| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219749
Identifier: 183219749
GI number: 183219749
Start: 325017
End: 325976
Strand: Direct
Name: 183219749
Synonym: LEPBI_I0325
Alternate gene names: NA
Gene position: 325017-325976 (Clockwise)
Preceding gene: 183219748
Following gene: 183219750
Centisome position: 9.03
GC content: 35.73
Gene sequence:
>960_bases TTGGAGTGGTGTTACTTTGTTGGTCATATCAAAGCTGAATCAGGAAATTTATATGGATATGAACTATCTTTTTTTCGATT GAAATTTTCTGATGGAGATAGTTGGAATCCAGAACTCTACCCAGTTCATTTTGCCATATCCGATCTTTCAAAAAAACGCC ATTACACTTCTCAAACCATCAAACGGAATTTAGGTGATCTTGCGGGAAATAAAGAGAATCGAATCTTTAGTGGAGAATAT GAATTCCAAATTCTTTCCAAAGATCAATTTTTTATCAAAGCAAAACCAAAATCAGGTGAAATTGCATTAGAGTTAAGTTT AGAGGGTAATGGAAACATTTTATCCCATGGAAAAGATGGAATTTCTATCAAATCAAAACGGAATCCAAAAATATTTTCAT ATTACTATAGTTATCCGAGACTTAAAACGAAAGGGTCTTTGTGGATCGAAGGGAAAAAAGAATCTATACTTTCTGGGGAT TCTTGGATGGATCACGAATGGAGTGAAAAAGCTTCTAAAAACATTCCAACTTTAGCAAAGGGTCAATCTGGTTGGGATTG GATTAGTTTGATGGATGACAAAGGTGGTGACTACGTTTTCTTTCGCTTTAGAGAATCATCCAAGGTAAGTCCTGAAATAT TTGGAACCTATCGTGATGTAAGGGGGAAAGTCACTTACTGGAGTGATGTATCAGAGATTCAAATGGAACCAATGGGAATA CCTTGGAAAAGTGAAAACACAAAAATTGAGTATCCTCTTCAATGGAAAATCAAATACCCTGGTGGAGAATGGATTGTATC TCCAATATTCAATGAACAAGAGTTTGATGGAAGTGATTCAACAAAAACCATCTATTGGGAAGGGGCTGTGAAGGCAGACG ATCCAATTCAAAAAAAGTCAGCCAAAGGATATTTAGAATTGAAAGGTTATCAAAAGTCGAAAGACTGGTGGGAGTTCTAA
Upstream 100 bases:
>100_bases GAGTCTTTGCCCAATGAAATCAATTAAAATTATCCTGCTTTCACTATGTTTTTTCCATTTTAGTTTTCCAAAAGACCACA ACTTCCATTCGGACTTTGGA
Downstream 100 bases:
>100_bases ACCATGTGGAAATATTTTTTAAAGCGTTTTCTTCTAATTTTTCCAACCTTACTTGGAATCACGTTTTTAGTCTTTTTGAT CTCTCATTTTGCACCAGGTG
Product: putative hydrolase
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MEWCYFVGHIKAESGNLYGYELSFFRLKFSDGDSWNPELYPVHFAISDLSKKRHYTSQTIKRNLGDLAGNKENRIFSGEY EFQILSKDQFFIKAKPKSGEIALELSLEGNGNILSHGKDGISIKSKRNPKIFSYYYSYPRLKTKGSLWIEGKKESILSGD SWMDHEWSEKASKNIPTLAKGQSGWDWISLMDDKGGDYVFFRFRESSKVSPEIFGTYRDVRGKVTYWSDVSEIQMEPMGI PWKSENTKIEYPLQWKIKYPGGEWIVSPIFNEQEFDGSDSTKTIYWEGAVKADDPIQKKSAKGYLELKGYQKSKDWWEF
Sequences:
>Translated_319_residues MEWCYFVGHIKAESGNLYGYELSFFRLKFSDGDSWNPELYPVHFAISDLSKKRHYTSQTIKRNLGDLAGNKENRIFSGEY EFQILSKDQFFIKAKPKSGEIALELSLEGNGNILSHGKDGISIKSKRNPKIFSYYYSYPRLKTKGSLWIEGKKESILSGD SWMDHEWSEKASKNIPTLAKGQSGWDWISLMDDKGGDYVFFRFRESSKVSPEIFGTYRDVRGKVTYWSDVSEIQMEPMGI PWKSENTKIEYPLQWKIKYPGGEWIVSPIFNEQEFDGSDSTKTIYWEGAVKADDPIQKKSAKGYLELKGYQKSKDWWEF >Mature_319_residues MEWCYFVGHIKAESGNLYGYELSFFRLKFSDGDSWNPELYPVHFAISDLSKKRHYTSQTIKRNLGDLAGNKENRIFSGEY EFQILSKDQFFIKAKPKSGEIALELSLEGNGNILSHGKDGISIKSKRNPKIFSYYYSYPRLKTKGSLWIEGKKESILSGD SWMDHEWSEKASKNIPTLAKGQSGWDWISLMDDKGGDYVFFRFRESSKVSPEIFGTYRDVRGKVTYWSDVSEIQMEPMGI PWKSENTKIEYPLQWKIKYPGGEWIVSPIFNEQEFDGSDSTKTIYWEGAVKADDPIQKKSAKGYLELKGYQKSKDWWEF
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37037; Mature: 37037
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWCYFVGHIKAESGNLYGYELSFFRLKFSDGDSWNPELYPVHFAISDLSKKRHYTSQTI CCEEEEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEEEHHHHHHHHHHHHHH KRNLGDLAGNKENRIFSGEYEFQILSKDQFFIKAKPKSGEIALELSLEGNGNILSHGKDG HHHHHHHCCCCCCCEECCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCC ISIKSKRNPKIFSYYYSYPRLKTKGSLWIEGKKESILSGDSWMDHEWSEKASKNIPTLAK EEEECCCCCEEEEEEECCCEEECCCCEEEECCCCCEECCCCCCCCCHHHHHHCCCCCEEC GQSGWDWISLMDDKGGDYVFFRFRESSKVSPEIFGTYRDVRGKVTYWSDVSEIQMEPMGI CCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHEEEHHHCCCEEEEECCCCCEEECCCCC PWKSENTKIEYPLQWKIKYPGGEWIVSPIFNEQEFDGSDSTKTIYWEGAVKADDPIQKKS CCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHC AKGYLELKGYQKSKDWWEF CCCEEEEECCCCCCCCCCC >Mature Secondary Structure MEWCYFVGHIKAESGNLYGYELSFFRLKFSDGDSWNPELYPVHFAISDLSKKRHYTSQTI CCEEEEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEEEHHHHHHHHHHHHHH KRNLGDLAGNKENRIFSGEYEFQILSKDQFFIKAKPKSGEIALELSLEGNGNILSHGKDG HHHHHHHCCCCCCCEECCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCC ISIKSKRNPKIFSYYYSYPRLKTKGSLWIEGKKESILSGDSWMDHEWSEKASKNIPTLAK EEEECCCCCEEEEEEECCCEEECCCCEEEECCCCCEECCCCCCCCCHHHHHHCCCCCEEC GQSGWDWISLMDDKGGDYVFFRFRESSKVSPEIFGTYRDVRGKVTYWSDVSEIQMEPMGI CCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHEEEHHHCCCEEEEECCCCCEEECCCCC PWKSENTKIEYPLQWKIKYPGGEWIVSPIFNEQEFDGSDSTKTIYWEGAVKADDPIQKKS CCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHC AKGYLELKGYQKSKDWWEF CCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA