| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is nudG [H]
Identifier: 182680553
GI number: 182680553
Start: 4147455
End: 4147862
Strand: Reverse
Name: nudG [H]
Synonym: Bind_3658
Alternate gene names: 182680553
Gene position: 4147862-4147455 (Counterclockwise)
Preceding gene: 182680554
Following gene: 182680551
Centisome position: 99.47
GC content: 64.22
Gene sequence:
>408_bases GTGAGTCAGTCTCTGCTTCTCGTTGTCGCCGTGGCGCTGGTCGATCAGGATATGCGCGTGCTGATCGCCCAGCGCCCTCC CGGCAAAACCCTCGCCGGCCTTTGGGAATTTCCCGGCGGCAAGGTCGAGCCGGGAGAAAGCCCCGAGGCGGCCCTAATCC GTGAGCTCACCGAGGAATTGGGTATTACGGTCGCCGAACCTTGCCTCGCGCCCCTGACCTTCGCCAGCCACGCCTATGAG CATTTTCATCTCCTGATGCCGCTCTATATCTGCCGGCGCTGGCAAGGCTTCGTCAGCCCGCGCGAGGGGCAGACTCTGAA ATGGGTCGCGCCGCGTGCACTGCGCGACTATCCCATGCCGCCCGCCGACGAGCCTCTCATTTCCGCCCTGCTCGATCTTC TGGCGTGA
Upstream 100 bases:
>100_bases TCGATATTCGCGTCGATCTCGGGCTCGGCGAGGGAAGCGCCCGGCTCTGGACCTGCGACCTCACCAAAGCCTATGTCGAA ATCAATGGTGATTACCGCTC
Downstream 100 bases:
>100_bases ACCCGATGGAGGCTCAAGCCTCCATCGAAATGATCACCTTCAAGGCTTGTGTACTGGCCGCCTGACCGAAGGTTTCATAG GCATCAAGGATCTGATCCAG
Product: mutator MutT protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSQSLLLVVAVALVDQDMRVLIAQRPPGKTLAGLWEFPGGKVEPGESPEAALIRELTEELGITVAEPCLAPLTFASHAYE HFHLLMPLYICRRWQGFVSPREGQTLKWVAPRALRDYPMPPADEPLISALLDLLA
Sequences:
>Translated_135_residues MSQSLLLVVAVALVDQDMRVLIAQRPPGKTLAGLWEFPGGKVEPGESPEAALIRELTEELGITVAEPCLAPLTFASHAYE HFHLLMPLYICRRWQGFVSPREGQTLKWVAPRALRDYPMPPADEPLISALLDLLA >Mature_134_residues SQSLLLVVAVALVDQDMRVLIAQRPPGKTLAGLWEFPGGKVEPGESPEAALIRELTEELGITVAEPCLAPLTFASHAYEH FHLLMPLYICRRWQGFVSPREGQTLKWVAPRALRDYPMPPADEPLISALLDLLA
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=134, Percent_Identity=41.7910447761194, Blast_Score=91, Evalue=2e-20, Organism=Escherichia coli, GI1786288, Length=130, Percent_Identity=36.1538461538462, Blast_Score=79, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.-
Molecular weight: Translated: 14926; Mature: 14794
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSLLLVVAVALVDQDMRVLIAQRPPGKTLAGLWEFPGGKVEPGESPEAALIRELTEEL CCCHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH GITVAEPCLAPLTFASHAYEHFHLLMPLYICRRWQGFVSPREGQTLKWVAPRALRDYPMP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHCCCCC PADEPLISALLDLLA CCCCHHHHHHHHHHC >Mature Secondary Structure SQSLLLVVAVALVDQDMRVLIAQRPPGKTLAGLWEFPGGKVEPGESPEAALIRELTEEL CCHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH GITVAEPCLAPLTFASHAYEHFHLLMPLYICRRWQGFVSPREGQTLKWVAPRALRDYPMP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHCCCCC PADEPLISALLDLLA CCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]