| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680416
Identifier: 182680416
GI number: 182680416
Start: 3994357
End: 3994980
Strand: Reverse
Name: 182680416
Synonym: Bind_3516
Alternate gene names: NA
Gene position: 3994980-3994357 (Counterclockwise)
Preceding gene: 182680417
Following gene: 182680412
Centisome position: 95.8
GC content: 41.99
Gene sequence:
>624_bases ATGTTAGTTTTGGAACAAGAAAATCAAGAATTATTTGACCGTATTCAGGAAATGAACCTGATACGGCAATATGAACTTTT GACAAACTGCATAGAAATAGGGTTGAGTCAAGGCGGTCGAGTCTTCGACAAATACATGTTATGGGATCTAAATCATGTTG CAGTAGCGAATATATCTCAATTTGGTGGTAGATTTCGCGAAGAGCCTATTTACGTTAGTGATCACAAGCCACCCCATTTC CGTGAAGTCCCCCATCTAATGGATCAGTTTATATCAACGATACATGAGAATTGGTATAATTGGACGACCACTGAAATTGC TGCTTATGCTCTTTGGCGCTTATTGTGGATTCATCCATTCATAGAAGGGAATGGACGGACAGCACGAGCCGCATGTTATT ATTTGTTATGTGTTCATTCTGGAGGGCTGATCGGTGGCCGTAAAATTGTACCAGAGCGTATAAGAGAAAACAGAACGCCT TATTACGCGGCCCTAAAGAGCGCCGATATTGCTTGGGAAGGGGGCAATCTAGATTTCTCTGCACTTGAAGAATATTTAGC GGCGCTTCTACAAGAACAGATTACAGACGAAGGGCTACCATATAATGGAGCATCAAGCGTTTGA
Upstream 100 bases:
>100_bases CTGCTCGCTTAGCTGCAAAAAGTATCAGAGTCACAGGAAAACAAGCATTAGCACAATAAATCAGGGGAGGAGTTTAGTTC ATCACTAAACTCCTTTTTGC
Downstream 100 bases:
>100_bases TATAATACTTCCACGCCGTAAATTGGCCTTGAACTCAATTTTAATAGTCAAAGAAACTGTCACTAATACCAAATCTCCTT GATCACGACCCGTCGTGATC
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MLVLEQENQELFDRIQEMNLIRQYELLTNCIEIGLSQGGRVFDKYMLWDLNHVAVANISQFGGRFREEPIYVSDHKPPHF REVPHLMDQFISTIHENWYNWTTTEIAAYALWRLLWIHPFIEGNGRTARAACYYLLCVHSGGLIGGRKIVPERIRENRTP YYAALKSADIAWEGGNLDFSALEEYLAALLQEQITDEGLPYNGASSV
Sequences:
>Translated_207_residues MLVLEQENQELFDRIQEMNLIRQYELLTNCIEIGLSQGGRVFDKYMLWDLNHVAVANISQFGGRFREEPIYVSDHKPPHF REVPHLMDQFISTIHENWYNWTTTEIAAYALWRLLWIHPFIEGNGRTARAACYYLLCVHSGGLIGGRKIVPERIRENRTP YYAALKSADIAWEGGNLDFSALEEYLAALLQEQITDEGLPYNGASSV >Mature_207_residues MLVLEQENQELFDRIQEMNLIRQYELLTNCIEIGLSQGGRVFDKYMLWDLNHVAVANISQFGGRFREEPIYVSDHKPPHF REVPHLMDQFISTIHENWYNWTTTEIAAYALWRLLWIHPFIEGNGRTARAACYYLLCVHSGGLIGGRKIVPERIRENRTP YYAALKSADIAWEGGNLDFSALEEYLAALLQEQITDEGLPYNGASSV
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42794620, Length=109, Percent_Identity=36.697247706422, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23895; Mature: 23895
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLEQENQELFDRIQEMNLIRQYELLTNCIEIGLSQGGRVFDKYMLWDLNHVAVANISQ CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH FGGRFREEPIYVSDHKPPHFREVPHLMDQFISTIHENWYNWTTTEIAAYALWRLLWIHPF HCCHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IEGNGRTARAACYYLLCVHSGGLIGGRKIVPERIRENRTPYYAALKSADIAWEGGNLDFS CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEECCCCCCHH ALEEYLAALLQEQITDEGLPYNGASSV HHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLVLEQENQELFDRIQEMNLIRQYELLTNCIEIGLSQGGRVFDKYMLWDLNHVAVANISQ CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH FGGRFREEPIYVSDHKPPHFREVPHLMDQFISTIHENWYNWTTTEIAAYALWRLLWIHPF HCCHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IEGNGRTARAACYYLLCVHSGGLIGGRKIVPERIRENRTPYYAALKSADIAWEGGNLDFS CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEECCCCCCHH ALEEYLAALLQEQITDEGLPYNGASSV HHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA