| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219735
Identifier: 183219735
GI number: 183219735
Start: 310480
End: 311757
Strand: Direct
Name: 183219735
Synonym: LEPBI_I0311
Alternate gene names: NA
Gene position: 310480-311757 (Clockwise)
Preceding gene: 183219734
Following gene: 183219736
Centisome position: 8.63
GC content: 39.44
Gene sequence:
>1278_bases TTGCGTTCTAAATTTTTAGGCATCGGACTCGCTCTTTTGTTTTTTTTGGTTTTGGAAATCACAGTCCGTGTGACAGGCAT TCATTATTTGGAACAACCTGAAATCTTCTTTGTGAATCTCAAGAAAAACTATGTGGAATCGGGAACGGGAGATGCCGACA TACTTGTATTAGGCGATTCACGTTCCATGGCTCTTTCTGGCTATTCTAAAGACGAGAACACAGAATACTCCGTTTACAAT CATAGTTTGCCAGCGATGGGACCCAAATACTACCGTTTCTTTTTGGAGAAGTATCTAACAAAAGGAAACAAAAAACCAAA AATGGTTCTTTTTGCCGCATCACCCAAGTTATATGCAACGGGTTATGGTCCACCTTTGTATGATCCAGATGCCAAAGTTG TGAAAGAAAATGAATCCATTCCTACTTACATCAACCGTCGTTGGAACGAGGGATTCGAAAAAAATTTTTTTAGGACCCAA ACGAAATCCAATGTGATTCGTTATAGTGGCAAACAAGAGGACGCCAACCAAATCCTTTGGGAATTTTTTGGCCATCGGTA TCTCCACCAATTTACTTTCTCTGAATTATCCGAACAGTACACTGGTGTGGAACGATTGTTTATTTTATCTAAAGCAACTC CACTCTTGTATCATTCTTACCGATTCCACGGTGCCATACGGAATGCACTCAGCCAATCCAATTGGAAAGTGGACAAACAA TACAAAGAAAAATCCATCTTCTGTGAATCTTGCGAAAACATTGAAGCAGGTTTGTGCAAACCATCCTCATCTCAACTCGA AGACAATCTCACGATCGAAGACCAAATCAATCGTCATTTTGGGAAATATAATATTTCCAATCGTTTGAAACCAGAGTTAG TCCTTTTTTCCAAACAGCTGATCCGAAAAGAATTGGATGAGGAATTAAAACATCCCAATTTGAATTTTGATCCAAATCCA GATTTTGTCGTATTAGAAGATTTGATCACCTACGCAAAAGAAAAAGGCATTCCCTTTGGGATGGTATACATGCCGTGGAT GAAAGAACGCCAAGAATCCCCTGAGTCAAAGGCCTTACTTTCCAAGTTAATCATTTTTTTCCAAAACCACCCCGATACCA AACTCTTTTTCTTTCCCGATTCTTCCTACCCTGCAGAGCGTTTTGTAGATAATATCCATTACGATTGCCGAGGGGAAAAA CGGGTAAACGAAGAATTCCGCCAATTTGTCCTTCCCCAGGTCTTTCGTTTTTTATCTTCTAAACAAAAATCCAATTGA
Upstream 100 bases:
>100_bases TGGTTGTTTTTAACACATCCACTCATCCAAGCAGTTGTTTTATCTTTTATGGCATTTCTCATCCTCACCAGAGGAGTTTT TGGAAAAGAGGTAATTTACT
Downstream 100 bases:
>100_bases TTTCCGATTTCGAGTATTGGAGAATGAGGCACTCCATCCGGATAAGAGGAAACCCAATCATGTTTTCGTTACGAAACATA TTTGTTTGTATTCTATCTGC
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MRSKFLGIGLALLFFLVLEITVRVTGIHYLEQPEIFFVNLKKNYVESGTGDADILVLGDSRSMALSGYSKDENTEYSVYN HSLPAMGPKYYRFFLEKYLTKGNKKPKMVLFAASPKLYATGYGPPLYDPDAKVVKENESIPTYINRRWNEGFEKNFFRTQ TKSNVIRYSGKQEDANQILWEFFGHRYLHQFTFSELSEQYTGVERLFILSKATPLLYHSYRFHGAIRNALSQSNWKVDKQ YKEKSIFCESCENIEAGLCKPSSSQLEDNLTIEDQINRHFGKYNISNRLKPELVLFSKQLIRKELDEELKHPNLNFDPNP DFVVLEDLITYAKEKGIPFGMVYMPWMKERQESPESKALLSKLIIFFQNHPDTKLFFFPDSSYPAERFVDNIHYDCRGEK RVNEEFRQFVLPQVFRFLSSKQKSN
Sequences:
>Translated_425_residues MRSKFLGIGLALLFFLVLEITVRVTGIHYLEQPEIFFVNLKKNYVESGTGDADILVLGDSRSMALSGYSKDENTEYSVYN HSLPAMGPKYYRFFLEKYLTKGNKKPKMVLFAASPKLYATGYGPPLYDPDAKVVKENESIPTYINRRWNEGFEKNFFRTQ TKSNVIRYSGKQEDANQILWEFFGHRYLHQFTFSELSEQYTGVERLFILSKATPLLYHSYRFHGAIRNALSQSNWKVDKQ YKEKSIFCESCENIEAGLCKPSSSQLEDNLTIEDQINRHFGKYNISNRLKPELVLFSKQLIRKELDEELKHPNLNFDPNP DFVVLEDLITYAKEKGIPFGMVYMPWMKERQESPESKALLSKLIIFFQNHPDTKLFFFPDSSYPAERFVDNIHYDCRGEK RVNEEFRQFVLPQVFRFLSSKQKSN >Mature_425_residues MRSKFLGIGLALLFFLVLEITVRVTGIHYLEQPEIFFVNLKKNYVESGTGDADILVLGDSRSMALSGYSKDENTEYSVYN HSLPAMGPKYYRFFLEKYLTKGNKKPKMVLFAASPKLYATGYGPPLYDPDAKVVKENESIPTYINRRWNEGFEKNFFRTQ TKSNVIRYSGKQEDANQILWEFFGHRYLHQFTFSELSEQYTGVERLFILSKATPLLYHSYRFHGAIRNALSQSNWKVDKQ YKEKSIFCESCENIEAGLCKPSSSQLEDNLTIEDQINRHFGKYNISNRLKPELVLFSKQLIRKELDEELKHPNLNFDPNP DFVVLEDLITYAKEKGIPFGMVYMPWMKERQESPESKALLSKLIIFFQNHPDTKLFFFPDSSYPAERFVDNIHYDCRGEK RVNEEFRQFVLPQVFRFLSSKQKSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49762; Mature: 49762
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSKFLGIGLALLFFLVLEITVRVTGIHYLEQPEIFFVNLKKNYVESGTGDADILVLGDS CCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEHHHHCCCCCCEEEEEEECC RSMALSGYSKDENTEYSVYNHSLPAMGPKYYRFFLEKYLTKGNKKPKMVLFAASPKLYAT CCEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEE GYGPPLYDPDAKVVKENESIPTYINRRWNEGFEKNFFRTQTKSNVIRYSGKQEDANQILW CCCCCCCCCCHHHEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHH EFFGHRYLHQFTFSELSEQYTGVERLFILSKATPLLYHSYRFHGAIRNALSQSNWKVDKQ HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH YKEKSIFCESCENIEAGLCKPSSSQLEDNLTIEDQINRHFGKYNISNRLKPELVLFSKQL HHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH IRKELDEELKHPNLNFDPNPDFVVLEDLITYAKEKGIPFGMVYMPWMKERQESPESKALL HHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEECCHHHHHHCCCHHHHHH SKLIIFFQNHPDTKLFFFPDSSYPAERFVDNIHYDCRGEKRVNEEFRQFVLPQVFRFLSS HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KQKSN HCCCC >Mature Secondary Structure MRSKFLGIGLALLFFLVLEITVRVTGIHYLEQPEIFFVNLKKNYVESGTGDADILVLGDS CCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEHHHHCCCCCCEEEEEEECC RSMALSGYSKDENTEYSVYNHSLPAMGPKYYRFFLEKYLTKGNKKPKMVLFAASPKLYAT CCEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEE GYGPPLYDPDAKVVKENESIPTYINRRWNEGFEKNFFRTQTKSNVIRYSGKQEDANQILW CCCCCCCCCCHHHEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHH EFFGHRYLHQFTFSELSEQYTGVERLFILSKATPLLYHSYRFHGAIRNALSQSNWKVDKQ HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH YKEKSIFCESCENIEAGLCKPSSSQLEDNLTIEDQINRHFGKYNISNRLKPELVLFSKQL HHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH IRKELDEELKHPNLNFDPNPDFVVLEDLITYAKEKGIPFGMVYMPWMKERQESPESKALL HHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHCCCCEEEEECCHHHHHHCCCHHHHHH SKLIIFFQNHPDTKLFFFPDSSYPAERFVDNIHYDCRGEKRVNEEFRQFVLPQVFRFLSS HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KQKSN HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA