| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is dld [H]
Identifier: 182680351
GI number: 182680351
Start: 3917752
End: 3919491
Strand: Reverse
Name: dld [H]
Synonym: Bind_3451
Alternate gene names: 182680351
Gene position: 3919491-3917752 (Counterclockwise)
Preceding gene: 182680355
Following gene: 182680347
Centisome position: 93.99
GC content: 56.72
Gene sequence:
>1740_bases ATGACAACCACCCTCAACGAGCATCGGGCGGCGAGCGGCGTGCCGGATCAAGGCAATGAGATCTTGATCGCGACATTGAA AGGCATTGTCGGAGACAGCCATGTTCTGACGAGCCCTGAAGCCACTTTGCGATTTCGCACTGGCTTTCGCTTCGGTCGTG GCTCCGCGCTGGCGGTGGTGCAGCCGGGCAGCCTCGTCGAGCAATGGAAAGTGCTGCAGGCCTGTGCGGCAGCGGACAAG ATCATCATCATGCAGGCCGCCAATACGGGGTTGACCGGCGGCTCGACCCCGGATGGCGATGATTATGATCGTGAGATCGT CATCATCAGCACTTTGCGGATGGCCAAGGTCTATCTGATCGAGGAGGGGCGGCAGGTAGTCTGCCTGCCCGGCGCGACGC TCTATCAGCTTGAACAGGTTTTACGGCCCCTCGGCCGCGAGCCGCATTCGGTCATTGGCTCTTCCTGTATTGGCGCTTCG GTGTTTGGCGGTGTCTGCAACAATTCCGGCGGCGCCCTGATCCAGCGTGGACCAGCCTATACACAAATGACGCTCTATGC CCGCATCGACGAAACGGGCAAGATCGAATTGATCAATCATCTTGGCATTCGTCTCGGCAATGATCCCGAGACGATCCTGA AAAGGCTCGATGACGGCGATCTCAAAGATACGGATGTCGATCATGATCCGAGCCGTTTCGCCTCGGATCATGATTACATT CATCATGTCCGTGATATCGAGGCGGATACGCCGGCGCGATTCAACGCCGACCCCAAACGATTGTTCGAAGCCTCGGGGAG CGCCGGCAAGGTCATGCTGTTCGCGGTCCGGCTGGATACATTCGAGCGCGAGGAGAAAACAGCCGTTTTCTATATCGGGA CCAATGATCCGGCGGAATTGACCGAGATTCGCCGGCATATTCTGGCGCAATTCAAAACCCTGCCGGTGTCGGGCGAATAT ATGCATCGCGACGCCTTCGACATTGCCGAAACCTATGGCAAGGATACGTTTCTCGCGATCCGCGCGCTCGGCACGGATCG ATTACCCAAACTTTTTGCCTGGAAAGCCAAGTTCGATGTGTTCGTGCAGAGATACAGGTTTCTGCCCCAAGATCTCAGCG ACAAGATCATGCAGGCGGTGAGCCGTCTCTTTCCGAGCCATCTGCCCCCGCGGATGAAAGACTATCGCGACCGGTTCGAG CATCATCTGATGCTAAAAATGGCCGGCCCCGGCATCGAGGAGGCGCGCACCTATCTGCGATCCATTTTCCCCTCGGCGAA GGGACATTTCTTCGAATGTACGCCGGAGGAGGGCGTAAAGGCTTTTCTGCATCGTTTCGCGACCGCCGGTGCGGCGATCC GTTATCGCGCGATCCATCGCCAGGAAGTGGAGGATATTGTCGCTCTCGACATAGCGTTACGCCGCAACGATCGCGACTGG ATAGAAACCCTGCCGCCCGCCATTGACGCGCCAATCCTCCATAAACTCTATTACGGCCACTTCTTCTGTTACGTCTTCCA CCAGGATTATATTGTGAAGAAGGGCCATGACACGCTGGCGCTCGAACACGAGATGTGGACGCTTCTCGATGAGCGCGGCG CGCAATATCCAGCAGAGCATAATGTCGGGCATCTTTATCATGCCAAACCAGCCCTGGTCGGGCATTATAAAAACCTCGAC CCCTGCAATACGTTCAATCCGGGCATTGGGCATACATCGAAACATGCCCATTGGCGGTGA
Upstream 100 bases:
>100_bases CTAGCTTAAGGACAGCAGCTGAAGTACTATCCTTGGAAAAATCTCGGCGGCTTTCTCGTCGGGGCGAGCGACGAGACCGG TCGCGATCAGGGAGATGATA
Downstream 100 bases:
>100_bases TAGGCGGCGGGTTTGCAGGAAGCAACAGACCCAAAAGCGGAGACCGCGTTTGGGTTCAAACAATTAGTGCGGGACCCAGA AACGGGGGGCATTGTTATCA
Product: D-lactate dehydrogenase
Products: NA
Alternate protein names: Respiratory D-lactate dehydrogenase [H]
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MTTTLNEHRAASGVPDQGNEILIATLKGIVGDSHVLTSPEATLRFRTGFRFGRGSALAVVQPGSLVEQWKVLQACAAADK IIIMQAANTGLTGGSTPDGDDYDREIVIISTLRMAKVYLIEEGRQVVCLPGATLYQLEQVLRPLGREPHSVIGSSCIGAS VFGGVCNNSGGALIQRGPAYTQMTLYARIDETGKIELINHLGIRLGNDPETILKRLDDGDLKDTDVDHDPSRFASDHDYI HHVRDIEADTPARFNADPKRLFEASGSAGKVMLFAVRLDTFEREEKTAVFYIGTNDPAELTEIRRHILAQFKTLPVSGEY MHRDAFDIAETYGKDTFLAIRALGTDRLPKLFAWKAKFDVFVQRYRFLPQDLSDKIMQAVSRLFPSHLPPRMKDYRDRFE HHLMLKMAGPGIEEARTYLRSIFPSAKGHFFECTPEEGVKAFLHRFATAGAAIRYRAIHRQEVEDIVALDIALRRNDRDW IETLPPAIDAPILHKLYYGHFFCYVFHQDYIVKKGHDTLALEHEMWTLLDERGAQYPAEHNVGHLYHAKPALVGHYKNLD PCNTFNPGIGHTSKHAHWR
Sequences:
>Translated_579_residues MTTTLNEHRAASGVPDQGNEILIATLKGIVGDSHVLTSPEATLRFRTGFRFGRGSALAVVQPGSLVEQWKVLQACAAADK IIIMQAANTGLTGGSTPDGDDYDREIVIISTLRMAKVYLIEEGRQVVCLPGATLYQLEQVLRPLGREPHSVIGSSCIGAS VFGGVCNNSGGALIQRGPAYTQMTLYARIDETGKIELINHLGIRLGNDPETILKRLDDGDLKDTDVDHDPSRFASDHDYI HHVRDIEADTPARFNADPKRLFEASGSAGKVMLFAVRLDTFEREEKTAVFYIGTNDPAELTEIRRHILAQFKTLPVSGEY MHRDAFDIAETYGKDTFLAIRALGTDRLPKLFAWKAKFDVFVQRYRFLPQDLSDKIMQAVSRLFPSHLPPRMKDYRDRFE HHLMLKMAGPGIEEARTYLRSIFPSAKGHFFECTPEEGVKAFLHRFATAGAAIRYRAIHRQEVEDIVALDIALRRNDRDW IETLPPAIDAPILHKLYYGHFFCYVFHQDYIVKKGHDTLALEHEMWTLLDERGAQYPAEHNVGHLYHAKPALVGHYKNLD PCNTFNPGIGHTSKHAHWR >Mature_578_residues TTTLNEHRAASGVPDQGNEILIATLKGIVGDSHVLTSPEATLRFRTGFRFGRGSALAVVQPGSLVEQWKVLQACAAADKI IIMQAANTGLTGGSTPDGDDYDREIVIISTLRMAKVYLIEEGRQVVCLPGATLYQLEQVLRPLGREPHSVIGSSCIGASV FGGVCNNSGGALIQRGPAYTQMTLYARIDETGKIELINHLGIRLGNDPETILKRLDDGDLKDTDVDHDPSRFASDHDYIH HVRDIEADTPARFNADPKRLFEASGSAGKVMLFAVRLDTFEREEKTAVFYIGTNDPAELTEIRRHILAQFKTLPVSGEYM HRDAFDIAETYGKDTFLAIRALGTDRLPKLFAWKAKFDVFVQRYRFLPQDLSDKIMQAVSRLFPSHLPPRMKDYRDRFEH HLMLKMAGPGIEEARTYLRSIFPSAKGHFFECTPEEGVKAFLHRFATAGAAIRYRAIHRQEVEDIVALDIALRRNDRDWI ETLPPAIDAPILHKLYYGHFFCYVFHQDYIVKKGHDTLALEHEMWTLLDERGAQYPAEHNVGHLYHAKPALVGHYKNLDP CNTFNPGIGHTSKHAHWR
Specific function: First component of the membrane-bound D-lactate oxidase, which is believed to play an important role in the energization of the active transport of a variety of sugars and amino acids [H]
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788454, Length=568, Percent_Identity=64.2605633802817, Blast_Score=761, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016172 - InterPro: IPR016173 - InterPro: IPR012256 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016164 - InterPro: IPR016168 - InterPro: IPR015409 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF09330 Lact-deh-memb [H]
EC number: =1.1.1.28 [H]
Molecular weight: Translated: 65092; Mature: 64961
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTLNEHRAASGVPDQGNEILIATLKGIVGDSHVLTSPEATLRFRTGFRFGRGSALAVV CCCCCCCHHCCCCCCCCCCEEEEEEEHHHCCCCCEECCCCCEEEEECCCEECCCCEEEEE QPGSLVEQWKVLQACAAADKIIIMQAANTGLTGGSTPDGDDYDREIVIISTLRMAKVYLI CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEHHHHHHEEEE EEGRQVVCLPGATLYQLEQVLRPLGREPHSVIGSSCIGASVFGGVCNNSGGALIQRGPAY ECCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC TQMTLYARIDETGKIELINHLGIRLGNDPETILKRLDDGDLKDTDVDHDPSRFASDHDYI EEEEEEEEECCCCCEEEEEECCCEECCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHH HHVRDIEADTPARFNADPKRLFEASGSAGKVMLFAVRLDTFEREEKTAVFYIGTNDPAEL HHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCHHHH TEIRRHILAQFKTLPVSGEYMHRDAFDIAETYGKDTFLAIRALGTDRLPKLFAWKAKFDV HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHH FVQRYRFLPQDLSDKIMQAVSRLFPSHLPPRMKDYRDRFEHHLMLKMAGPGIEEARTYLR HHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHH SIFPSAKGHFFECTPEEGVKAFLHRFATAGAAIRYRAIHRQEVEDIVALDIALRRNDRDW HHCCCCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IETLPPAIDAPILHKLYYGHFFCYVFHQDYIVKKGHDTLALEHEMWTLLDERGAQYPAEH HHHCCCCCCHHHHHHHHHHHEEEEEEECCEEEECCCCCEEEHHHHHHHHHHCCCCCCCCC NVGHLYHAKPALVGHYKNLDPCNTFNPGIGHTSKHAHWR CCCCEEECCCHHEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTTLNEHRAASGVPDQGNEILIATLKGIVGDSHVLTSPEATLRFRTGFRFGRGSALAVV CCCCCCHHCCCCCCCCCCEEEEEEEHHHCCCCCEECCCCCEEEEECCCEECCCCEEEEE QPGSLVEQWKVLQACAAADKIIIMQAANTGLTGGSTPDGDDYDREIVIISTLRMAKVYLI CCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEHHHHHHEEEE EEGRQVVCLPGATLYQLEQVLRPLGREPHSVIGSSCIGASVFGGVCNNSGGALIQRGPAY ECCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCC TQMTLYARIDETGKIELINHLGIRLGNDPETILKRLDDGDLKDTDVDHDPSRFASDHDYI EEEEEEEEECCCCCEEEEEECCCEECCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHH HHVRDIEADTPARFNADPKRLFEASGSAGKVMLFAVRLDTFEREEKTAVFYIGTNDPAEL HHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCHHHH TEIRRHILAQFKTLPVSGEYMHRDAFDIAETYGKDTFLAIRALGTDRLPKLFAWKAKFDV HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHH FVQRYRFLPQDLSDKIMQAVSRLFPSHLPPRMKDYRDRFEHHLMLKMAGPGIEEARTYLR HHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHH SIFPSAKGHFFECTPEEGVKAFLHRFATAGAAIRYRAIHRQEVEDIVALDIALRRNDRDW HHCCCCCCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IETLPPAIDAPILHKLYYGHFFCYVFHQDYIVKKGHDTLALEHEMWTLLDERGAQYPAEH HHHCCCCCCHHHHHHHHHHHEEEEEEECCEEEECCCCCEEEHHHHHHHHHHCCCCCCCCC NVGHLYHAKPALVGHYKNLDPCNTFNPGIGHTSKHAHWR CCCCEEECCCHHEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6386470; 3882663; 9278503; 10944213 [H]