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The map label for this gene is dppB [H]

Identifier: 183219750

GI number: 183219750

Start: 325980

End: 326990

Strand: Direct

Name: dppB [H]

Synonym: LEPBI_I0326

Alternate gene names: 183219750

Gene position: 325980-326990 (Clockwise)

Preceding gene: 183219749

Following gene: 183219751

Centisome position: 9.06

GC content: 36.8

Gene sequence:

>1011_bases
ATGTGGAAATATTTTTTAAAGCGTTTTCTTCTAATTTTTCCAACCTTACTTGGAATCACGTTTTTAGTCTTTTTGATCTC
TCATTTTGCACCAGGTGGCCCACTCAATAGCGAAATTGCAAAACTGAAAGGATCGGCTAATTTAGCGGGTGCTTCCACCA
AACAAATCTCCCAAGAGGAAATTGAACTCATCAAAAAGAGACTCCATTTAGACAAACCTGCACCCATTGCCTATTTGTAT
TGGCTGAAACAAATTGTACAGTTTGATCTGGGTGAATCCCGACTCCATTCGCGAAAGGTTTCCGAACTCATCATTGAAAA
ACTACCTGTCTCACTTTTTTTCGGATTGTCAGGTTTTTTTCTGACTTACCTTATCTGTATTCCTTTGGGAATCCAAAAGG
CTTTAAAAGAAGGAAGTCGTTTTGATTTTATCACAAGTTTTATCATCTTTTTTACGTATTCCCTTCCAGTGTTTGCCTTT
GCGATGTTACTTTTATACTTATTTGCTTCTGGCGAGGTGTTTTCATTTTTTCCACTTGGGCATGAAGTTTCCGATTTTTA
TGAGGACTTAAGTTTTATTGGGAAAGTTAAAGACCGATTGGCACATATGTTTTTGCCTGTGATCTGTTATGTGGTCGGTA
GTTTTGCTGTTTTGACATTACTGATGAAAAATAGTTTGCTTGATCAAATTGCAAAAGAATATGTACGAACGGCACTCTCA
AAAGGATTAAGTTTTTCGGATGCTATCTTTCAACATGCTTTCCGAAATTCTCTCATACCGATCGCGACAGGATTTGGAAG
TAATTTAACTTTAATATTTTCTGGTTCACTTTTCATTGAGTTGGTATTCAATATTGATGGAATGGGACTTCTCAGTTTTG
AAGCTGTGCGCGAGAGGGATACTGACTTAATGATGGGCTTATTACTTGCACAAAGTTTTTTAGGACTCATTGGTAAAATT
GTCTCCGATTTTTGTTATATCATCATCGATCCGAGGATTGATTTCGAATGA

Upstream 100 bases:

>100_bases
GGCTGTGAAGGCAGACGATCCAATTCAAAAAAAGTCAGCCAAAGGATATTTAGAATTGAAAGGTTATCAAAAGTCGAAAG
ACTGGTGGGAGTTCTAAACC

Downstream 100 bases:

>100_bases
AGTTTATATCAAATCCAGCAAACGTTCGTAAGTGGGAAAAATTCAAAAAGAATAAACGTGCCTATTATTCTATGTTGGTA
CTATTTTATACATACCTACT

Product: ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MWKYFLKRFLLIFPTLLGITFLVFLISHFAPGGPLNSEIAKLKGSANLAGASTKQISQEEIELIKKRLHLDKPAPIAYLY
WLKQIVQFDLGESRLHSRKVSELIIEKLPVSLFFGLSGFFLTYLICIPLGIQKALKEGSRFDFITSFIIFFTYSLPVFAF
AMLLLYLFASGEVFSFFPLGHEVSDFYEDLSFIGKVKDRLAHMFLPVICYVVGSFAVLTLLMKNSLLDQIAKEYVRTALS
KGLSFSDAIFQHAFRNSLIPIATGFGSNLTLIFSGSLFIELVFNIDGMGLLSFEAVRERDTDLMMGLLLAQSFLGLIGKI
VSDFCYIIIDPRIDFE

Sequences:

>Translated_336_residues
MWKYFLKRFLLIFPTLLGITFLVFLISHFAPGGPLNSEIAKLKGSANLAGASTKQISQEEIELIKKRLHLDKPAPIAYLY
WLKQIVQFDLGESRLHSRKVSELIIEKLPVSLFFGLSGFFLTYLICIPLGIQKALKEGSRFDFITSFIIFFTYSLPVFAF
AMLLLYLFASGEVFSFFPLGHEVSDFYEDLSFIGKVKDRLAHMFLPVICYVVGSFAVLTLLMKNSLLDQIAKEYVRTALS
KGLSFSDAIFQHAFRNSLIPIATGFGSNLTLIFSGSLFIELVFNIDGMGLLSFEAVRERDTDLMMGLLLAQSFLGLIGKI
VSDFCYIIIDPRIDFE
>Mature_336_residues
MWKYFLKRFLLIFPTLLGITFLVFLISHFAPGGPLNSEIAKLKGSANLAGASTKQISQEEIELIKKRLHLDKPAPIAYLY
WLKQIVQFDLGESRLHSRKVSELIIEKLPVSLFFGLSGFFLTYLICIPLGIQKALKEGSRFDFITSFIIFFTYSLPVFAF
AMLLLYLFASGEVFSFFPLGHEVSDFYEDLSFIGKVKDRLAHMFLPVICYVVGSFAVLTLLMKNSLLDQIAKEYVRTALS
KGLSFSDAIFQHAFRNSLIPIATGFGSNLTLIFSGSLFIELVFNIDGMGLLSFEAVRERDTDLMMGLLLAQSFLGLIGKI
VSDFCYIIIDPRIDFE

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=38.9502762430939, Blast_Score=251, Evalue=4e-68,
Organism=Escherichia coli, GI1789965, Length=353, Percent_Identity=28.0453257790368, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1787497, Length=336, Percent_Identity=25.8928571428571, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1787053, Length=337, Percent_Identity=28.1899109792285, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1789888, Length=333, Percent_Identity=25.8258258258258, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787761, Length=346, Percent_Identity=26.3005780346821, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1787550, Length=271, Percent_Identity=23.2472324723247, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37913; Mature: 37913

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKYFLKRFLLIFPTLLGITFLVFLISHFAPGGPLNSEIAKLKGSANLAGASTKQISQEE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHH
IELIKKRLHLDKPAPIAYLYWLKQIVQFDLGESRLHSRKVSELIIEKLPVSLFFGLSGFF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTYLICIPLGIQKALKEGSRFDFITSFIIFFTYSLPVFAFAMLLLYLFASGEVFSFFPLG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
HEVSDFYEDLSFIGKVKDRLAHMFLPVICYVVGSFAVLTLLMKNSLLDQIAKEYVRTALS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLSFSDAIFQHAFRNSLIPIATGFGSNLTLIFSGSLFIELVFNIDGMGLLSFEAVRERD
CCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEECHHHHHHHHCCCCCCHHHHHHHHHCC
TDLMMGLLLAQSFLGLIGKIVSDFCYIIIDPRIDFE
HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
>Mature Secondary Structure
MWKYFLKRFLLIFPTLLGITFLVFLISHFAPGGPLNSEIAKLKGSANLAGASTKQISQEE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHH
IELIKKRLHLDKPAPIAYLYWLKQIVQFDLGESRLHSRKVSELIIEKLPVSLFFGLSGFF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTYLICIPLGIQKALKEGSRFDFITSFIIFFTYSLPVFAFAMLLLYLFASGEVFSFFPLG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
HEVSDFYEDLSFIGKVKDRLAHMFLPVICYVVGSFAVLTLLMKNSLLDQIAKEYVRTALS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLSFSDAIFQHAFRNSLIPIATGFGSNLTLIFSGSLFIELVFNIDGMGLLSFEAVRERD
CCCCHHHHHHHHHHHCCCCEEEECCCCCEEEEEECHHHHHHHHCCCCCCHHHHHHHHHCC
TDLMMGLLLAQSFLGLIGKIVSDFCYIIIDPRIDFE
HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]