| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680271
Identifier: 182680271
GI number: 182680271
Start: 3826120
End: 3828057
Strand: Reverse
Name: 182680271
Synonym: Bind_3371
Alternate gene names: NA
Gene position: 3828057-3826120 (Counterclockwise)
Preceding gene: 182680272
Following gene: 182680270
Centisome position: 91.8
GC content: 58.57
Gene sequence:
>1938_bases ATGACTGATTATCTTCCTGCTCCTTCGACAACTGATTACATTACATATACGGGCGTTGGCATGGTGCCCGCCTCCACTGT CACAGTTTACAATGGCAGTACCGAGGCAGGCACGGCGACCGTTGCGGCGGATGGCACATGGTCCTTTACATTCTCGGTAA CACCGGCCAGCGGGTCGGAAATTTATTACACAGGTGAGTCCACAAGCTCGTCCATCACTGTCCCGTCCTTTGCGACGCTT GTCCCGCTTTCACTCTCCCCGCTCACGGTGCAAGCGGGTGGCACATTCAGCGGCACAATCACAGGTCAAACAGCTGGCTC GACGATTGCCGCCCTCTCGACGGATGGGACGGCTCTGACGGTCAGCGGCGACAATGTGACCGGGACATTCTCTGCCAATG GCGTCATGACAATCAGCCTGACCGAGATGCTCGCGGGGGCCACGAATACACCCCATCTCTCGACCACAGAGATGACTGTC TCGAATAATACGTCTCAGGACCCGGCATTCAGCCTCGCGCGGACCGTCCTTGTCGCGAATGGCGGCACGAGCCTCAGTGC CAATGGGTTCTCATTTAAGGCGGTCACGATTTCCAATGTTTCCGGTGTTTATGCCGATGCCTATTACATGCGCGGCTATA TGACCCCGCTCATGTCTCTCATGGGCTGGAACTATGAGAACTCGCGCGTCTGGGCCATCGGTGGCAATACGCTTGCTCAG GTCCTCTCCAACTACAGCGCAACGGGTGTCACGCCGGCCAATACGCGGTGGGGCACGCTCGGATCGGGTGGCTGGTCGCC GGATATCTTCTTCGCTGAAGGCGGCTCGAACGACCTTGGCAACACATTGACACAGATGCAATCCGATGCCACGGCGGTCG ATAATTATCTGCTCGGCCTCAGTCCCGTCCCTCGCATCCTGAACGAGTCCATCTGGCCGCGGACCAGCTTTCCGACCGGC ACCGATCTGACCTTCGTCCGGTCCGAGCGGCTCCAATTCAATCAGTGGCGTGAACAGAAAAGCGCCTCGTTTCCAAAGTT AAAAGCGTATAACCTTGACGCACTCATGCAGGACCCGGCAAATCCTGGTCAGGCGAACCCACCCTATACCTATGACGGCG TGCATCCGAATTCCAAGGGCGCGATCCGCGTCGCGAACGATATGTTCTCGAAACTGTCGTCGCTCAACATGTTGCCGGCC CCAGTGCTTCTCCCGCTGACCCTTGATGCGGCGGCCGATCCGACCAATCTGCTGCAGCACGAAGGTGCAACCAATTCGGC GCGACAGCTTCTCGCCGGTACATCGGGTGGTTTGACCAATTTCGCGACAGGGAGCGTCATATGCTCCGGCTTCAACGCGT CCGCCGACGCAAGTTGGGGAACGACGGACACCCAGGCGCTTCCGGCTTTCTCGATGGAGGCGGATGACAACGCGACGAAA CTGAAGCGGATGGTCATTACCTATCCGACCAGGACTTCGCCGGGAACACTCGGAAATGGCAGTGCCGACGCGGGCAAAAT CTGGGTCGTCGTCGGGACAGGCGGGACGCTGATCTCCTCCGCACGCGCCTCAAACTATGATGGGGCAGGGGCGAGCATCG TGGCTGGTAATCGCTACCGGGCTGGTGTCCGGCTCCAGATTATCAACGGCGTCAACCTGTTCCCGGCTGCGTTCTACTTC AGGTGGAAAGTCGATGGGGTGACGGTGATTCAGACCTCGTGGGCCTGTTCCAGCCTTTATGACGCCAATGACGCCTTCCC TGACGGCACCTATGACATATTGTCGCCGATCTTCACGGTGCCGGCCTTCCAATCCTCGATCGAGTTGACCAGTCTGCAAG TTTATCTCGCCAGCGTCCCCGGAGCCCCGGTCGGTGGCACGGTCAAGCTCAGCAAATGGTATGTGCGGCCCTATCAGTTC CTTGCCTCTTGGCCGTAA
Upstream 100 bases:
>100_bases GTGGGAGGGGCAGCGTGACGCTTGAGGATCATGTCTTCAAGCCATGGCGTAACGAAAAGCGGGGAACATTCCCCGCTTTT ATTTTTTTGAAAGGCTTAAT
Downstream 100 bases:
>100_bases GGGAATTTCAAGCGGCATAATGTCGCCAATGAGGACGAAGACCCTCTCGCTTTGGCGAGAGGGTCTTAAGGCGCTCTCCG CCGCGATCAGGTGAGCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 645; Mature: 644
Protein sequence:
>645_residues MTDYLPAPSTTDYITYTGVGMVPASTVTVYNGSTEAGTATVAADGTWSFTFSVTPASGSEIYYTGESTSSSITVPSFATL VPLSLSPLTVQAGGTFSGTITGQTAGSTIAALSTDGTALTVSGDNVTGTFSANGVMTISLTEMLAGATNTPHLSTTEMTV SNNTSQDPAFSLARTVLVANGGTSLSANGFSFKAVTISNVSGVYADAYYMRGYMTPLMSLMGWNYENSRVWAIGGNTLAQ VLSNYSATGVTPANTRWGTLGSGGWSPDIFFAEGGSNDLGNTLTQMQSDATAVDNYLLGLSPVPRILNESIWPRTSFPTG TDLTFVRSERLQFNQWREQKSASFPKLKAYNLDALMQDPANPGQANPPYTYDGVHPNSKGAIRVANDMFSKLSSLNMLPA PVLLPLTLDAAADPTNLLQHEGATNSARQLLAGTSGGLTNFATGSVICSGFNASADASWGTTDTQALPAFSMEADDNATK LKRMVITYPTRTSPGTLGNGSADAGKIWVVVGTGGTLISSARASNYDGAGASIVAGNRYRAGVRLQIINGVNLFPAAFYF RWKVDGVTVIQTSWACSSLYDANDAFPDGTYDILSPIFTVPAFQSSIELTSLQVYLASVPGAPVGGTVKLSKWYVRPYQF LASWP
Sequences:
>Translated_645_residues MTDYLPAPSTTDYITYTGVGMVPASTVTVYNGSTEAGTATVAADGTWSFTFSVTPASGSEIYYTGESTSSSITVPSFATL VPLSLSPLTVQAGGTFSGTITGQTAGSTIAALSTDGTALTVSGDNVTGTFSANGVMTISLTEMLAGATNTPHLSTTEMTV SNNTSQDPAFSLARTVLVANGGTSLSANGFSFKAVTISNVSGVYADAYYMRGYMTPLMSLMGWNYENSRVWAIGGNTLAQ VLSNYSATGVTPANTRWGTLGSGGWSPDIFFAEGGSNDLGNTLTQMQSDATAVDNYLLGLSPVPRILNESIWPRTSFPTG TDLTFVRSERLQFNQWREQKSASFPKLKAYNLDALMQDPANPGQANPPYTYDGVHPNSKGAIRVANDMFSKLSSLNMLPA PVLLPLTLDAAADPTNLLQHEGATNSARQLLAGTSGGLTNFATGSVICSGFNASADASWGTTDTQALPAFSMEADDNATK LKRMVITYPTRTSPGTLGNGSADAGKIWVVVGTGGTLISSARASNYDGAGASIVAGNRYRAGVRLQIINGVNLFPAAFYF RWKVDGVTVIQTSWACSSLYDANDAFPDGTYDILSPIFTVPAFQSSIELTSLQVYLASVPGAPVGGTVKLSKWYVRPYQF LASWP >Mature_644_residues TDYLPAPSTTDYITYTGVGMVPASTVTVYNGSTEAGTATVAADGTWSFTFSVTPASGSEIYYTGESTSSSITVPSFATLV PLSLSPLTVQAGGTFSGTITGQTAGSTIAALSTDGTALTVSGDNVTGTFSANGVMTISLTEMLAGATNTPHLSTTEMTVS NNTSQDPAFSLARTVLVANGGTSLSANGFSFKAVTISNVSGVYADAYYMRGYMTPLMSLMGWNYENSRVWAIGGNTLAQV LSNYSATGVTPANTRWGTLGSGGWSPDIFFAEGGSNDLGNTLTQMQSDATAVDNYLLGLSPVPRILNESIWPRTSFPTGT DLTFVRSERLQFNQWREQKSASFPKLKAYNLDALMQDPANPGQANPPYTYDGVHPNSKGAIRVANDMFSKLSSLNMLPAP VLLPLTLDAAADPTNLLQHEGATNSARQLLAGTSGGLTNFATGSVICSGFNASADASWGTTDTQALPAFSMEADDNATKL KRMVITYPTRTSPGTLGNGSADAGKIWVVVGTGGTLISSARASNYDGAGASIVAGNRYRAGVRLQIINGVNLFPAAFYFR WKVDGVTVIQTSWACSSLYDANDAFPDGTYDILSPIFTVPAFQSSIELTSLQVYLASVPGAPVGGTVKLSKWYVRPYQFL ASWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67636; Mature: 67505
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDYLPAPSTTDYITYTGVGMVPASTVTVYNGSTEAGTATVAADGTWSFTFSVTPASGSE CCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEEECCEEEEEEEEECCCCCE IYYTGESTSSSITVPSFATLVPLSLSPLTVQAGGTFSGTITGQTAGSTIAALSTDGTALT EEEECCCCCCEEECCCHHEEEEECCCCEEEECCCEEEEEEECCCCCCEEEEEECCCCEEE VSGDNVTGTFSANGVMTISLTEMLAGATNTPHLSTTEMTVSNNTSQDPAFSLARTVLVAN EECCCEEEEEECCCEEEEEHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHEEEEEEEEC GGTSLSANGFSFKAVTISNVSGVYADAYYMRGYMTPLMSLMGWNYENSRVWAIGGNTLAQ CCCEEECCCEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHH VLSNYSATGVTPANTRWGTLGSGGWSPDIFFAEGGSNDLGNTLTQMQSDATAVDNYLLGL HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHEEECC SPVPRILNESIWPRTSFPTGTDLTFVRSERLQFNQWREQKSASFPKLKAYNLDALMQDPA CCHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCHHHHCCCC NPGQANPPYTYDGVHPNSKGAIRVANDMFSKLSSLNMLPAPVLLPLTLDAAADPTNLLQH CCCCCCCCEEECCCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHC EGATNSARQLLAGTSGGLTNFATGSVICSGFNASADASWGTTDTQALPAFSMEADDNATK CCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHH LKRMVITYPTRTSPGTLGNGSADAGKIWVVVGTGGTLISSARASNYDGAGASIVAGNRYR EEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCEEEEECCCEE AGVRLQIINGVNLFPAAFYFRWKVDGVTVIQTSWACSSLYDANDAFPDGTYDILSPIFTV CCEEEEEECCCCCCCEEEEEEEEECCEEEEEECCCHHHHCCCCCCCCCCCHHHHHHHHHC PAFQSSIELTSLQVYLASVPGAPVGGTVKLSKWYVRPYQFLASWP CCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEECHHHHHCCCC >Mature Secondary Structure TDYLPAPSTTDYITYTGVGMVPASTVTVYNGSTEAGTATVAADGTWSFTFSVTPASGSE CCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEEECCEEEEEEEEECCCCCE IYYTGESTSSSITVPSFATLVPLSLSPLTVQAGGTFSGTITGQTAGSTIAALSTDGTALT EEEECCCCCCEEECCCHHEEEEECCCCEEEECCCEEEEEEECCCCCCEEEEEECCCCEEE VSGDNVTGTFSANGVMTISLTEMLAGATNTPHLSTTEMTVSNNTSQDPAFSLARTVLVAN EECCCEEEEEECCCEEEEEHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHEEEEEEEEC GGTSLSANGFSFKAVTISNVSGVYADAYYMRGYMTPLMSLMGWNYENSRVWAIGGNTLAQ CCCEEECCCEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHH VLSNYSATGVTPANTRWGTLGSGGWSPDIFFAEGGSNDLGNTLTQMQSDATAVDNYLLGL HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHEEECC SPVPRILNESIWPRTSFPTGTDLTFVRSERLQFNQWREQKSASFPKLKAYNLDALMQDPA CCHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCHHHHCCCC NPGQANPPYTYDGVHPNSKGAIRVANDMFSKLSSLNMLPAPVLLPLTLDAAADPTNLLQH CCCCCCCCEEECCCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHC EGATNSARQLLAGTSGGLTNFATGSVICSGFNASADASWGTTDTQALPAFSMEADDNATK CCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHH LKRMVITYPTRTSPGTLGNGSADAGKIWVVVGTGGTLISSARASNYDGAGASIVAGNRYR EEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCEEEEECCCEE AGVRLQIINGVNLFPAAFYFRWKVDGVTVIQTSWACSSLYDANDAFPDGTYDILSPIFTV CCEEEEEECCCCCCCEEEEEEEEECCEEEEEECCCHHHHCCCCCCCCCCCHHHHHHHHHC PAFQSSIELTSLQVYLASVPGAPVGGTVKLSKWYVRPYQFLASWP CCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEECHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA