| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is yfeJ [H]
Identifier: 182680146
GI number: 182680146
Start: 3687135
End: 3687863
Strand: Reverse
Name: yfeJ [H]
Synonym: Bind_3243
Alternate gene names: 182680146
Gene position: 3687863-3687135 (Counterclockwise)
Preceding gene: 182680147
Following gene: 182680142
Centisome position: 88.43
GC content: 61.18
Gene sequence:
>729_bases ATGGAAGCGACACAAGAAAATCCCAGTAAAATCCTGGTGGTGCTCCATCAGCAGCATTCGACGCCTGGCCGAATCGGCCG GCTTCTGGAGTGTCAGGGCTACCAGCTCGACCTGAGACGGCCGCGCTTTGGCGATCCTCTGCCCGACACTATGCGCGATT ACGCGGCGGCCATCATTTTTGGCGGTCCGATGAGCGCGAATGATGAGGAAGACTGGCTCAAGCGCGAGATCGACTGGATC GGCGTGCCGCTCAAGGAAAACAAGCCCTATCTTGGCATTTGCCTCGGCGCGCAAATGCTTGCCCGCCATCTCGGTCAGAC GGTCTGCCCGCATCCGCAGGGCAAGGTTGAAGCCGGTTATTACCGCATCCATCCGACTGAACAGGGCCATGAGCTCTGCG ACTGCCGGTTCCCTGAAACCGTCTATCAATGGCATCGTGAGGGATTTTGCCTCCCCAAGGGCGCGACCTTGCTCGCCAAA GGGGTGGATTTCGAGGCGCAGGCTTTCCGTTATGGCGAGCGGGCCTACGGGCTTCAATTCCACCCGGAGGTCACGATCTC GATCATGTGCCGCTGGCTCGCCCGCAGCAAGATGCGCCTCAGGCAGCCCAATGCGCGTCCGCCGCACCGGCATTTCCAAG ATTGGTGCCTGCATGATTGGCGGATCGCCCGCTGGTCCGACGCTTTCTTGCGGACCTGGATCGCCGAGGACAGCGCCATC GCGGCGTGA
Upstream 100 bases:
>100_bases CGATTTTGACTTCGCAGATCCTCTTTTGGCTGCTTTTCGGTTCGGCCAACCCTTAAAATAGGCTCGACATTTTTCCATTT TTCTAGTAAATTTGTGGATT
Downstream 100 bases:
>100_bases CATTTGTCAGAGAAGGACAACATCAAACCAAAAGCGGCTGCCGCTTTTGGTTTGAGTTGATGCATTGAGCAACGACATCG AACCTTAATCTTCCGGTGCG
Product: glutamine amidotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MEATQENPSKILVVLHQQHSTPGRIGRLLECQGYQLDLRRPRFGDPLPDTMRDYAAAIIFGGPMSANDEEDWLKREIDWI GVPLKENKPYLGICLGAQMLARHLGQTVCPHPQGKVEAGYYRIHPTEQGHELCDCRFPETVYQWHREGFCLPKGATLLAK GVDFEAQAFRYGERAYGLQFHPEVTISIMCRWLARSKMRLRQPNARPPHRHFQDWCLHDWRIARWSDAFLRTWIAEDSAI AA
Sequences:
>Translated_242_residues MEATQENPSKILVVLHQQHSTPGRIGRLLECQGYQLDLRRPRFGDPLPDTMRDYAAAIIFGGPMSANDEEDWLKREIDWI GVPLKENKPYLGICLGAQMLARHLGQTVCPHPQGKVEAGYYRIHPTEQGHELCDCRFPETVYQWHREGFCLPKGATLLAK GVDFEAQAFRYGERAYGLQFHPEVTISIMCRWLARSKMRLRQPNARPPHRHFQDWCLHDWRIARWSDAFLRTWIAEDSAI AA >Mature_242_residues MEATQENPSKILVVLHQQHSTPGRIGRLLECQGYQLDLRRPRFGDPLPDTMRDYAAAIIFGGPMSANDEEDWLKREIDWI GVPLKENKPYLGICLGAQMLARHLGQTVCPHPQGKVEAGYYRIHPTEQGHELCDCRFPETVYQWHREGFCLPKGATLLAK GVDFEAQAFRYGERAYGLQFHPEVTISIMCRWLARSKMRLRQPNARPPHRHFQDWCLHDWRIARWSDAFLRTWIAEDSAI AA
Specific function: Unknown
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: NA
Molecular weight: Translated: 27976; Mature: 27976
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEATQENPSKILVVLHQQHSTPGRIGRLLECQGYQLDLRRPRFGDPLPDTMRDYAAAIIF CCCCCCCCCEEEEEEECCCCCHHHHHHEEECCCCEEECCCCCCCCCCCHHHHHHHEEEEE GGPMSANDEEDWLKREIDWIGVPLKENKPYLGICLGAQMLARHLGQTVCPHPQGKVEAGY CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCEECCE YRIHPTEQGHELCDCRFPETVYQWHREGFCLPKGATLLAKGVDFEAQAFRYGERAYGLQF EEECCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHCCCHHCCEEE HPEVTISIMCRWLARSKMRLRQPNARPPHRHFQDWCLHDWRIARWSDAFLRTWIAEDSAI CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCC AA CC >Mature Secondary Structure MEATQENPSKILVVLHQQHSTPGRIGRLLECQGYQLDLRRPRFGDPLPDTMRDYAAAIIF CCCCCCCCCEEEEEEECCCCCHHHHHHEEECCCCEEECCCCCCCCCCCHHHHHHHEEEEE GGPMSANDEEDWLKREIDWIGVPLKENKPYLGICLGAQMLARHLGQTVCPHPQGKVEAGY CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCEECCE YRIHPTEQGHELCDCRFPETVYQWHREGFCLPKGATLLAKGVDFEAQAFRYGERAYGLQF EEECCCCCCCCHHCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHCCCHHCCEEE HPEVTISIMCRWLARSKMRLRQPNARPPHRHFQDWCLHDWRIARWSDAFLRTWIAEDSAI CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]