| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219711
Identifier: 183219711
GI number: 183219711
Start: 281399
End: 282310
Strand: Direct
Name: 183219711
Synonym: LEPBI_I0287
Alternate gene names: NA
Gene position: 281399-282310 (Clockwise)
Preceding gene: 183219710
Following gene: 183219718
Centisome position: 7.82
GC content: 39.36
Gene sequence:
>912_bases ATGAGTTTGATTGAGGTCGCGAAATCGGGGAGTATCGATGAGTGGGATTTGTGTTTAAAAGAAGGAGAAGATCCCAATGG ATTGGATACGTATGGAACCAATGCCCTTTCCTGGATGTTAAAAGTAGACAATGTAAATTTGTTCCGACATGCGATCCTAA CCGGTGCTGATCCGAATTCCCCATACCGAACTCCTGGCAATGTGATTTTTGATGTGATCAGTCAAAATCGAACTCAGTTT ATGGACGCACTAATAACAACAGCGACTCATTGGAAATCTTCACCTAACATTCAAACGCGAGACAAAGACGGAAATACAAT TTATCACTTGTCTGTTTTGGAATCTTGCGAACCGCTCTGGGAAGTTCTCCATGAACAGATCACTGATGATATTATTTCCT TAAGAAATGAAAGCGGTCGTTCGCTTTTTTTAGAAGCCATCATTGAAAATCGAATCGAAATTCTATCCTATTTACTCAAA ACATTCCCCCAAGTGAAAGACCATTCTGACAGCGAAGGCAAAAATGCCCTTCATTTAGCAGCGGAACGTAATTTAGATGA AGTATGTTCCATACTTCTGGAAGAAGGAACGATCGACCTAGAAACTAGAGATAACTATGGTAATACGGCATTATTTTTAT CAGCTTCTTCTGACGGAGTTGAGTCAATGAAGGAACTTCTCTATGCGGGTGCCAATCCATTTGTTTGGGGTGAAAATGAT GAATCCATTTCTCGGTTACTGGATAGAGAAAAATTTGGACATTGTCTGAAAACTTGGAAAGACTATGTGATCCAAAAAGC GATCTTAGGAGAAGTGTATTCCTTCAGAAAAGAAATGATCCAATACATCCAACAAGAAAAACCTTTCAAACCAGAAGAGC TCGCCAAAGCAAAGTTAGTAGATTTGATTTAA
Upstream 100 bases:
>100_bases TTGAAGTGAAACGTGGATTTGACAAAACAATTGCCTTCAAACCCACTAAACGTGTTGTTAAAAAATCGACAACGACAAGG AAACAATTATCGTAACAAGA
Downstream 100 bases:
>100_bases ATCTGAATTAAAGGAATACACAACTCACTATTTTTGAGGAGTTGCATCATTGCCTATAAATTTTGGTCCATAATTTCCCT CTCGGTCGGTATGGTTTCGT
Product: ankyrin repeat-containing protein
Products: NA
Alternate protein names: Ankyrin-Like Protein
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSLIEVAKSGSIDEWDLCLKEGEDPNGLDTYGTNALSWMLKVDNVNLFRHAILTGADPNSPYRTPGNVIFDVISQNRTQF MDALITTATHWKSSPNIQTRDKDGNTIYHLSVLESCEPLWEVLHEQITDDIISLRNESGRSLFLEAIIENRIEILSYLLK TFPQVKDHSDSEGKNALHLAAERNLDEVCSILLEEGTIDLETRDNYGNTALFLSASSDGVESMKELLYAGANPFVWGEND ESISRLLDREKFGHCLKTWKDYVIQKAILGEVYSFRKEMIQYIQQEKPFKPEELAKAKLVDLI
Sequences:
>Translated_303_residues MSLIEVAKSGSIDEWDLCLKEGEDPNGLDTYGTNALSWMLKVDNVNLFRHAILTGADPNSPYRTPGNVIFDVISQNRTQF MDALITTATHWKSSPNIQTRDKDGNTIYHLSVLESCEPLWEVLHEQITDDIISLRNESGRSLFLEAIIENRIEILSYLLK TFPQVKDHSDSEGKNALHLAAERNLDEVCSILLEEGTIDLETRDNYGNTALFLSASSDGVESMKELLYAGANPFVWGEND ESISRLLDREKFGHCLKTWKDYVIQKAILGEVYSFRKEMIQYIQQEKPFKPEELAKAKLVDLI >Mature_302_residues SLIEVAKSGSIDEWDLCLKEGEDPNGLDTYGTNALSWMLKVDNVNLFRHAILTGADPNSPYRTPGNVIFDVISQNRTQFM DALITTATHWKSSPNIQTRDKDGNTIYHLSVLESCEPLWEVLHEQITDDIISLRNESGRSLFLEAIIENRIEILSYLLKT FPQVKDHSDSEGKNALHLAAERNLDEVCSILLEEGTIDLETRDNYGNTALFLSASSDGVESMKELLYAGANPFVWGENDE SISRLLDREKFGHCLKTWKDYVIQKAILGEVYSFRKEMIQYIQQEKPFKPEELAKAKLVDLI
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI193209259, Length=135, Percent_Identity=34.0740740740741, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34390; Mature: 34259
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIEVAKSGSIDEWDLCLKEGEDPNGLDTYGTNALSWMLKVDNVNLFRHAILTGADPNS CCHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHEEEEEECCHHHHHHHHHCCCCCCC PYRTPGNVIFDVISQNRTQFMDALITTATHWKSSPNIQTRDKDGNTIYHLSVLESCEPLW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH EVLHEQITDDIISLRNESGRSLFLEAIIENRIEILSYLLKTFPQVKDHSDSEGKNALHLA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEHH AERNLDEVCSILLEEGTIDLETRDNYGNTALFLSASSDGVESMKELLYAGANPFVWGEND HHCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEECCCH ESISRLLDREKFGHCLKTWKDYVIQKAILGEVYSFRKEMIQYIQQEKPFKPEELAKAKLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH DLI HCC >Mature Secondary Structure SLIEVAKSGSIDEWDLCLKEGEDPNGLDTYGTNALSWMLKVDNVNLFRHAILTGADPNS CHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHEEEEEECCHHHHHHHHHCCCCCCC PYRTPGNVIFDVISQNRTQFMDALITTATHWKSSPNIQTRDKDGNTIYHLSVLESCEPLW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHH EVLHEQITDDIISLRNESGRSLFLEAIIENRIEILSYLLKTFPQVKDHSDSEGKNALHLA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEHH AERNLDEVCSILLEEGTIDLETRDNYGNTALFLSASSDGVESMKELLYAGANPFVWGEND HHCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEECCCH ESISRLLDREKFGHCLKTWKDYVIQKAILGEVYSFRKEMIQYIQQEKPFKPEELAKAKLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH DLI HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA