Click here to switch to the map view.

The map label for this gene is 183219609

Identifier: 183219609

GI number: 183219609

Start: 178710

End: 180221

Strand: Reverse

Name: 183219609

Synonym: LEPBI_I0184

Alternate gene names: NA

Gene position: 180221-178710 (Counterclockwise)

Preceding gene: 183219610

Following gene: 183219608

Centisome position: 5.01

GC content: 33.8

Gene sequence:

>1512_bases
TTGGATCATATCCATCGCCGCCTCTCTACTGTCTTTGAAAAAAACCAAATCGTATTTTTGATTCCAGAATCTGATGAGGA
ATCCATTCAATTTTTAAATTCACGAGGTTACCTTTATTTCTGCGGTTCCGAATTGGATGTCAGAGATAGATTCCGAAAGG
CTAGCAAACATTTTGGGGCAGAACACATATTTCGGCTAACAGCTGATAATCCATTTATTGATATAGATTCCATTCGGTAT
CTATATGAGGCCGTTTTAGAAATTAAAGATACTTATTATAGTTTATCAATGCTAGGCCTTCCTCTGGGAATGGGAGTAGA
ATGTTTTTCTGCAGAGTCCTTGTTTTACGAGTCAGATAGTACAAATTTGGAACGGCACAAGGAACATGTTTCGTTGCATA
TAAAAGAATTTCCAGATATCCATAAACAATATCGTCTTTCTCCTCCTCATTTACAACGAAACGATTCAATGTTTCAAAAA
CAGTTTAAAGAAATTTCTAAACTTCGGATTACCGTAGATGAATGGAAAGATTATCAATTGATTTGTAATATTTGGAACAC
TTTAGGAGATAAGAATCCTAACTTTGGAGCAGATGAGGTATACCTACTATTCCAAACCAATCCAAATTTATTTGATATCA
ATGCCAATGTGGAGCAAGTGATTTTTGATTTACCTAAAAATGAAAATTTAAAGAAACAAGTGAACATTCTTTATGGGAAC
CCGAGTTTTTATGGATACGGACATTTTGAACGCTGTAAGTCTTTATCTATTTTTTTACAAATCAATGGATATGCAGTCAA
ATTGATGGATCATTTTGATGAAAAAGAATCAGAAATTCCGCATATATTGGATCTAAGAGAAACAGAATTTCCAATTCAAA
ATACGTTTTACATCGATAACCTTAACCATCCACCTAACAATCTAAACGCTATTTTTTTTCTACCCCATCCTTCTCATCCG
ATTAAAAATCAGAATTTACTTTCTTATTTCAGTTCGCCACTATCAGAACTCAAAAGTAATCAAAAAGAAATCCCAGGTAA
ACTTTTAGTTTATGCTGGACAATTGGAAGAAAAACAATCAGAACAAATTGACAACTACCTATTACCATTCCTTAACACTT
CTAATGATTCCCAAACTCCCATATTCCAATTTGTACTTCGAATTGGTGGAACCAAACCAAAGGATCCAAATATCAACTTT
ATCCCTAGGATTTCGTATCTGGAATTTTTGAGAGAAATGGACTCATCCGAATGGATATTGACTTATTTTGGGCAAACGAT
GATGGAAGCCGTTGTGAAAGGCAAAAAAGTATCATTGATTGGAATCTCAGAAATCCATGATACTTTAGGTCGTTATGCAG
AAAAAGAATTAGGCATCCCTTATGTTGGTAAGTTATCAGATCTTTCTAAAATTGAAACGTTTCCGAACAAAACGGAAACA
AAGAAAATCAATTATGTTCGCGATGCCCATAAACAAATCTTAAATTGGTTAAATACCATTGTTCCAAATTGA

Upstream 100 bases:

>100_bases
AACGCATAATAGTTTTGCCTTCATCCAGGCAAGACTTGGCTCCACAAGATTTCCTAAAAAAATTCTAAAACCAATACCAG
AAGGTTCTAATTCTACATTT

Downstream 100 bases:

>100_bases
TATGAAAAAAACTCAAACCTTTCTACTGTTTTTCCTGTTACTTTTCCTTTCACTAGTTTCCATTTCTGCAGATGCAGAAG
ACCAGGAATCGATTGAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MDHIHRRLSTVFEKNQIVFLIPESDEESIQFLNSRGYLYFCGSELDVRDRFRKASKHFGAEHIFRLTADNPFIDIDSIRY
LYEAVLEIKDTYYSLSMLGLPLGMGVECFSAESLFYESDSTNLERHKEHVSLHIKEFPDIHKQYRLSPPHLQRNDSMFQK
QFKEISKLRITVDEWKDYQLICNIWNTLGDKNPNFGADEVYLLFQTNPNLFDINANVEQVIFDLPKNENLKKQVNILYGN
PSFYGYGHFERCKSLSIFLQINGYAVKLMDHFDEKESEIPHILDLRETEFPIQNTFYIDNLNHPPNNLNAIFFLPHPSHP
IKNQNLLSYFSSPLSELKSNQKEIPGKLLVYAGQLEEKQSEQIDNYLLPFLNTSNDSQTPIFQFVLRIGGTKPKDPNINF
IPRISYLEFLREMDSSEWILTYFGQTMMEAVVKGKKVSLIGISEIHDTLGRYAEKELGIPYVGKLSDLSKIETFPNKTET
KKINYVRDAHKQILNWLNTIVPN

Sequences:

>Translated_503_residues
MDHIHRRLSTVFEKNQIVFLIPESDEESIQFLNSRGYLYFCGSELDVRDRFRKASKHFGAEHIFRLTADNPFIDIDSIRY
LYEAVLEIKDTYYSLSMLGLPLGMGVECFSAESLFYESDSTNLERHKEHVSLHIKEFPDIHKQYRLSPPHLQRNDSMFQK
QFKEISKLRITVDEWKDYQLICNIWNTLGDKNPNFGADEVYLLFQTNPNLFDINANVEQVIFDLPKNENLKKQVNILYGN
PSFYGYGHFERCKSLSIFLQINGYAVKLMDHFDEKESEIPHILDLRETEFPIQNTFYIDNLNHPPNNLNAIFFLPHPSHP
IKNQNLLSYFSSPLSELKSNQKEIPGKLLVYAGQLEEKQSEQIDNYLLPFLNTSNDSQTPIFQFVLRIGGTKPKDPNINF
IPRISYLEFLREMDSSEWILTYFGQTMMEAVVKGKKVSLIGISEIHDTLGRYAEKELGIPYVGKLSDLSKIETFPNKTET
KKINYVRDAHKQILNWLNTIVPN
>Mature_503_residues
MDHIHRRLSTVFEKNQIVFLIPESDEESIQFLNSRGYLYFCGSELDVRDRFRKASKHFGAEHIFRLTADNPFIDIDSIRY
LYEAVLEIKDTYYSLSMLGLPLGMGVECFSAESLFYESDSTNLERHKEHVSLHIKEFPDIHKQYRLSPPHLQRNDSMFQK
QFKEISKLRITVDEWKDYQLICNIWNTLGDKNPNFGADEVYLLFQTNPNLFDINANVEQVIFDLPKNENLKKQVNILYGN
PSFYGYGHFERCKSLSIFLQINGYAVKLMDHFDEKESEIPHILDLRETEFPIQNTFYIDNLNHPPNNLNAIFFLPHPSHP
IKNQNLLSYFSSPLSELKSNQKEIPGKLLVYAGQLEEKQSEQIDNYLLPFLNTSNDSQTPIFQFVLRIGGTKPKDPNINF
IPRISYLEFLREMDSSEWILTYFGQTMMEAVVKGKKVSLIGISEIHDTLGRYAEKELGIPYVGKLSDLSKIETFPNKTET
KKINYVRDAHKQILNWLNTIVPN

Specific function: Unknown

COG id: COG1861

COG function: function code M; Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003329 [H]

Pfam domain/function: PF02348 CTP_transf_3 [H]

EC number: NA

Molecular weight: Translated: 58694; Mature: 58694

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHIHRRLSTVFEKNQIVFLIPESDEESIQFLNSRGYLYFCGSELDVRDRFRKASKHFGA
CCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCC
EHIFRLTADNPFIDIDSIRYLYEAVLEIKDTYYSLSMLGLPLGMGVECFSAESLFYESDS
HHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCC
TNLERHKEHVSLHIKEFPDIHKQYRLSPPHLQRNDSMFQKQFKEISKLRITVDEWKDYQL
CCHHHHHHHHEEEEHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEHHHCCCHHH
ICNIWNTLGDKNPNFGADEVYLLFQTNPNLFDINANVEQVIFDLPKNENLKKQVNILYGN
HHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEECCCHHHHHEECCCCCCCCEEEEEEECC
PSFYGYGHFERCKSLSIFLQINGYAVKLMDHFDEKESEIPHILDLRETEFPIQNTFYIDN
CCCCCCCHHHHCCCEEEEEEECCEEEEEEHHCCCHHHCCCCEECCCCCCCCCCCEEEEEC
LNHPPNNLNAIFFLPHPSHPIKNQNLLSYFSSPLSELKSNQKEIPGKLLVYAGQLEEKQS
CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEEECCHHHHHH
EQIDNYLLPFLNTSNDSQTPIFQFVLRIGGTKPKDPNINFIPRISYLEFLREMDSSEWIL
HHHHHHCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCHH
TYFGQTMMEAVVKGKKVSLIGISEIHDTLGRYAEKELGIPYVGKLSDLSKIETFPNKTET
HHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHH
KKINYVRDAHKQILNWLNTIVPN
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDHIHRRLSTVFEKNQIVFLIPESDEESIQFLNSRGYLYFCGSELDVRDRFRKASKHFGA
CCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCC
EHIFRLTADNPFIDIDSIRYLYEAVLEIKDTYYSLSMLGLPLGMGVECFSAESLFYESDS
HHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCC
TNLERHKEHVSLHIKEFPDIHKQYRLSPPHLQRNDSMFQKQFKEISKLRITVDEWKDYQL
CCHHHHHHHHEEEEHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEHHHCCCHHH
ICNIWNTLGDKNPNFGADEVYLLFQTNPNLFDINANVEQVIFDLPKNENLKKQVNILYGN
HHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEECCCHHHHHEECCCCCCCCEEEEEEECC
PSFYGYGHFERCKSLSIFLQINGYAVKLMDHFDEKESEIPHILDLRETEFPIQNTFYIDN
CCCCCCCHHHHCCCEEEEEEECCEEEEEEHHCCCHHHCCCCEECCCCCCCCCCCEEEEEC
LNHPPNNLNAIFFLPHPSHPIKNQNLLSYFSSPLSELKSNQKEIPGKLLVYAGQLEEKQS
CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEEECCHHHHHH
EQIDNYLLPFLNTSNDSQTPIFQFVLRIGGTKPKDPNINFIPRISYLEFLREMDSSEWIL
HHHHHHCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCHH
TYFGQTMMEAVVKGKKVSLIGISEIHDTLGRYAEKELGIPYVGKLSDLSKIETFPNKTET
HHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHH
KKINYVRDAHKQILNWLNTIVPN
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]