| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219610
Identifier: 183219610
GI number: 183219610
Start: 180313
End: 181863
Strand: Reverse
Name: 183219610
Synonym: LEPBI_I0185
Alternate gene names: NA
Gene position: 181863-180313 (Counterclockwise)
Preceding gene: 183219611
Following gene: 183219609
Centisome position: 5.05
GC content: 34.24
Gene sequence:
>1551_bases ATGACAAACCGTAAGGAATATCATCCCAGTTTCGCGGTTGTTTATTTAGACAGCCCAACGCTTACATTTTTAGAATCAAA TTTTGATGTGAATCTTGTTGATTCGTTTCTTAAAAAACTACATAAAGTATTTCCAAATATTAACATTCATATGAATGTTT CGAAGCCAATAAAATCAATGTTAGAGGCTGGATCACAAACAAAGTTTTTTGAATTTTACGAATCCATACCTTCTGAAATT GAATTCATCAAACAAATTGGAAGTTTGCTTCCTGAATCTGTATTCAAAGATCCAGAATGGGATGAAGTTTGTTTTTTATA TTTTACCGGTATTTCTCCAATCTTAGATCCTAAACTTACAGAAAAAATTTGGAACCGTCATAAAAACTTTTTTAGCCAAT ATTCTTATTCTGAAAATATTCCACCAGGACTCATTCCCACCGTCATCACTAGAGAATTTTTAACTTCGTTGCCAGACCAT CTAACAACCGATATTCACTCATTTTTTCTAAAGAATATCAATCAATACGATGTGGATATTTTTTTCCAATCTCCTGATCT GCGCCAATTACGATTGGATTTCCGTTTCAATTCCCCTCGTTCGAAAATGCTCATCCAAGGGTTACAAAAAATTGCGGAGG ATGTTCCTTATGAGAACCTACTTTCAATTTTAAAACAAAACCCTGAATTGTATCGCAGTTTCCCATCATATTTAGAGTGG GAGATTTATAAAGGATGCGAGCTCGCCTGTGTATTTTGTCCACGCGAGTTTATAGATAAATCAAATGATGGAAGTTTTGT ATCGTTAGATGTTACAAAACAAATTATCAATCGATTCCAGAATGAATTAACCTCTCCTATCACCATTAGTTTGTCAGGAA ATGGGGAACCACTTTTACATCCAAATTTTGTTGCCATAGTCAAAGAAATTCTCACACTTTCCCAACTCAAAGAACTCATC ATTGAAACAGCTTTGTACAAAAATGTGGATCAGTTGTTTTCTCTCATCAATGATTTGGACCCAAAACTCAAAGAAAAACT TTGTATCATAACCAATGTAACCACATTAAAAGAAGATACATACCAATCTTTGTATGGAAAAAATGAACTATCTCAAGTAT TAGAATCAATTGACTCACTTTCGAAGATCCTTCCTCAAAATTCTCTTTATGTTCAAATGATTAAAATGAAAGAAGTGGAA GATGAAATTGATCCTTACTTTACTTTTTTTGAGAAAAAAGGGATTCAAATCATCTTACAAAAATACAATCGTTTTGCTGG GAAGTTGCCTGAACGAAGAGTGAGTGACCTTACACCGATTCATAGAGATTTTTGTTGGCACCTAATTCGTGATATTTACC TTTCCGTATCTGGTGAAGTTTCTATTTGCAAACAAAACCAGACAGAAATGATCGGTAATCTTCTCTCTGAGTCTTTGTCT GAAGTTTGGAAAAAAGGATTGGATTCGTTTCGCCATAGTTTCAACGGTGAACATGATTTAATCCCCGCTCCGTGTTTGAA TTGTGATGAGTGGTACACCTTCAACGCATAA
Upstream 100 bases:
>100_bases TCGTTGCCACTCGAAAAAATACATCCATTACCATCTTTGATCCAATTTATATCAAAGAACACAATATCAGTAACCCAGAA GAGAAGTACAATTCAGATTA
Downstream 100 bases:
>100_bases TAGTTTTGCCTTCATCCAGGCAAGACTTGGCTCCACAAGATTTCCTAAAAAAATTCTAAAACCAATACCAGAAGGTTCTA ATTCTACATTTTTGGATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MTNRKEYHPSFAVVYLDSPTLTFLESNFDVNLVDSFLKKLHKVFPNINIHMNVSKPIKSMLEAGSQTKFFEFYESIPSEI EFIKQIGSLLPESVFKDPEWDEVCFLYFTGISPILDPKLTEKIWNRHKNFFSQYSYSENIPPGLIPTVITREFLTSLPDH LTTDIHSFFLKNINQYDVDIFFQSPDLRQLRLDFRFNSPRSKMLIQGLQKIAEDVPYENLLSILKQNPELYRSFPSYLEW EIYKGCELACVFCPREFIDKSNDGSFVSLDVTKQIINRFQNELTSPITISLSGNGEPLLHPNFVAIVKEILTLSQLKELI IETALYKNVDQLFSLINDLDPKLKEKLCIITNVTTLKEDTYQSLYGKNELSQVLESIDSLSKILPQNSLYVQMIKMKEVE DEIDPYFTFFEKKGIQIILQKYNRFAGKLPERRVSDLTPIHRDFCWHLIRDIYLSVSGEVSICKQNQTEMIGNLLSESLS EVWKKGLDSFRHSFNGEHDLIPAPCLNCDEWYTFNA
Sequences:
>Translated_516_residues MTNRKEYHPSFAVVYLDSPTLTFLESNFDVNLVDSFLKKLHKVFPNINIHMNVSKPIKSMLEAGSQTKFFEFYESIPSEI EFIKQIGSLLPESVFKDPEWDEVCFLYFTGISPILDPKLTEKIWNRHKNFFSQYSYSENIPPGLIPTVITREFLTSLPDH LTTDIHSFFLKNINQYDVDIFFQSPDLRQLRLDFRFNSPRSKMLIQGLQKIAEDVPYENLLSILKQNPELYRSFPSYLEW EIYKGCELACVFCPREFIDKSNDGSFVSLDVTKQIINRFQNELTSPITISLSGNGEPLLHPNFVAIVKEILTLSQLKELI IETALYKNVDQLFSLINDLDPKLKEKLCIITNVTTLKEDTYQSLYGKNELSQVLESIDSLSKILPQNSLYVQMIKMKEVE DEIDPYFTFFEKKGIQIILQKYNRFAGKLPERRVSDLTPIHRDFCWHLIRDIYLSVSGEVSICKQNQTEMIGNLLSESLS EVWKKGLDSFRHSFNGEHDLIPAPCLNCDEWYTFNA >Mature_515_residues TNRKEYHPSFAVVYLDSPTLTFLESNFDVNLVDSFLKKLHKVFPNINIHMNVSKPIKSMLEAGSQTKFFEFYESIPSEIE FIKQIGSLLPESVFKDPEWDEVCFLYFTGISPILDPKLTEKIWNRHKNFFSQYSYSENIPPGLIPTVITREFLTSLPDHL TTDIHSFFLKNINQYDVDIFFQSPDLRQLRLDFRFNSPRSKMLIQGLQKIAEDVPYENLLSILKQNPELYRSFPSYLEWE IYKGCELACVFCPREFIDKSNDGSFVSLDVTKQIINRFQNELTSPITISLSGNGEPLLHPNFVAIVKEILTLSQLKELII ETALYKNVDQLFSLINDLDPKLKEKLCIITNVTTLKEDTYQSLYGKNELSQVLESIDSLSKILPQNSLYVQMIKMKEVED EIDPYFTFFEKKGIQIILQKYNRFAGKLPERRVSDLTPIHRDFCWHLIRDIYLSVSGEVSICKQNQTEMIGNLLSESLSE VWKKGLDSFRHSFNGEHDLIPAPCLNCDEWYTFNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60021; Mature: 59890
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRKEYHPSFAVVYLDSPTLTFLESNFDVNLVDSFLKKLHKVFPNINIHMNVSKPIKSM CCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH LEAGSQTKFFEFYESIPSEIEFIKQIGSLLPESVFKDPEWDEVCFLYFTGISPILDPKLT HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCHHCCHHHH EKIWNRHKNFFSQYSYSENIPPGLIPTVITREFLTSLPDHLTTDIHSFFLKNINQYDVDI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEE FFQSPDLRQLRLDFRFNSPRSKMLIQGLQKIAEDVPYENLLSILKQNPELYRSFPSYLEW EECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCHHHHCC EIYKGCELACVFCPREFIDKSNDGSFVSLDVTKQIINRFQNELTSPITISLSGNGEPLLH HHCCCCCEEEEECCHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC PNFVAIVKEILTLSQLKELIIETALYKNVDQLFSLINDLDPKLKEKLCIITNVTTLKEDT CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHCEEHEECCHHHHHHH YQSLYGKNELSQVLESIDSLSKILPQNSLYVQMIKMKEVEDEIDPYFTFFEKKGIQIILQ HHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH KYNRFAGKLPERRVSDLTPIHRDFCWHLIRDIYLSVSGEVSICKQNQTEMIGNLLSESLS HHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHH EVWKKGLDSFRHSFNGEHDLIPAPCLNCDEWYTFNA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure TNRKEYHPSFAVVYLDSPTLTFLESNFDVNLVDSFLKKLHKVFPNINIHMNVSKPIKSM CCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH LEAGSQTKFFEFYESIPSEIEFIKQIGSLLPESVFKDPEWDEVCFLYFTGISPILDPKLT HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCHHCCHHHH EKIWNRHKNFFSQYSYSENIPPGLIPTVITREFLTSLPDHLTTDIHSFFLKNINQYDVDI HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEE FFQSPDLRQLRLDFRFNSPRSKMLIQGLQKIAEDVPYENLLSILKQNPELYRSFPSYLEW EECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCHHHHCC EIYKGCELACVFCPREFIDKSNDGSFVSLDVTKQIINRFQNELTSPITISLSGNGEPLLH HHCCCCCEEEEECCHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC PNFVAIVKEILTLSQLKELIIETALYKNVDQLFSLINDLDPKLKEKLCIITNVTTLKEDT CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHCEEHEECCHHHHHHH YQSLYGKNELSQVLESIDSLSKILPQNSLYVQMIKMKEVEDEIDPYFTFFEKKGIQIILQ HHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH KYNRFAGKLPERRVSDLTPIHRDFCWHLIRDIYLSVSGEVSICKQNQTEMIGNLLSESLS HHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHH EVWKKGLDSFRHSFNGEHDLIPAPCLNCDEWYTFNA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]