| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680242
Identifier: 182680242
GI number: 182680242
Start: 3796419
End: 3797282
Strand: Reverse
Name: 182680242
Synonym: Bind_3341
Alternate gene names: NA
Gene position: 3797282-3796419 (Counterclockwise)
Preceding gene: 182680243
Following gene: 182680241
Centisome position: 91.06
GC content: 57.52
Gene sequence:
>864_bases ATGGCATCGAGGACTATCTGGAGATCAAATATCTCTGCCTCGGCGGGCTCGAGACCTGAACGGAGGGGTTGCAGGCACGC AAGCCTTTACCTTGGCGCCTTGCTTCTGGTTTTGTCGTCGGCGGTAGCCTCTGCCGAGCCTTCGCTGACGGAAATCCAGG CGGTTCTGGCGCATAAAACCTTTGTCGATTTAACTCATGCCTTCAGTGAGACCACGCCGGTCTGGGAAGGTTTCCCGCAG GCGAAAATGTATCCGGCGATGAAACCGGGAACGGGCGAGCCTTATACGATCAAACAGGACGGGTTCCGATCCACTTTCTT CGCCATGGTCGGCCAATATGGCACCCATGTCGATCCACCGGCGCATTTTGCGGAAAAGGGCGCGACGCTCGATCAGATCC CGCTCAAGGAGATGATCCTGCCGCTCGTCGTCTTCGATATCACGCCATGGCTCGATAAAGAGCCGGCGCATGTCTTTTCA CTCGAGGACCTCAAAACCTGGGAGCATGAACACGGACGCGTGCCGGAGGGAGCCTTCGCGGCTTTGCGCACCGATATGGG CAAGGATTTCGAGACGAACCCCCAGTCTTTCAAGCGCCAGCCTTTTCCGGGCTGGTCGCGCGAGGCGGTGCAATTTCTTG TCGAGCAACGCGGGATCAAGGCGATCGGTCACGAATCGCTCGATAGCGATGTGACCGAGACGATGGAGACGGAGACATAC ATTCTGCAAAGTGGTCATTATCAGATCGAGGTGATGACCAATCTCGATAAAGTGCCGGCGACCGGCGCACTCATTGTCGT CACCTGGCCCAAGGTCGAGAAGGGATTGGGCTTTCCGGCGCGGGCCTTTGCGATCCTGCCTTGA
Upstream 100 bases:
>100_bases GAATATGGCATTGTTGGGATCAACGAAGGATTGATCTCGACGGAGGTCGCGCCGTTCGGTGGTGTGAAAAACTCGGGGAT CGGGCGGGAAGGGTCGAAAT
Downstream 100 bases:
>100_bases AAGGGAGAGGGTGGGGATTGATGGATGACACTGATGCTAACGCCATCACGTGACCGTGATGCGGCTCGTCTCGCAAATCG GTTAGTGTGATGCTCACGTC
Product: cyclase family protein
Products: NA
Alternate protein names: Cyclase; Metal-Dependent Hydrolase; Cyclase Family; Kynurenine Formamidase; Metal-Dependent Hydrolase/Cyclase; Twin-Arginine Translocation Pathway Signal; Cyclase Superfamily; Cyclase Superfamily Protein; Secreted Protein
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MASRTIWRSNISASAGSRPERRGCRHASLYLGALLLVLSSAVASAEPSLTEIQAVLAHKTFVDLTHAFSETTPVWEGFPQ AKMYPAMKPGTGEPYTIKQDGFRSTFFAMVGQYGTHVDPPAHFAEKGATLDQIPLKEMILPLVVFDITPWLDKEPAHVFS LEDLKTWEHEHGRVPEGAFAALRTDMGKDFETNPQSFKRQPFPGWSREAVQFLVEQRGIKAIGHESLDSDVTETMETETY ILQSGHYQIEVMTNLDKVPATGALIVVTWPKVEKGLGFPARAFAILP
Sequences:
>Translated_287_residues MASRTIWRSNISASAGSRPERRGCRHASLYLGALLLVLSSAVASAEPSLTEIQAVLAHKTFVDLTHAFSETTPVWEGFPQ AKMYPAMKPGTGEPYTIKQDGFRSTFFAMVGQYGTHVDPPAHFAEKGATLDQIPLKEMILPLVVFDITPWLDKEPAHVFS LEDLKTWEHEHGRVPEGAFAALRTDMGKDFETNPQSFKRQPFPGWSREAVQFLVEQRGIKAIGHESLDSDVTETMETETY ILQSGHYQIEVMTNLDKVPATGALIVVTWPKVEKGLGFPARAFAILP >Mature_286_residues ASRTIWRSNISASAGSRPERRGCRHASLYLGALLLVLSSAVASAEPSLTEIQAVLAHKTFVDLTHAFSETTPVWEGFPQA KMYPAMKPGTGEPYTIKQDGFRSTFFAMVGQYGTHVDPPAHFAEKGATLDQIPLKEMILPLVVFDITPWLDKEPAHVFSL EDLKTWEHEHGRVPEGAFAALRTDMGKDFETNPQSFKRQPFPGWSREAVQFLVEQRGIKAIGHESLDSDVTETMETETYI LQSGHYQIEVMTNLDKVPATGALIVVTWPKVEKGLGFPARAFAILP
Specific function: Unknown
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31825; Mature: 31693
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRTIWRSNISASAGSRPERRGCRHASLYLGALLLVLSSAVASAEPSLTEIQAVLAHKT CCCCCEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH FVDLTHAFSETTPVWEGFPQAKMYPAMKPGTGEPYTIKQDGFRSTFFAMVGQYGTHVDPP HHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCC AHFAEKGATLDQIPLKEMILPLVVFDITPWLDKEPAHVFSLEDLKTWEHEHGRVPEGAFA HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHH ALRTDMGKDFETNPQSFKRQPFPGWSREAVQFLVEQRGIKAIGHESLDSDVTETMETETY HHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHE ILQSGHYQIEVMTNLDKVPATGALIVVTWPKVEKGLGFPARAFAILP EEECCCEEEEEEECCCCCCCCCEEEEEECCCHHHCCCCCHHHEEECC >Mature Secondary Structure ASRTIWRSNISASAGSRPERRGCRHASLYLGALLLVLSSAVASAEPSLTEIQAVLAHKT CCCCEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH FVDLTHAFSETTPVWEGFPQAKMYPAMKPGTGEPYTIKQDGFRSTFFAMVGQYGTHVDPP HHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCC AHFAEKGATLDQIPLKEMILPLVVFDITPWLDKEPAHVFSLEDLKTWEHEHGRVPEGAFA HHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHH ALRTDMGKDFETNPQSFKRQPFPGWSREAVQFLVEQRGIKAIGHESLDSDVTETMETETY HHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHE ILQSGHYQIEVMTNLDKVPATGALIVVTWPKVEKGLGFPARAFAILP EEECCCEEEEEEECCCCCCCCCEEEEEECCCHHHCCCCCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA