| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is fabH [H]
Identifier: 182680279
GI number: 182680279
Start: 3832399
End: 3833379
Strand: Reverse
Name: fabH [H]
Synonym: Bind_3379
Alternate gene names: 182680279
Gene position: 3833379-3832399 (Counterclockwise)
Preceding gene: 182680280
Following gene: 182680278
Centisome position: 91.92
GC content: 61.77
Gene sequence:
>981_bases ATGCCAGGGCAATTGCGCTCGGTCGTGGTCGGGCTCGGCGCTTATCTTCCCAAGCGCATCGTCAGCAATGACGATATCGC CAAAATGCTCGAGACCTCAGACGACTGGATCGTGCAGCGCACCGGTATCCGGCAGCGCCATGTTGCCGGCGAAGGGGAAC AGACCTCCGTGCTCGGCCTGCGAGCCGCGCAAGCGGCGCTGGCCGACGCGGGGCTCAGCGGCGCGGATATCGATCTCATC ATCGTCGCCACATCGACGCCGGATTATACATTCCCGGCGGTCGCGACGCAGATCCAGGCCGCCCTGGGCATGACACATGG CGCGGCCTTCGATGTGCAAGCCGTCTGCTCCGGTTTCGTCTATGCGGTGACGACAGCCGATAAATTTCTCATTTCCGGTT CGCATAAACGGGCCTTGGTCATCGGGGCCGAAACCTTTTCCAAACTGCTCGACTGGTCGGATCGCAGCACCTGCGTCCTG TTCGGTGACGGCGCCGGCGCCATTGTGCTTGAAGCCCGGCCGGGCACAGGAAGGATCAGCGATCGCGGTGTCCTGACCTC GCAATTGCGCTCGGACGGGCGACATCTCACCAAGCTCTATGTCGATGGCGGGCCCTCGACAACTGGCACCACGGGCCATT TGCGCATGGCCGGCAGGGAAGTGTTTCGCCATGCGGTCGGCATGGTGAGCGATGTTGTCAATGCCGCCTTCGAGGCCACG GGCATTACCGGTGCCGATCTCGATTGGTTCGTGCCGCATCAAGCCAACCGGCGAATCATTGAGGCTTCCGCCGAAAAACT CGGCATTGCTCCGCATAAGGTTGTGGTGACCGTTGATCTGCACGGCAATACTTCGGCCGCGTCGATCCCCCTGGCGCTCG CCAAGGCGCGTGATGATGGGCGCATCAAACAGGGCGATCTCGTCATGATCGAGGCCATGGGCGGCGGTTTCACTTGGGCT TCCGCTTTAATTCGTTGGTAA
Upstream 100 bases:
>100_bases TTGCTCCCGAAAGGGCTGTCCATTAACGGGTTTGATGCTGTAGGACCCTTGCGTAAGGTCCGCGCCTTTGGTCCAGGGAT TTCCAGACGTGATACAGAAT
Downstream 100 bases:
>100_bases TCTACTTGTCTTGACTGCTATAAAACTATATAGATATGTTAGATCAAATGGATGCGTTAAGCGGACAGTGTTGCGATCAA GCTTGCGCGTGTAAATTCGC
Product: 3-oxoacyl-(acyl-carrier-protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MPGQLRSVVVGLGAYLPKRIVSNDDIAKMLETSDDWIVQRTGIRQRHVAGEGEQTSVLGLRAAQAALADAGLSGADIDLI IVATSTPDYTFPAVATQIQAALGMTHGAAFDVQAVCSGFVYAVTTADKFLISGSHKRALVIGAETFSKLLDWSDRSTCVL FGDGAGAIVLEARPGTGRISDRGVLTSQLRSDGRHLTKLYVDGGPSTTGTTGHLRMAGREVFRHAVGMVSDVVNAAFEAT GITGADLDWFVPHQANRRIIEASAEKLGIAPHKVVVTVDLHGNTSAASIPLALAKARDDGRIKQGDLVMIEAMGGGFTWA SALIRW
Sequences:
>Translated_326_residues MPGQLRSVVVGLGAYLPKRIVSNDDIAKMLETSDDWIVQRTGIRQRHVAGEGEQTSVLGLRAAQAALADAGLSGADIDLI IVATSTPDYTFPAVATQIQAALGMTHGAAFDVQAVCSGFVYAVTTADKFLISGSHKRALVIGAETFSKLLDWSDRSTCVL FGDGAGAIVLEARPGTGRISDRGVLTSQLRSDGRHLTKLYVDGGPSTTGTTGHLRMAGREVFRHAVGMVSDVVNAAFEAT GITGADLDWFVPHQANRRIIEASAEKLGIAPHKVVVTVDLHGNTSAASIPLALAKARDDGRIKQGDLVMIEAMGGGFTWA SALIRW >Mature_325_residues PGQLRSVVVGLGAYLPKRIVSNDDIAKMLETSDDWIVQRTGIRQRHVAGEGEQTSVLGLRAAQAALADAGLSGADIDLII VATSTPDYTFPAVATQIQAALGMTHGAAFDVQAVCSGFVYAVTTADKFLISGSHKRALVIGAETFSKLLDWSDRSTCVLF GDGAGAIVLEARPGTGRISDRGVLTSQLRSDGRHLTKLYVDGGPSTTGTTGHLRMAGREVFRHAVGMVSDVVNAAFEATG ITGADLDWFVPHQANRRIIEASAEKLGIAPHKVVVTVDLHGNTSAASIPLALAKARDDGRIKQGDLVMIEAMGGGFTWAS ALIRW
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=323, Percent_Identity=46.1300309597523, Blast_Score=296, Evalue=2e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 34345; Mature: 34213
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGQLRSVVVGLGAYLPKRIVSNDDIAKMLETSDDWIVQRTGIRQRHVAGEGEQTSVLGL CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCHHHCCCCCCCEEEEEH RAAQAALADAGLSGADIDLIIVATSTPDYTFPAVATQIQAALGMTHGAAFDVQAVCSGFV HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHCCEE YAVTTADKFLISGSHKRALVIGAETFSKLLDWSDRSTCVLFGDGAGAIVLEARPGTGRIS EEEEECCEEEEECCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCC DRGVLTSQLRSDGRHLTKLYVDGGPSTTGTTGHLRMAGREVFRHAVGMVSDVVNAAFEAT CCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHC GITGADLDWFVPHQANRRIIEASAEKLGIAPHKVVVTVDLHGNTSAASIPLALAKARDDG CCCCCCCEEECCCCCCCEEEECCHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCC RIKQGDLVMIEAMGGGFTWASALIRW CEECCCEEEEEECCCCHHHHHHHHCC >Mature Secondary Structure PGQLRSVVVGLGAYLPKRIVSNDDIAKMLETSDDWIVQRTGIRQRHVAGEGEQTSVLGL CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCHHHCCCCCCCEEEEEH RAAQAALADAGLSGADIDLIIVATSTPDYTFPAVATQIQAALGMTHGAAFDVQAVCSGFV HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHCCEE YAVTTADKFLISGSHKRALVIGAETFSKLLDWSDRSTCVLFGDGAGAIVLEARPGTGRIS EEEEECCEEEEECCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCC DRGVLTSQLRSDGRHLTKLYVDGGPSTTGTTGHLRMAGREVFRHAVGMVSDVVNAAFEAT CCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHC GITGADLDWFVPHQANRRIIEASAEKLGIAPHKVVVTVDLHGNTSAASIPLALAKARDDG CCCCCCCEEECCCCCCCEEEECCHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCC RIKQGDLVMIEAMGGGFTWASALIRW CEECCCEEEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]