| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680568
Identifier: 182680568
GI number: 182680568
Start: 4165047
End: 4166153
Strand: Reverse
Name: 182680568
Synonym: Bind_3673
Alternate gene names: NA
Gene position: 4166153-4165047 (Counterclockwise)
Preceding gene: 182680570
Following gene: 182680567
Centisome position: 99.9
GC content: 61.97
Gene sequence:
>1107_bases ATGCCCGCGCCACCGCGTGGGCCGGGTGTGAGCCTCATCCGCCCAGTCTGCGGTCTTGAGACCTTTTCGCAGGAAACCCT GGCCTCGAGCTTTCGCCTCACCTATCCAACCTATGAATTGATCTTCTGCGTCGCGCGGGCGGGAGATCCGGTCGTCAAAC TGGTCGAACGGCTCATCGCGGCCCATCCCCATGTGCCGGCACGGCTCGTGATCGGCGACGAAAAGGTCTGCGAAAACCCC AAATTAAACAATTGCGTCCGGGGCTGCGACTCGGCTCAATTCGACTGGATCATTCTCGCTGATTCCAATGTCTTGATGCC GCAGGACTATATCCAGCAATTGCTGGCCGCCTGGCGGCAAAAATCCGGACTCGTCTGTTCCATGCCGCTCGGCTCGCGCC CCCATAATGTCTGGGCGGAATTCGAATGCGCCTTCCTCAATACCTATGAGGCCCGCTGGCAATTCACGGGCGAGGCCCTC GGAGCCGGCTTCGCGCAAGGCAAGACCATGCTCTGGCGGCGCGACATTCTGGAGGCCGGCGGCGGCATCCGCGCCTTGGG CCGTGAAATCGCCGAAGATGCCGCCGGCACGAAGCTCGTGCGGGCGCAGGGCCGCAAGATCCACCTCGTCGACGCCCCCT TCGAGCAGCCGCTCGGGCTGCGTTCGCTCCGCGACGTCTGGAACCGGCAGGTCCGCTGGGCCAGGATGCGGCGCAAAACC TTTCCTCTTTATTTTCTCCCTGAAGTCTTTTCCGGCGGTGCCTTGCCTTTGGCCTTCGGCCTTCTAGCGGCGGTGCTCGG CGATTATAATGTGCCGGCCGTCATGGCCGCCCTGTTTCTCCTCTGGTATGGGCCGGAAAGTCTGCTCGCCCTGCACAAGC ACTGGCCTTTCACCTGGCGTTCCCCCTTTTTGTTCCTGCTGCGCGATTTCTCCCTGCCAGCCATCTATGCCCTCGCCTGG TGCGGCGATCGTTTCGTCTGGCACGGCAATGCCATGGATATGCGCGCGCAACATGCGGTTCCAAACGGATCGGGCCTTCA GGAGAGGGCCGACTGTTGCCAGGAGAATGCCGCCGATTTCGTTGAATCAACCTCCCACTCGTCATAG
Upstream 100 bases:
>100_bases ATATTGCCCTTGCGGCGGGGTTGTTCTGCCTCGCTTTGACCGTGATGAATCTCATCAGCCTTTCATCGCCCTGATTCGTA TCCGTCCGCCGCAGAGCCCC
Downstream 100 bases:
>100_bases AACCAGACTGTAAAACAGTTTTCGTCTGAGGGACGAGGAGAAGGCGATGCGGATGCGTGGGATGGGTGATGTCTGATCGT CAAGGGCCGCCGCACGCGCA
Product: ceramide glucosyltransferase
Products: UDP; D-glucosyl-N-acylsphingosine
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Putatiave Glycosyltransferase; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MPAPPRGPGVSLIRPVCGLETFSQETLASSFRLTYPTYELIFCVARAGDPVVKLVERLIAAHPHVPARLVIGDEKVCENP KLNNCVRGCDSAQFDWIILADSNVLMPQDYIQQLLAAWRQKSGLVCSMPLGSRPHNVWAEFECAFLNTYEARWQFTGEAL GAGFAQGKTMLWRRDILEAGGGIRALGREIAEDAAGTKLVRAQGRKIHLVDAPFEQPLGLRSLRDVWNRQVRWARMRRKT FPLYFLPEVFSGGALPLAFGLLAAVLGDYNVPAVMAALFLLWYGPESLLALHKHWPFTWRSPFLFLLRDFSLPAIYALAW CGDRFVWHGNAMDMRAQHAVPNGSGLQERADCCQENAADFVESTSHSS
Sequences:
>Translated_368_residues MPAPPRGPGVSLIRPVCGLETFSQETLASSFRLTYPTYELIFCVARAGDPVVKLVERLIAAHPHVPARLVIGDEKVCENP KLNNCVRGCDSAQFDWIILADSNVLMPQDYIQQLLAAWRQKSGLVCSMPLGSRPHNVWAEFECAFLNTYEARWQFTGEAL GAGFAQGKTMLWRRDILEAGGGIRALGREIAEDAAGTKLVRAQGRKIHLVDAPFEQPLGLRSLRDVWNRQVRWARMRRKT FPLYFLPEVFSGGALPLAFGLLAAVLGDYNVPAVMAALFLLWYGPESLLALHKHWPFTWRSPFLFLLRDFSLPAIYALAW CGDRFVWHGNAMDMRAQHAVPNGSGLQERADCCQENAADFVESTSHSS >Mature_367_residues PAPPRGPGVSLIRPVCGLETFSQETLASSFRLTYPTYELIFCVARAGDPVVKLVERLIAAHPHVPARLVIGDEKVCENPK LNNCVRGCDSAQFDWIILADSNVLMPQDYIQQLLAAWRQKSGLVCSMPLGSRPHNVWAEFECAFLNTYEARWQFTGEALG AGFAQGKTMLWRRDILEAGGGIRALGREIAEDAAGTKLVRAQGRKIHLVDAPFEQPLGLRSLRDVWNRQVRWARMRRKTF PLYFLPEVFSGGALPLAFGLLAAVLGDYNVPAVMAALFLLWYGPESLLALHKHWPFTWRSPFLFLLRDFSLPAIYALAWC GDRFVWHGNAMDMRAQHAVPNGSGLQERADCCQENAADFVESTSHSS
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4507811, Length=244, Percent_Identity=30.327868852459, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI32566973, Length=342, Percent_Identity=28.6549707602339, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI25147526, Length=339, Percent_Identity=24.4837758112094, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI25149577, Length=338, Percent_Identity=26.9230769230769, Blast_Score=118, Evalue=5e-27, Organism=Caenorhabditis elegans, GI25149574, Length=338, Percent_Identity=26.9230769230769, Blast_Score=118, Evalue=6e-27, Organism=Caenorhabditis elegans, GI32564728, Length=338, Percent_Identity=26.9230769230769, Blast_Score=118, Evalue=6e-27, Organism=Caenorhabditis elegans, GI25149580, Length=243, Percent_Identity=28.8065843621399, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI24657569, Length=244, Percent_Identity=34.0163934426229, Blast_Score=154, Evalue=9e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.80
Molecular weight: Translated: 41084; Mature: 40953
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPPRGPGVSLIRPVCGLETFSQETLASSFRLTYPTYELIFCVARAGDPVVKLVERLIA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCHHHHHHHHHHH AHPHVPARLVIGDEKVCENPKLNNCVRGCDSAQFDWIILADSNVLMPQDYIQQLLAAWRQ CCCCCCEEEEECCHHHCCCCCHHHHHHCCCCCCCCEEEEECCCEECCHHHHHHHHHHHHH KSGLVCSMPLGSRPHNVWAEFECAFLNTYEARWQFTGEALGAGFAQGKTMLWRRDILEAG CCCCEEECCCCCCCCCCHHEEEEEEEECHHHHEEECHHHHCCCHHCCCHHHHHHHHHHCC GGIRALGREIAEDAAGTKLVRAQGRKIHLVDAPFEQPLGLRSLRDVWNRQVRWARMRRKT CCHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC FPLYFLPEVFSGGALPLAFGLLAAVLGDYNVPAVMAALFLLWYGPESLLALHKHWPFTWR CCEEECHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC SPFLFLLRDFSLPAIYALAWCGDRFVWHGNAMDMRAQHAVPNGSGLQERADCCQENAADF CHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH VESTSHSS HHHCCCCC >Mature Secondary Structure PAPPRGPGVSLIRPVCGLETFSQETLASSFRLTYPTYELIFCVARAGDPVVKLVERLIA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCHHHHHHHHHHH AHPHVPARLVIGDEKVCENPKLNNCVRGCDSAQFDWIILADSNVLMPQDYIQQLLAAWRQ CCCCCCEEEEECCHHHCCCCCHHHHHHCCCCCCCCEEEEECCCEECCHHHHHHHHHHHHH KSGLVCSMPLGSRPHNVWAEFECAFLNTYEARWQFTGEALGAGFAQGKTMLWRRDILEAG CCCCEEECCCCCCCCCCHHEEEEEEEECHHHHEEECHHHHCCCHHCCCHHHHHHHHHHCC GGIRALGREIAEDAAGTKLVRAQGRKIHLVDAPFEQPLGLRSLRDVWNRQVRWARMRRKT CCHHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC FPLYFLPEVFSGGALPLAFGLLAAVLGDYNVPAVMAALFLLWYGPESLLALHKHWPFTWR CCEEECHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC SPFLFLLRDFSLPAIYALAWCGDRFVWHGNAMDMRAQHAVPNGSGLQERADCCQENAADF CHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHH VESTSHSS HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-glucose; N-acylsphingosine
Specific reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA