Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182680270

Identifier: 182680270

GI number: 182680270

Start: 3825514

End: 3825927

Strand: Reverse

Name: 182680270

Synonym: Bind_3370

Alternate gene names: NA

Gene position: 3825927-3825514 (Counterclockwise)

Preceding gene: 182680271

Following gene: 182680269

Centisome position: 91.75

GC content: 51.21

Gene sequence:

>414_bases
ATGTGTCAAAATCACGCCACGGCTCTTGCTGGGTGCCTCGTCGGGGCGCGTCGCGGAGAGAGCATCAAATCAAAGAACAG
ACATGACTTTTGGGATGAATTCGCATCCGATTCTGATTTAAAGAGCGATGCTCTCGTGTTTTGCTCGCTCATCCAGCGCG
AGCGAGATCATGGGCACCCCATGGCATCAAATTCGCTTCCGTCCCATGCCCATGTGGACCTCACCCGAGGTCGGGATGAT
TGGGCTAAGCCCCGCTCCAGAAAGACCAGTTTCTCTCCCCTGGAGAATATCATACATCACTTAATGGACATGATGTTGGA
TGCAGGCGGGACGAGAGACGTTTCCACGTTTATCCGTTGCCGCTATAAGATGAAAAGATCAGTTCTGCTTCTAAACAGTG
ATCCTATGTTCTGA

Upstream 100 bases:

>100_bases
GAGCGAGCCTGCAAAAATCCCGAAAAATTGCTGAACACAATCTTAGTCTGCACACAAGATATTAATCTTACTTATTTATT
AGAATAAAGGCCGTGGCGTG

Downstream 100 bases:

>100_bases
ATTATATTGATACGGGCCTTTGGCTTGAGCAATTTTCGGAAAAAGGTGCCCAAACTACCGGGGAAACGCACTAAAAGGGT
TTTGGGAAGGCGACCGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MCQNHATALAGCLVGARRGESIKSKNRHDFWDEFASDSDLKSDALVFCSLIQRERDHGHPMASNSLPSHAHVDLTRGRDD
WAKPRSRKTSFSPLENIIHHLMDMMLDAGGTRDVSTFIRCRYKMKRSVLLLNSDPMF

Sequences:

>Translated_137_residues
MCQNHATALAGCLVGARRGESIKSKNRHDFWDEFASDSDLKSDALVFCSLIQRERDHGHPMASNSLPSHAHVDLTRGRDD
WAKPRSRKTSFSPLENIIHHLMDMMLDAGGTRDVSTFIRCRYKMKRSVLLLNSDPMF
>Mature_137_residues
MCQNHATALAGCLVGARRGESIKSKNRHDFWDEFASDSDLKSDALVFCSLIQRERDHGHPMASNSLPSHAHVDLTRGRDD
WAKPRSRKTSFSPLENIIHHLMDMMLDAGGTRDVSTFIRCRYKMKRSVLLLNSDPMF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15572; Mature: 15572

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQNHATALAGCLVGARRGESIKSKNRHDFWDEFASDSDLKSDALVFCSLIQRERDHGHP
CCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
MASNSLPSHAHVDLTRGRDDWAKPRSRKTSFSPLENIIHHLMDMMLDAGGTRDVSTFIRC
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RYKMKRSVLLLNSDPMF
HHHHHHCEEEECCCCCC
>Mature Secondary Structure
MCQNHATALAGCLVGARRGESIKSKNRHDFWDEFASDSDLKSDALVFCSLIQRERDHGHP
CCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
MASNSLPSHAHVDLTRGRDDWAKPRSRKTSFSPLENIIHHLMDMMLDAGGTRDVSTFIRC
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RYKMKRSVLLLNSDPMF
HHHHHHCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA