| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680155
Identifier: 182680155
GI number: 182680155
Start: 3697089
End: 3698459
Strand: Reverse
Name: 182680155
Synonym: Bind_3252
Alternate gene names: NA
Gene position: 3698459-3697089 (Counterclockwise)
Preceding gene: 182680156
Following gene: 182680153
Centisome position: 88.69
GC content: 49.74
Gene sequence:
>1371_bases GTGATACAGAAGATCTTTGCAGTGTTATCACTATCAGCCAATTTTTGCCTCATGCCGACGGCATTGTCCTTTGCGCAAGA GCAGGACATCGACATGAGCGTCCTTCAGAAGCCCGATATATCGGGTGCAACCAAAGATGTTCAACCTTCTGTGGAAGCTT GTTGGGAAAAATGGAAAAATCAGGAAGGCTTGAAAGAGGGAAAAAATGAGCGCAGCGGTCATCTGGTTCTTTTATCTTAT AGCCAGGAATCGATAAACCAGGAACTAGAAGCGGCAAGTTGGCTCACCGCGCGTAAGCTCGCCTTCGAAACTGCGGAATT GAATGCGCGGGCACAGCTCGCTGGCACAATGGCATCGGAAATCAAATCTGATCGAAGTGTGGCCCAGCGTATGTTTGGTG GCGATGATGCCGCACCCGCGTTAGAGAATACTGTAAAGCAGTTGTCGATAGCCGAAAAAACGCAGGTCCTCGCTGGTAAA GTACTAGATAACGAGATTTCCAAATATGCTCCCGATTGGAATAATGCAGCCTCGACGCAGCAAAAAAGAGAAGCCGTCGT TAAGCTTCAAGCAAAGCTTCAAGAGGATATCGCTGCCCACTCAGAGCTCTATGCCGCTGGAGCATTTACCGTTGCTCAGT GCGAAGGCCAAAGCACTTCAGAAGGCGGGAAATATTCGGTTCTTGTAGGCCTGATCTGGAGCCCGAAATTAGCGAAGATC GCTGAAGCGATTTGGAATCCCAGTCTCAAATTGTCACCTGAGCCACCACAGCATAGTCTTTCAGAACAATTCGCTGCATT CGCCGACGAAAACCCAAATTGGCTCGCTTACACGATGGGAGCCCGTGTTTTCACTGATGAAATGGGAGAACATGTTGTTG TAGGCTTCGGAGTTGCCCCGCAATCTTCTATGATGAGTGTGGACAAAAGGCGAGCTGGCCTTGAAGCTCTTGCTGCAATA CAGCGTTTCGTCGGAGAAAAAGTCGAAGCGAATTCGGAGGAAAACGAGCGTTTTGAACGCAGGGAATATACGAATGGGGA AAGCAGTTCATTCGATACAAGCGCGTTCATCAATAACGTCAAGGCGCGTTCTCAGGACATGAAACTGGCAGGAGTTGCTG AAGTCGCCTCCTGGCGGGGAACACATCCATGGTCCAATGCCAAAATGCAGGTCGTGGCAATGGCGTGGACCCCCAAATGG TCTGTAGATAGTGTTCAGGCTGCTGCTATGATGCAAACAATAGAAAAGCGTATGAATGGGCAGGGCGCCGTACCTGTCTC GTCCTCAGCAGACCCTAAAAAGCGTTATAAAGGATCGGGCTCCGCAGTCCCTGCGCATACTGGGGCTGCTTCTTCTACGC ATGACTTTTAA
Upstream 100 bases:
>100_bases TCGCGGCACAACGACAACTGGAACAACAGCAGCAACAAGATTTACGAAATGCTCAAGCTGTTATGGGAATTATAGGCGGT GTTCTTGGAGGGGTACGGCG
Downstream 100 bases:
>100_bases TAAGTAAGTACCCGCAAATTATTCATTGCACCCATTAAATTGATCGGTTGCCGCCGGGTTGCCCGCGCAAAACAAATCTT CTGTGAAGGCATCTTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MIQKIFAVLSLSANFCLMPTALSFAQEQDIDMSVLQKPDISGATKDVQPSVEACWEKWKNQEGLKEGKNERSGHLVLLSY SQESINQELEAASWLTARKLAFETAELNARAQLAGTMASEIKSDRSVAQRMFGGDDAAPALENTVKQLSIAEKTQVLAGK VLDNEISKYAPDWNNAASTQQKREAVVKLQAKLQEDIAAHSELYAAGAFTVAQCEGQSTSEGGKYSVLVGLIWSPKLAKI AEAIWNPSLKLSPEPPQHSLSEQFAAFADENPNWLAYTMGARVFTDEMGEHVVVGFGVAPQSSMMSVDKRRAGLEALAAI QRFVGEKVEANSEENERFERREYTNGESSSFDTSAFINNVKARSQDMKLAGVAEVASWRGTHPWSNAKMQVVAMAWTPKW SVDSVQAAAMMQTIEKRMNGQGAVPVSSSADPKKRYKGSGSAVPAHTGAASSTHDF
Sequences:
>Translated_456_residues MIQKIFAVLSLSANFCLMPTALSFAQEQDIDMSVLQKPDISGATKDVQPSVEACWEKWKNQEGLKEGKNERSGHLVLLSY SQESINQELEAASWLTARKLAFETAELNARAQLAGTMASEIKSDRSVAQRMFGGDDAAPALENTVKQLSIAEKTQVLAGK VLDNEISKYAPDWNNAASTQQKREAVVKLQAKLQEDIAAHSELYAAGAFTVAQCEGQSTSEGGKYSVLVGLIWSPKLAKI AEAIWNPSLKLSPEPPQHSLSEQFAAFADENPNWLAYTMGARVFTDEMGEHVVVGFGVAPQSSMMSVDKRRAGLEALAAI QRFVGEKVEANSEENERFERREYTNGESSSFDTSAFINNVKARSQDMKLAGVAEVASWRGTHPWSNAKMQVVAMAWTPKW SVDSVQAAAMMQTIEKRMNGQGAVPVSSSADPKKRYKGSGSAVPAHTGAASSTHDF >Mature_456_residues MIQKIFAVLSLSANFCLMPTALSFAQEQDIDMSVLQKPDISGATKDVQPSVEACWEKWKNQEGLKEGKNERSGHLVLLSY SQESINQELEAASWLTARKLAFETAELNARAQLAGTMASEIKSDRSVAQRMFGGDDAAPALENTVKQLSIAEKTQVLAGK VLDNEISKYAPDWNNAASTQQKREAVVKLQAKLQEDIAAHSELYAAGAFTVAQCEGQSTSEGGKYSVLVGLIWSPKLAKI AEAIWNPSLKLSPEPPQHSLSEQFAAFADENPNWLAYTMGARVFTDEMGEHVVVGFGVAPQSSMMSVDKRRAGLEALAAI QRFVGEKVEANSEENERFERREYTNGESSSFDTSAFINNVKARSQDMKLAGVAEVASWRGTHPWSNAKMQVVAMAWTPKW SVDSVQAAAMMQTIEKRMNGQGAVPVSSSADPKKRYKGSGSAVPAHTGAASSTHDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49604; Mature: 49604
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQKIFAVLSLSANFCLMPTALSFAQEQDIDMSVLQKPDISGATKDVQPSVEACWEKWKN CHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCC QEGLKEGKNERSGHLVLLSYSQESINQELEAASWLTARKLAFETAELNARAQLAGTMASE CCHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IKSDRSVAQRMFGGDDAAPALENTVKQLSIAEKTQVLAGKVLDNEISKYAPDWNNAASTQ HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH QKREAVVKLQAKLQEDIAAHSELYAAGAFTVAQCEGQSTSEGGKYSVLVGLIWSPKLAKI HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEECCCHHHHH AEAIWNPSLKLSPEPPQHSLSEQFAAFADENPNWLAYTMGARVFTDEMGEHVVVGFGVAP HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCEEEEEECCCC QSSMMSVDKRRAGLEALAAIQRFVGEKVEANSEENERFERREYTNGESSSFDTSAFINNV CHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH KARSQDMKLAGVAEVASWRGTHPWSNAKMQVVAMAWTPKWSVDSVQAAAMMQTIEKRMNG HHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC QGAVPVSSSADPKKRYKGSGSAVPAHTGAASSTHDF CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIQKIFAVLSLSANFCLMPTALSFAQEQDIDMSVLQKPDISGATKDVQPSVEACWEKWKN CHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCC QEGLKEGKNERSGHLVLLSYSQESINQELEAASWLTARKLAFETAELNARAQLAGTMASE CCHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IKSDRSVAQRMFGGDDAAPALENTVKQLSIAEKTQVLAGKVLDNEISKYAPDWNNAASTQ HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH QKREAVVKLQAKLQEDIAAHSELYAAGAFTVAQCEGQSTSEGGKYSVLVGLIWSPKLAKI HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEECCCHHHHH AEAIWNPSLKLSPEPPQHSLSEQFAAFADENPNWLAYTMGARVFTDEMGEHVVVGFGVAP HHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCEEEEEECCCC QSSMMSVDKRRAGLEALAAIQRFVGEKVEANSEENERFERREYTNGESSSFDTSAFINNV CHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH KARSQDMKLAGVAEVASWRGTHPWSNAKMQVVAMAWTPKWSVDSVQAAAMMQTIEKRMNG HHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC QGAVPVSSSADPKKRYKGSGSAVPAHTGAASSTHDF CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA