Click here to switch to the map view.

The map label for this gene is 183219627

Identifier: 183219627

GI number: 183219627

Start: 196167

End: 197516

Strand: Reverse

Name: 183219627

Synonym: LEPBI_I0202

Alternate gene names: NA

Gene position: 197516-196167 (Counterclockwise)

Preceding gene: 183219628

Following gene: 183219626

Centisome position: 5.49

GC content: 45.26

Gene sequence:

>1350_bases
ATGAACACTAATATGTCACCAAAATGGAAACTTCGTAAAAACCTACCTTCTTACCGGTTGGTGCAAACAGCACTTCCTGC
ACAAAGTTTAGCCTACATCCTCACCATAATATTTTTCTTAAGTGTTCTCATTTTACTCTATGTGCCTTGGCAACAAACTA
CGATGGGTTTTGGACGAGTGGTTGCTTATGCACCACTTGACCGCCAACAAGTGATTGAGTCTCCTATCAGTGGACGTGTT
GTCAAATGGCATGTCCACGAAGGGACACGTGTTAAAAAGGGAGATCCGATCATTGATATCTCAGACAATGATCCTAATTT
TATCAACCGGATTCGTGAAGAAAAAAATGCCCTCTTACAACGATTAGAGGCTGCTAGGTCTAGAGAAGACAACATTCGTT
CTAGGATATTAAGTTTACGTTCTTCCATGGGAAGTGCGGTGAATGCTGCTGACTCTCGCAGGATGATGGCAAAAGATCGA
GTGCGAGCCAGCGAACAGGCAGTAGATGCTGCAAAAGCTGCCCTCAAAACTGCCAATTTGAATTTAGACCGTCAAAAACA
ATTATGGGAAAAAGGACTCACTTCCAAACGAACTTTGGAACTAGCGGAACTGGACCATACCAATGCTGAGACAGGCCTTG
ACCGAGCCAAAGCAGCCTACGATGCGGCCGTGAAAGAAGAACGTGCGTTGAATAGTGATACGGGAAAGGTGCAACAAGAT
GCGGAAGCATCCATCAATGATGCCAAGGCTTCCCTTGCTTCCGCTCAATCCGAAGTGGCAAGGGTCTTAGAAGACCTACC
CAAATTAGAAGCGCGACTTTCGAGACAAGAAAACCAAGAAATCTTTGCGCCAAGAGATGGGATCATCATGCGAATCCTCG
TGAACCCAGATACCCAACAAGTAAAGGAAGGGGATGGAGTTGCCATCTTAGTACCGGATGCTGAAGACAAAGCAGTGGAA
CTTTTTATCTCAGGCAATGACATACCACTCGTTGGCGAAGGACGAAAGGTTCGTTTACAATTCCAAGGTTACCCTGTTTT
ACAAATCAGTGGTTGGCCAGAAACTGCTGTAGGAACCTTCGGTGGGGTAGTGAAACTGGTTGACATCACAGACAATGGAT
CTGGAAATTTCCGTGTTCTCGTTGTCCCTGACCGAGATGACCGCCAATGGCCTTCTAGCCGTTACTTGAGACAAGGGGTT
CGTGCCAAAGGTTGGATCTTTCTCAATCGTGTGAGTGTTGGTTATGAATTATGGAGAAGGTTCAATGACTTCCCACCAAA
TTTGCCAATGGATGATCCTGAAATGAAATCGTTGTTAGATGAGAATGGTGGAGGAGACAAAGGAAAATGA

Upstream 100 bases:

>100_bases
TTTCATTGTGTCCAAGTCACCAACCATCCTTGGGCAAATGGACCAAATCTTAAAGTTGGAAGATGATTCTCATTCATTAA
AGGTGAATCCATAAACAACT

Downstream 100 bases:

>100_bases
AATCGCATCTAAATTCTTTTTTATTTGCGCTTTTATGCCCATTCGGAATGTTCTTTTCATTTTTATTGGAAGCGGATCCA
ACAAAAGACCCTTTCGAATC

Product: putative signal peptide

Products: NA

Alternate protein names: Secretion Protein HlyD; Secretion Protein HlyD Family Protein; Outer Membrane Efflux Protein; Multidrug Resistance Efflux Pump-Like Protein; HlyD Family Secretion Protein; Membrane Fusion Protein; Efflux Transporter Membrane Fusion Protein; Signal Peptide; Xin Secretion Protein; ABC Transporter Membrane Fusion Efflux Protein; Secretion Protein; RND Efflux Membrane Fusion Proteins; Biotin/Lipoyl Attachment Domain-Containing Protein; Multidrug Resistance Efflux Pump

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MNTNMSPKWKLRKNLPSYRLVQTALPAQSLAYILTIIFFLSVLILLYVPWQQTTMGFGRVVAYAPLDRQQVIESPISGRV
VKWHVHEGTRVKKGDPIIDISDNDPNFINRIREEKNALLQRLEAARSREDNIRSRILSLRSSMGSAVNAADSRRMMAKDR
VRASEQAVDAAKAALKTANLNLDRQKQLWEKGLTSKRTLELAELDHTNAETGLDRAKAAYDAAVKEERALNSDTGKVQQD
AEASINDAKASLASAQSEVARVLEDLPKLEARLSRQENQEIFAPRDGIIMRILVNPDTQQVKEGDGVAILVPDAEDKAVE
LFISGNDIPLVGEGRKVRLQFQGYPVLQISGWPETAVGTFGGVVKLVDITDNGSGNFRVLVVPDRDDRQWPSSRYLRQGV
RAKGWIFLNRVSVGYELWRRFNDFPPNLPMDDPEMKSLLDENGGGDKGK

Sequences:

>Translated_449_residues
MNTNMSPKWKLRKNLPSYRLVQTALPAQSLAYILTIIFFLSVLILLYVPWQQTTMGFGRVVAYAPLDRQQVIESPISGRV
VKWHVHEGTRVKKGDPIIDISDNDPNFINRIREEKNALLQRLEAARSREDNIRSRILSLRSSMGSAVNAADSRRMMAKDR
VRASEQAVDAAKAALKTANLNLDRQKQLWEKGLTSKRTLELAELDHTNAETGLDRAKAAYDAAVKEERALNSDTGKVQQD
AEASINDAKASLASAQSEVARVLEDLPKLEARLSRQENQEIFAPRDGIIMRILVNPDTQQVKEGDGVAILVPDAEDKAVE
LFISGNDIPLVGEGRKVRLQFQGYPVLQISGWPETAVGTFGGVVKLVDITDNGSGNFRVLVVPDRDDRQWPSSRYLRQGV
RAKGWIFLNRVSVGYELWRRFNDFPPNLPMDDPEMKSLLDENGGGDKGK
>Mature_449_residues
MNTNMSPKWKLRKNLPSYRLVQTALPAQSLAYILTIIFFLSVLILLYVPWQQTTMGFGRVVAYAPLDRQQVIESPISGRV
VKWHVHEGTRVKKGDPIIDISDNDPNFINRIREEKNALLQRLEAARSREDNIRSRILSLRSSMGSAVNAADSRRMMAKDR
VRASEQAVDAAKAALKTANLNLDRQKQLWEKGLTSKRTLELAELDHTNAETGLDRAKAAYDAAVKEERALNSDTGKVQQD
AEASINDAKASLASAQSEVARVLEDLPKLEARLSRQENQEIFAPRDGIIMRILVNPDTQQVKEGDGVAILVPDAEDKAVE
LFISGNDIPLVGEGRKVRLQFQGYPVLQISGWPETAVGTFGGVVKLVDITDNGSGNFRVLVVPDRDDRQWPSSRYLRQGV
RAKGWIFLNRVSVGYELWRRFNDFPPNLPMDDPEMKSLLDENGGGDKGK

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50196; Mature: 50196

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNMSPKWKLRKNLPSYRLVQTALPAQSLAYILTIIFFLSVLILLYVPWQQTTMGFGRV
CCCCCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCE
VAYAPLDRQQVIESPISGRVVKWHVHEGTRVKKGDPIIDISDNDPNFINRIREEKNALLQ
EEECCCCHHHHHCCCCCCCEEEEEECCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHH
RLEAARSREDNIRSRILSLRSSMGSAVNAADSRRMMAKDRVRASEQAVDAAKAALKTANL
HHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NLDRQKQLWEKGLTSKRTLELAELDHTNAETGLDRAKAAYDAAVKEERALNSDTGKVQQD
CCHHHHHHHHHCCCCHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
AEASINDAKASLASAQSEVARVLEDLPKLEARLSRQENQEIFAPRDGIIMRILVNPDTQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCHHH
VKEGDGVAILVPDAEDKAVELFISGNDIPLVGEGRKVRLQFQGYPVLQISGWPETAVGTF
HHCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCEEEEEECCEEEEEECCCCCHHHHHC
GGVVKLVDITDNGSGNFRVLVVPDRDDRQWPSSRYLRQGVRAKGWIFLNRVSVGYELWRR
CCEEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCEEEEEEHHHHHHHHHH
FNDFPPNLPMDDPEMKSLLDENGGGDKGK
HCCCCCCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNTNMSPKWKLRKNLPSYRLVQTALPAQSLAYILTIIFFLSVLILLYVPWQQTTMGFGRV
CCCCCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCE
VAYAPLDRQQVIESPISGRVVKWHVHEGTRVKKGDPIIDISDNDPNFINRIREEKNALLQ
EEECCCCHHHHHCCCCCCCEEEEEECCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHH
RLEAARSREDNIRSRILSLRSSMGSAVNAADSRRMMAKDRVRASEQAVDAAKAALKTANL
HHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NLDRQKQLWEKGLTSKRTLELAELDHTNAETGLDRAKAAYDAAVKEERALNSDTGKVQQD
CCHHHHHHHHHCCCCHHEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
AEASINDAKASLASAQSEVARVLEDLPKLEARLSRQENQEIFAPRDGIIMRILVNPDTQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCHHH
VKEGDGVAILVPDAEDKAVELFISGNDIPLVGEGRKVRLQFQGYPVLQISGWPETAVGTF
HHCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCEEEEEECCEEEEEECCCCCHHHHHC
GGVVKLVDITDNGSGNFRVLVVPDRDDRQWPSSRYLRQGVRAKGWIFLNRVSVGYELWRR
CCEEEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCEEEEEEHHHHHHHHHH
FNDFPPNLPMDDPEMKSLLDENGGGDKGK
HCCCCCCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA