHHHCC ESSKIRAQAATSLGDLKAGFNELHKAFDNDDVYVREASIEALAKIGNSKSQSYFEKGTKD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHCCCC KNEKIRFYSVQGLSKVGRSGNAPIFRNAIEWKDKPTQLAAIRGLGNINAWDEWKYVKPFC CCCCEEEEEECCHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCHHCHHH SNSDKDFVMACLYSAGKFKTDESLLAIESLLASPDTEISKEAFDAIANFKPAQVIPTLIR CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH FKKTNPNHPNLADLSANLKKLKAAKQYAIINVSDRLNLRSKANERSEVITGLPGNAVVEI HCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHCCCCHHHCCCHHHHEECCCCHHHHHH ISREPRKYIITNSKGEEMEDFWYQIKTSDGKKGYLFGEYIHVVDSY HHCCCCEEEEECCCCCHHHHHHEEEECCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MKKLLTILIFALSFQLYAGDLKDDLKSATGDSEKISILAEMGKSGETKYVKPVTEQLEKG CHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEECHHHHHHHCC ESSKIRAQAATSLGDLKAGFNELHKAFDNDDVYVREASIEALAKIGNSKSQSYFEKGTKD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHCCCC KNEKIRFYSVQGLSKVGRSGNAPIFRNAIEWKDKPTQLAAIRGLGNINAWDEWKYVKPFC CCCCEEEEEECCHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCHHCHHH SNSDKDFVMACLYSAGKFKTDESLLAIESLLASPDTEISKEAFDAIANFKPAQVIPTLIR CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH FKKTNPNHPNLADLSANLKKLKAAKQYAIINVSDRLNLRSKANERSEVITGLPGNAVVEI HCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEHHCCCCHHHCCCHHHHEECCCCHHHHHH ISREPRKYIITNSKGEEMEDFWYQIKTSDGKKGYLFGEYIHVVDSY HHCCCCEEEEECCCCCHHHHHHEEEECCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA