| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219626
Identifier: 183219626
GI number: 183219626
Start: 194674
End: 196170
Strand: Reverse
Name: 183219626
Synonym: LEPBI_I0201
Alternate gene names: NA
Gene position: 196170-194674 (Counterclockwise)
Preceding gene: 183219627
Following gene: 183219625
Centisome position: 5.45
GC content: 43.42
Gene sequence:
>1497_bases ATGAAATCGCATCTAAATTCTTTTTTATTTGCGCTTTTATGCCCATTCGGAATGTTCTTTTCATTTTTATTGGAAGCGGA TCCAACAAAAGACCCTTTCGAATCCTTACATGGGCCAAACATCTATTCGCAAGATTATATCAACCAACAACCTGGAGTTC TCACTCTTTCTGAACTTTTAAAGTCAGTAGAAAAATCCTATCCCCTTGTTCTTGCAGCAGAGAAACTATTAACTGAAACT GAATACAATTATTTGGCCGCCGAAGGTGCGTTTGATTTACAATTCAAATCCATGGGAACAACAAAACCCATAGGTTACTA TACAAACAATGCTGCAGATACAGTGTTTGAAAAACCAACTCCACTCGGAGGAACTTCCTTCTTTGCAGGATATCGCATAG GACGTGGGAAATTTCCAGTGTATGATGGCAAACGCGAAACCAATGATTATGGGGAGGTGAGAGCTGGTGCGATTGTTCCC CTGATGCGTAACCGTGAGATTGATAAAAACAGAGCCGACCTTCGGAAGGCAGACATTGATCGTAAACTTGCCGAGTTATC CATCCAAAAACTAAAAATTGAAGTCATCAAAGAAGCCACCAAACGGTATTGGAAATGGGTCGCGAGTGGACAGGAGTTTC TCGTCAACAAAGACCTGTTAGAGATAGCAAAAAGTAGACAACAACAAATTACCCAACGAATCAAGTTAGGTGACATTCCT AAAATGGAAGGCACAGAAAATGACCGTGCGATTTTACAAAGGGAATCCCAATTTGTTTCTGCAGAACGTGAGATGCAAAA AGCCGCAATTGATTTGTCCTTATTCCTTCGGGCGGCTGATGGGAATTTGATCCTTCCCTCTACCGATCGGTTGCCCATCG GATTTCCAAAACCCATCGACTATAAAGGTTTGGAACTCGACAAAAGCATTAAAATTGCATGGAAGTTTCGTCCCGAAATC CAAGACTACGAATTCAAACGGGAAAAGGCACGCGTAGACCAAGACATGGGATACAATTCACTCAAACCCCAAGTGGATCT CGTGGTGGCAGGATCACAAGACTTTGGACCAGGTTCTGTCACGAGGGCCAAACCAGAACTGGAAGCATCCCTTGTTCTCA ATGTACCCATCCAAACGAGGCGGCCTCGTGGGATGATTGGAGCGGCAGAAGCAAGAATCGCACAACTTGACCAAGAACTC CAATTCTCAAAAGATAAAATCAAAACAGAAGTACAGGATGCCATCTCAGAAGTGATTGCTTCGGCAAAACGTGTGACTGT CACTCAAAGTGAAGTGGAACTAGCCCGTAAATTGGAGGAGATGGAACGAGAACGTTTTTCCTTAGGGGATTCGACTCTCT TATTTGTGAATATTCGGGAACAAACAAGTGCCGAAGCGGCGGTGCGTGAAATTAAGGCATTGTACGATCATCACGTAGCT GTTGCCAACTTCCAAGCATCCACTGCTACATTCTTACAAAATTCTCCCACTCCATAG
Upstream 100 bases:
>100_bases AATTATGGAGAAGGTTCAATGACTTCCCACCAAATTTGCCAATGGATGATCCTGAAATGAAATCGTTGTTAGATGAGAAT GGTGGAGGAGACAAAGGAAA
Downstream 100 bases:
>100_bases TCGTAAATCTTCTGTAGAAAAAAAAACGACTTTCACATCTCAAGGAATTCCTAAACTTTTCCCTAAAGAAGGTATCTATG CACGGGGAAGAGTCACTTTT
Product: putative signal peptide
Products: NA
Alternate protein names: Outer Membrane Component Of Multidrug Efflux Pump; Outer Membrane Protein-Like Protein; Outer Membrane Protein; Outer Membrane Protein-Like; Signal Peptide; Multidrug Efflux Protein Outer Membrane Component
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MKSHLNSFLFALLCPFGMFFSFLLEADPTKDPFESLHGPNIYSQDYINQQPGVLTLSELLKSVEKSYPLVLAAEKLLTET EYNYLAAEGAFDLQFKSMGTTKPIGYYTNNAADTVFEKPTPLGGTSFFAGYRIGRGKFPVYDGKRETNDYGEVRAGAIVP LMRNREIDKNRADLRKADIDRKLAELSIQKLKIEVIKEATKRYWKWVASGQEFLVNKDLLEIAKSRQQQITQRIKLGDIP KMEGTENDRAILQRESQFVSAEREMQKAAIDLSLFLRAADGNLILPSTDRLPIGFPKPIDYKGLELDKSIKIAWKFRPEI QDYEFKREKARVDQDMGYNSLKPQVDLVVAGSQDFGPGSVTRAKPELEASLVLNVPIQTRRPRGMIGAAEARIAQLDQEL QFSKDKIKTEVQDAISEVIASAKRVTVTQSEVELARKLEEMERERFSLGDSTLLFVNIREQTSAEAAVREIKALYDHHVA VANFQASTATFLQNSPTP
Sequences:
>Translated_498_residues MKSHLNSFLFALLCPFGMFFSFLLEADPTKDPFESLHGPNIYSQDYINQQPGVLTLSELLKSVEKSYPLVLAAEKLLTET EYNYLAAEGAFDLQFKSMGTTKPIGYYTNNAADTVFEKPTPLGGTSFFAGYRIGRGKFPVYDGKRETNDYGEVRAGAIVP LMRNREIDKNRADLRKADIDRKLAELSIQKLKIEVIKEATKRYWKWVASGQEFLVNKDLLEIAKSRQQQITQRIKLGDIP KMEGTENDRAILQRESQFVSAEREMQKAAIDLSLFLRAADGNLILPSTDRLPIGFPKPIDYKGLELDKSIKIAWKFRPEI QDYEFKREKARVDQDMGYNSLKPQVDLVVAGSQDFGPGSVTRAKPELEASLVLNVPIQTRRPRGMIGAAEARIAQLDQEL QFSKDKIKTEVQDAISEVIASAKRVTVTQSEVELARKLEEMERERFSLGDSTLLFVNIREQTSAEAAVREIKALYDHHVA VANFQASTATFLQNSPTP >Mature_498_residues MKSHLNSFLFALLCPFGMFFSFLLEADPTKDPFESLHGPNIYSQDYINQQPGVLTLSELLKSVEKSYPLVLAAEKLLTET EYNYLAAEGAFDLQFKSMGTTKPIGYYTNNAADTVFEKPTPLGGTSFFAGYRIGRGKFPVYDGKRETNDYGEVRAGAIVP LMRNREIDKNRADLRKADIDRKLAELSIQKLKIEVIKEATKRYWKWVASGQEFLVNKDLLEIAKSRQQQITQRIKLGDIP KMEGTENDRAILQRESQFVSAEREMQKAAIDLSLFLRAADGNLILPSTDRLPIGFPKPIDYKGLELDKSIKIAWKFRPEI QDYEFKREKARVDQDMGYNSLKPQVDLVVAGSQDFGPGSVTRAKPELEASLVLNVPIQTRRPRGMIGAAEARIAQLDQEL QFSKDKIKTEVQDAISEVIASAKRVTVTQSEVELARKLEEMERERFSLGDSTLLFVNIREQTSAEAAVREIKALYDHHVA VANFQASTATFLQNSPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56178; Mature: 56178
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSHLNSFLFALLCPFGMFFSFLLEADPTKDPFESLHGPNIYSQDYINQQPGVLTLSELL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHCCCCCCEEHHHHHH KSVEKSYPLVLAAEKLLTETEYNYLAAEGAFDLQFKSMGTTKPIGYYTNNAADTVFEKPT HHHHHCCCEEEEHHHHHHHHCCCEEEECCCEEEEEECCCCCCCCCEECCCCHHHHHCCCC PLGGTSFFAGYRIGRGKFPVYDGKRETNDYGEVRAGAIVPLMRNREIDKNRADLRKADID CCCCCHHHHCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCHHHHHHHHHH RKLAELSIQKLKIEVIKEATKRYWKWVASGQEFLVNKDLLEIAKSRQQQITQRIKLGDIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KMEGTENDRAILQRESQFVSAEREMQKAAIDLSLFLRAADGNLILPSTDRLPIGFPKPID CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEECCCCCCCCCCCCCCCC YKGLELDKSIKIAWKFRPEIQDYEFKREKARVDQDMGYNSLKPQVDLVVAGSQDFGPGSV CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCC TRAKPELEASLVLNVPIQTRRPRGMIGAAEARIAQLDQELQFSKDKIKTEVQDAISEVIA CCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAKRVTVTQSEVELARKLEEMERERFSLGDSTLLFVNIREQTSAEAAVREIKALYDHHVA HHHHEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCEE VANFQASTATFLQNSPTP EEECCCHHHHHHCCCCCC >Mature Secondary Structure MKSHLNSFLFALLCPFGMFFSFLLEADPTKDPFESLHGPNIYSQDYINQQPGVLTLSELL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHCCCCCCEEHHHHHH KSVEKSYPLVLAAEKLLTETEYNYLAAEGAFDLQFKSMGTTKPIGYYTNNAADTVFEKPT HHHHHCCCEEEEHHHHHHHHCCCEEEECCCEEEEEECCCCCCCCCEECCCCHHHHHCCCC PLGGTSFFAGYRIGRGKFPVYDGKRETNDYGEVRAGAIVPLMRNREIDKNRADLRKADID CCCCCHHHHCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCHHHHHHHHHH RKLAELSIQKLKIEVIKEATKRYWKWVASGQEFLVNKDLLEIAKSRQQQITQRIKLGDIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KMEGTENDRAILQRESQFVSAEREMQKAAIDLSLFLRAADGNLILPSTDRLPIGFPKPID CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEECCCCCCCCCCCCCCCC YKGLELDKSIKIAWKFRPEIQDYEFKREKARVDQDMGYNSLKPQVDLVVAGSQDFGPGSV CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCC TRAKPELEASLVLNVPIQTRRPRGMIGAAEARIAQLDQELQFSKDKIKTEVQDAISEVIA CCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAKRVTVTQSEVELARKLEEMERERFSLGDSTLLFVNIREQTSAEAAVREIKALYDHHVA HHHHEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCEE VANFQASTATFLQNSPTP EEECCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA