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The map label for this gene is ykoG [H]

Identifier: 182680347

GI number: 182680347

Start: 3912564

End: 3913397

Strand: Reverse

Name: ykoG [H]

Synonym: Bind_3447

Alternate gene names: 182680347

Gene position: 3913397-3912564 (Counterclockwise)

Preceding gene: 182680351

Following gene: 182680346

Centisome position: 93.84

GC content: 59.95

Gene sequence:

>834_bases
ATGAACAAAACTCTCACCAAGACAGAACCAGACGATTTGCCGCCAAATTTCAAAGGCGGCCTATCCAAGGCGCGGCCTCT
TGGCACTCTGCCCCCGCGCGAGACCGCGAAGCGGCAGAAGTCGGACAAGGTGAAAATCATTCAGACGCAGAATGGCAAAC
CGGTTTCGATTCTCCTCGTCGAGGACGAAGCCGACATGGCCTCGGAAATCGCCGCGGAGCTGACCAAGCTTGGTTATCAT
GTGCAGATCGAAGAGACGGGGCCCGCTGGGCTTGCCGCCGCGCGCTCGCAAGCCATGTCCCTGTTGATCATCGACCGCAT
GCTCCCCGAAACCGATGGTCTCACGCTCATTGAGACTTTGCGGCAGGAAGGGATCCTGACGCCCGTCCTCGTGGTCAGCG
CGCTCGGATCGGTCGATGAGAAAATCCGTGGCCTCAAGGCCGGGGGCGACGATTATCTGACCAAGCCCTTTGCCATGGGC
GAACTCGCCGCACGCGTCGAGGCTCTTCTGCGCCGGCCTGCCGCCGAAGCCCGCAGCGCCATTCTGCGCGTCGGCTCGCT
GGAAATGGATCTGATCGAGCGCACCGTGCGGCGCAATGAACGCCTGCTCGACCTGCTGCCACGCGAATTCAAGCTGTTGG
AATATCTTATGCGCCGGCCGGGCCAGACGGTGACACGGGCCATGCTGCTCGAGGATGTTTGGAATTATAACTTTTTGCCG
CAGACCAATCTGGTCGATGTGCATATCGGCAAGCTGCGCAAGAAGATCGATCAACCGGGCGAGGTCCAAATGATCGAGAG
TGTGCGCGGCGCCGGGTTCCGGCTCAACAATTAA

Upstream 100 bases:

>100_bases
TACTAGCGCGTCACTCCCTCCGCGTGAACTCCAACGGTTTGACCCGTTGATGATTTTGATGCTCGCGCGGCCCCTGGTTT
TTTGAATTCTGGAGGGCGAG

Downstream 100 bases:

>100_bases
GGTTTTGGCGTTGCCCTATGATCTTCGTCAGTGGCCGCGCAAACTTTTTCGGGCCGCGACCTTCCGTCTGGCCATTCTCT
TCGCACTCGCTGTTACCGCT

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNKTLTKTEPDDLPPNFKGGLSKARPLGTLPPRETAKRQKSDKVKIIQTQNGKPVSILLVEDEADMASEIAAELTKLGYH
VQIEETGPAGLAAARSQAMSLLIIDRMLPETDGLTLIETLRQEGILTPVLVVSALGSVDEKIRGLKAGGDDYLTKPFAMG
ELAARVEALLRRPAAEARSAILRVGSLEMDLIERTVRRNERLLDLLPREFKLLEYLMRRPGQTVTRAMLLEDVWNYNFLP
QTNLVDVHIGKLRKKIDQPGEVQMIESVRGAGFRLNN

Sequences:

>Translated_277_residues
MNKTLTKTEPDDLPPNFKGGLSKARPLGTLPPRETAKRQKSDKVKIIQTQNGKPVSILLVEDEADMASEIAAELTKLGYH
VQIEETGPAGLAAARSQAMSLLIIDRMLPETDGLTLIETLRQEGILTPVLVVSALGSVDEKIRGLKAGGDDYLTKPFAMG
ELAARVEALLRRPAAEARSAILRVGSLEMDLIERTVRRNERLLDLLPREFKLLEYLMRRPGQTVTRAMLLEDVWNYNFLP
QTNLVDVHIGKLRKKIDQPGEVQMIESVRGAGFRLNN
>Mature_277_residues
MNKTLTKTEPDDLPPNFKGGLSKARPLGTLPPRETAKRQKSDKVKIIQTQNGKPVSILLVEDEADMASEIAAELTKLGYH
VQIEETGPAGLAAARSQAMSLLIIDRMLPETDGLTLIETLRQEGILTPVLVVSALGSVDEKIRGLKAGGDDYLTKPFAMG
ELAARVEALLRRPAAEARSAILRVGSLEMDLIERTVRRNERLLDLLPREFKLLEYLMRRPGQTVTRAMLLEDVWNYNFLP
QTNLVDVHIGKLRKKIDQPGEVQMIESVRGAGFRLNN

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=38.0090497737557, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI87082012, Length=219, Percent_Identity=37.4429223744292, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=34.0807174887892, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=36.3636363636364, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1790552, Length=221, Percent_Identity=35.7466063348416, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=35.5855855855856, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787375, Length=217, Percent_Identity=31.7972350230415, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=32.4324324324324, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788394, Length=223, Percent_Identity=32.2869955156951, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1789809, Length=224, Percent_Identity=29.0178571428571, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI2367329, Length=225, Percent_Identity=32.8888888888889, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=30.8695652173913, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787229, Length=233, Percent_Identity=27.8969957081545, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=30.4347826086957, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790437, Length=116, Percent_Identity=31.0344827586207, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 30739; Mature: 30739

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTLTKTEPDDLPPNFKGGLSKARPLGTLPPRETAKRQKSDKVKIIQTQNGKPVSILLV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEE
EDEADMASEIAAELTKLGYHVQIEETGPAGLAAARSQAMSLLIIDRMLPETDGLTLIETL
ECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RQEGILTPVLVVSALGSVDEKIRGLKAGGDDYLTKPFAMGELAARVEALLRRPAAEARSA
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
ILRVGSLEMDLIERTVRRNERLLDLLPREFKLLEYLMRRPGQTVTRAMLLEDVWNYNFLP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
QTNLVDVHIGKLRKKIDQPGEVQMIESVRGAGFRLNN
CCCEEEHHHHHHHHHHCCCCHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MNKTLTKTEPDDLPPNFKGGLSKARPLGTLPPRETAKRQKSDKVKIIQTQNGKPVSILLV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEE
EDEADMASEIAAELTKLGYHVQIEETGPAGLAAARSQAMSLLIIDRMLPETDGLTLIETL
ECCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
RQEGILTPVLVVSALGSVDEKIRGLKAGGDDYLTKPFAMGELAARVEALLRRPAAEARSA
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
ILRVGSLEMDLIERTVRRNERLLDLLPREFKLLEYLMRRPGQTVTRAMLLEDVWNYNFLP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
QTNLVDVHIGKLRKKIDQPGEVQMIESVRGAGFRLNN
CCCEEEHHHHHHHHHHCCCCHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]